Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold594G53100 Striga asiatica HOM05D004804 ORTHO05D005882 2.7e-109 398.7 199 100.0
Medtr7g100345 Medicago truncatula HOM05D004804 ORTHO05D005882 2.8e-13 79.7 70 55.7
Ca_07739_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 1.1e-12 77.8 70 55.7
SGA_v2.0_scaffold126G33837 Striga asiatica HOM05D004804 ORTHO05D005882 1.4e-12 77.4 58 63.8
Lalb_Chr25g0289471 Lupinus albus HOM05D004804 ORTHO05D005882 1.8e-12 77.0 61 60.7
Lalb_Chr20g0113121 Lupinus albus HOM05D004804 ORTHO05D005882 4.0e-12 75.9 61 59.0
Migut.L01624 Erythranthe guttata HOM05D004804 ORTHO05D005882 6.8e-12 75.1 58 62.1
FvH4_6g14490 Fragaria vesca HOM05D004804 ORTHO05D005882 6.8e-12 75.1 58 62.1
FAN14G5408 Fragaria x ananassa HOM05D004804 ORTHO05D005882 6.8e-12 75.1 58 62.1
Psat3g121680 Pisum sativum HOM05D004804 ORTHO05D005882 6.8e-12 75.1 70 52.9
TPR.G21455 Trifolium pratense HOM05D004804 ORTHO05D005882 6.8e-12 75.1 70 54.3
Prupe.6G249100 Prunus persica HOM05D004804 ORTHO05D005882 8.9e-12 74.7 102 45.1
Sed0001519 Sechium edule HOM05D004804 ORTHO05D005882 8.9e-12 74.7 70 54.3
Nitab4.5_0005039g0030 Nicotiana tabacum HOM05D004804 ORTHO05D005882 1.2e-11 74.3 61 59.0
Nitab4.5_0002995g0070 Nicotiana tabacum HOM05D004804 ORTHO05D005882 1.5e-11 73.9 61 60.7
Nitab4.5_0004851g0050 Nicotiana tabacum HOM05D004804 ORTHO05D005882 2.0e-11 73.6 57 63.2
RcHm_v2.0_Chr3g0467571 Rosa chinensis HOM05D004804 ORTHO05D005882 2.6e-11 73.2 58 60.3
CAN.G125.11 Capsicum annuum HOM05D004804 ORTHO05D005882 3.4e-11 72.8 61 59.0
FAN02G1589 Fragaria x ananassa HOM05D004804 ORTHO05D005882 3.4e-11 72.8 58 60.3
FAN09G0808 Fragaria x ananassa HOM05D004804 ORTHO05D005882 4.4e-11 72.4 58 60.3
Lsat_1_v5_gn_2_111181 Lactuca sativa HOM05D004804 ORTHO05D005882 4.4e-11 72.4 58 58.6
Peaxi162Scf00039g00093 Petunia axillaris HOM05D004804 ORTHO05D005882 4.4e-11 72.4 61 57.4
Ca_08795_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 9.8e-11 71.2 70 51.4
CsaV3_4G024670 Cucumis sativus L. HOM05D004804 ORTHO05D005882 1.7e-10 70.5 61 57.4
TWI53G1005 Tripterygium wilfordii HOM05D004804 ORTHO05D005882 1.7e-10 70.5 55 63.6
CiPaw.09G187800 Carya illinoinensis HOM05D004804 ORTHO05D005882 2.2e-10 70.1 44 70.5
Solyc09g005700.3 Solanum lycopersicum HOM05D004804 ORTHO05D005882 2.2e-10 70.1 57 57.9
Sopen09g001590 Solanum pennellii HOM05D004804 ORTHO05D005882 2.2e-10 70.1 57 57.9
arahy.Tifrunner.gnm1.ann1.EYL599 Arachis hypogaea HOM05D004804 ORTHO05D005882 3.7e-10 69.3 70 51.4
Lj2A100T74 Lonicera japonica HOM05D004804 ORTHO05D005882 3.7e-10 69.3 58 58.6
Lj1g0023900 Lotus japonicus HOM05D004804 ORTHO05D005882 3.7e-10 69.3 70 51.4
MSTRG.5692 Avicennia marina HOM05D004804 ORTHO05D005882 4.9e-10 68.9 61 50.8
Cc06_g03070 Coffea canephora HOM05D004804 ORTHO05D005882 4.9e-10 68.9 77 46.8
MELO3C003100.2 Cucumis melo HOM05D004804 ORTHO05D005882 4.9e-10 68.9 61 55.7
HanXRQChr14g0453791 Helianthus annuus HOM05D004804 ORTHO05D005882 6.4e-10 68.6 58 53.4
PSO339G6548 Papaver somniferum HOM05D004804 ORTHO05D005882 6.4e-10 68.6 71 46.5
PSO384G4865 Papaver somniferum HOM05D004804 ORTHO05D005882 6.4e-10 68.6 71 46.5
MD12G1136700 Malus domestica HOM05D004804 ORTHO05D005882 8.3e-10 68.2 58 58.6
Actinidia05292 Actinidia chinensis HOM05D004804 ORTHO05D005882 1.1e-09 67.8 70 50.0
Migut.J00372 Erythranthe guttata HOM05D004804 ORTHO05D005882 1.1e-09 67.8 71 47.9
Glyma.19G174300 Glycine max HOM05D004804 ORTHO05D005882 1.1e-09 67.8 70 50.0
ClCG04G008480 Citrullus lanatus HOM05D004804 ORTHO05D005882 1.4e-09 67.4 70 50.0
Oeu029811.2 Olea europaea HOM05D004804 ORTHO05D005882 1.4e-09 67.4 61 52.5
MD04G1119400 Malus domestica HOM05D004804 ORTHO05D005882 1.9e-09 67.0 58 56.9
Ciclev10012025m.g Citrus clementina HOM05D004804 ORTHO05D005882 2.4e-09 66.6 77 49.4
Duzib093G1125 Durio zibethinus HOM05D004804 ORTHO05D005882 2.4e-09 66.6 58 56.9
SalBow1G1981 Salvia bowleyana HOM05D004804 ORTHO05D005882 2.4e-09 66.6 58 53.4
Sc01g0003910 Simmondsia chinensis HOM05D004804 ORTHO05D005882 2.4e-09 66.6 77 49.4
Thecc.05G045900 Theobroma cacao HOM05D004804 ORTHO05D005882 2.4e-09 66.6 58 56.9
Eucgr.K03171 Eucalyptus grandis HOM05D004804 ORTHO05D005882 3.2e-09 66.2 77 49.4
SalBow4G1685 Salvia bowleyana HOM05D004804 ORTHO05D005882 3.2e-09 66.2 58 53.4
ECA238G1409 Erigeron canadensis HOM05D004804 ORTHO05D005882 4.1e-09 65.9 58 53.4
GSVIVG01025612001 Vitis vinifera HOM05D004804 ORTHO05D005882 4.1e-09 65.9 58 55.2
Gorai.009G423800 Gossypium raimondii HOM05D004804 ORTHO05D005882 5.4e-09 65.5 64 53.1
Glyma.03G173400 Glycine max HOM05D004804 ORTHO05D005882 7.0e-09 65.1 70 50.0
Phvul.001G170900 Phaseolus vulgaris HOM05D004804 ORTHO05D005882 7.0e-09 65.1 70 48.6
unitig_27.g24899 Utricularia gibba HOM05D002116 ORTHO05D005882 7.0e-09 65.1 55 58.2
Cfa017439 Carpinus fangiana HOM05D004804 ORTHO05D005882 9.2e-09 64.7 77 49.4
Gohir.A04G079400 Gossypium hirsutum HOM05D004804 ORTHO05D005882 9.2e-09 64.7 61 54.1
Gohir.D04G118600 Gossypium hirsutum HOM05D004804 ORTHO05D005882 9.2e-09 64.7 61 54.1
Potri.016G120900 Populus trichocarpa HOM05D004804 ORTHO05D005882 9.2e-09 64.7 55 58.2
Haze_20724 Corylus avellana HOM05D004804 ORTHO05D005882 1.2e-08 64.3 77 49.4
VMungo1383G1812 Vigna mungo HOM05D004804 ORTHO05D005882 1.2e-08 64.3 70 48.6
CANSAT80G2153 Cannabis sativa HOM05D004804 ORTHO05D005882 1.6e-08 63.9 58 53.4
Hma1.2p1_1481F.1_g286070 Hydrangea macrophylla HOM05D004804 ORTHO05D005882 1.6e-08 63.9 77 46.8
PGR004G0439 Punica granatum HOM05D004804 ORTHO05D005882 1.6e-08 63.9 58 55.2
Potri.006G102700 Populus trichocarpa HOM05D004804 ORTHO05D005882 2.0e-08 63.5 58 53.4
vmacro20115 Vaccinium macrocarpon HOM05D004804 ORTHO05D005882 2.0e-08 63.5 77 45.5
COL.COLO4_14869 Corchorus olitorius HOM05D004804 ORTHO05D005882 2.7e-08 63.2 58 53.4
Thhalv10016845m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 2.7e-08 63.2 57 57.9
QL07p046693 Quercus lobata HOM05D004804 ORTHO05D005882 3.5e-08 62.8 58 51.7
TAR623G1260 Trochodendron aralioides HOM05D004804 ORTHO05D005882 3.5e-08 62.8 71 43.7
Atru.chr8.1921 Acer truncatum HOM05D004804 ORTHO05D005882 4.6e-08 62.4 77 46.8
CDE08G0350 Ceratophyllum demersum HOM05D004804 ORTHO05D005882 4.6e-08 62.4 58 55.2
Sabra06G0079000 Salix brachista HOM05D004804 ORTHO05D005882 4.6e-08 62.4 58 51.7
Aa31LG5G22830 Aethionema arabicum HOM05D004804 ORTHO05D005882 6.0e-08 62.0 58 55.2
AL5G34510 Arabidopsis lyrata HOM05D004804 ORTHO05D005882 6.0e-08 62.0 77 48.1
AT3G53580 Arabidopsis thaliana HOM05D004804 ORTHO05D005882 6.0e-08 62.0 77 48.1
C04p10610 Brassica napus HOM05D004804 ORTHO05D005882 7.8e-08 61.6 58 55.2
BolC4t22652H Brassica oleracea HOM05D004804 ORTHO05D005882 7.8e-08 61.6 58 55.2
Dinv37213 Davidia involucrata HOM05D004804 ORTHO05D005882 7.8e-08 61.6 77 45.5
CARHR163490 Cardamine hirsuta HOM05D004804 ORTHO05D005882 1.0e-07 61.2 77 48.1
AUR62038459 Chenopodium quinoa HOM05D004804 ORTHO05D005882 1.0e-07 61.2 55 50.9
THA.LOC104806587 Tarenaya hassleriana HOM05D004804 ORTHO05D005882 1.0e-07 61.2 57 54.4
Actinidia19758 Actinidia chinensis HOM05D004804 ORTHO05D001149 1.3e-07 60.8 77 44.2
EL10Ac2g02842 Beta vulgaris HOM05D004804 ORTHO05D005882 1.3e-07 60.8 55 56.4
CSS0039312 Camellia sinensis var. sinensis HOM05D004804 ORTHO05D001149 1.3e-07 60.8 58 50.0
A05p08530 Brassica napus HOM05D004804 ORTHO05D005882 1.7e-07 60.5 58 53.4
BraA05t19821Z Brassica rapa HOM05D004804 ORTHO05D005882 2.3e-07 60.1 58 53.4
Cpa.g.c31068.3 Carica papaya HOM05D004804 ORTHO05D005882 2.3e-07 60.1 58 51.7
Manes.08G076545 Manihot esculenta HOM05D004804 ORTHO05D005882 2.3e-07 60.1 58 50.0
Hund13338 Selenicereus undatus HOM05D004804 ORTHO05D005882 2.3e-07 60.1 55 52.7
Carub.0005s2015 Capsella rubella HOM05D004804 ORTHO05D005882 3.0e-07 59.7 77 46.8
BcaB01g00261 Brassica carinata HOM05D004804 ORTHO05D005882 3.9e-07 59.3 58 53.4
BcaC07g39720 Brassica carinata HOM05D004804 ORTHO05D005882 3.9e-07 59.3 58 53.4
BcaNung07017 Brassica carinata HOM05D004804 ORTHO05D005882 3.9e-07 59.3 58 53.4
C08p28920 Brassica napus HOM05D004804 ORTHO05D005882 3.9e-07 59.3 58 53.4
DCAR_009258 Daucus carota HOM05D004804 ORTHO05D005882 3.9e-07 59.3 70 45.7
Thhalv10010477m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 3.9e-07 59.3 77 46.8
Rhsim05G0187300 Rhododendron simsii HOM05D004804 ORTHO05D005882 3.9e-07 59.3 70 45.7
Sp5g08760 Schrenkiella parvula HOM05D004804 ORTHO05D005882 3.9e-07 59.3 58 53.4
A09p46600 Brassica napus HOM05D004804 ORTHO05D005882 5.0e-07 58.9 58 51.7
BraA09t40124Z Brassica rapa HOM05D004804 ORTHO05D005882 5.0e-07 58.9 58 51.7
Nn2g12889 Nelumbo nucifera HOM05D004804 ORTHO05D005882 5.0e-07 58.9 58 46.6
BcaB02g07773 Brassica carinata HOM05D004804 ORTHO05D005882 6.6e-07 58.5 77 46.8
BolC8t50494H Brassica oleracea HOM05D004804 ORTHO05D005882 6.6e-07 58.5 55 56.4
AUR62037218 Chenopodium quinoa HOM05D004804 ORTHO05D005882 6.6e-07 58.5 55 50.9
Aqoxy4G03017 Aquilegia oxysepala HOM05D004804 ORTHO05D005882 8.6e-07 58.2 57 52.6
A07p21740 Brassica napus HOM05D004804 ORTHO05D005882 1.1e-06 57.8 58 51.7
BraA07t29856Z Brassica rapa HOM05D004804 ORTHO05D005882 1.1e-06 57.8 58 51.7
Sp4g19750 Schrenkiella parvula HOM05D004804 ORTHO05D005882 1.1e-06 57.8 58 51.7
AUR62014235 Chenopodium quinoa HOM05D004804 ORTHO05D005882 1.5e-06 57.4 43 58.1
Ah.10g030750 Amaranthus hybridus HOM05D004804 ORTHO05D005882 1.9e-06 57.0 55 54.5
BcaC08g44637 Brassica carinata HOM05D004804 ORTHO05D005882 2.5e-06 56.6 77 45.5
C06p21540 Brassica napus HOM05D004804 ORTHO05D005882 2.5e-06 56.6 77 45.5
BolC6t37342H Brassica oleracea HOM05D004804 ORTHO05D005882 2.5e-06 56.6 77 45.5
AUR62026834 Chenopodium quinoa HOM05D004804 ORTHO05D005882 2.5e-06 56.6 55 49.1
Zm00001eb136710 Zea mays HOM05D004804 ORTHO05D005882 4.3e-06 55.8 57 47.4
HPP92_019459 Vanilla planifolia HOM05D004804 ORTHO05D005882 9.5e-06 54.7 61 49.2


User provided reference genes

Program Settings