Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.9e-251 872.1 453 100.0
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 5.7e-208 727.6 453 82.3
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 4.0e-201 704.9 453 80.1
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 4.9e-183 644.8 451 72.1
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 7.6e-168 594.3 466 67.4
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 3.8e-167 592.0 453 69.8
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 7.1e-166 587.8 459 67.8
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 2.1e-165 586.3 473 64.9
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 3.5e-165 585.5 459 67.3
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 7.9e-165 584.3 419 73.3
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 7.9e-165 584.3 458 67.5
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.3e-164 583.6 471 65.4
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 2.3e-164 582.8 463 65.0
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 5.6e-163 578.2 471 64.3
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 9.6e-163 577.4 467 63.8
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 2.1e-162 576.2 458 65.9
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 4.8e-162 575.1 458 64.0
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 1.1e-161 573.9 460 64.6
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 1.1e-161 573.9 449 66.8
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 2.4e-161 572.8 455 65.3
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 6.9e-161 571.2 455 65.7
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 9.0e-161 570.9 457 65.4
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 9.0e-161 570.9 469 65.9
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.2e-160 570.5 457 65.2
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 2.0e-160 569.7 467 65.1
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 3.4e-160 568.9 469 65.2
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 5.8e-160 568.2 464 64.2
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 9.9e-160 567.4 462 64.7
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 1.3e-159 567.0 467 64.0
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.7e-159 566.6 496 61.7
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 3.8e-159 565.5 488 61.9
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 4.9e-159 565.1 461 63.1
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 6.4e-159 564.7 497 62.4
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.1e-158 563.9 463 64.1
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.9e-158 563.1 464 64.0
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 9.3e-158 560.8 467 63.4
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 9.3e-158 560.8 463 63.9
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 1.2e-157 560.5 486 61.5
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.6e-157 560.1 461 64.2
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.6e-157 560.1 483 62.3
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 2.1e-157 559.7 496 62.1
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.7e-157 559.3 460 64.6
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 7.9e-157 557.8 459 63.4
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 1.0e-156 557.4 468 65.0
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.0e-156 557.4 449 64.4
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 1.3e-156 557.0 458 63.5
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 8.7e-156 554.3 469 63.8
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 8.7e-156 554.3 469 63.8
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.1e-155 553.9 471 63.1
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 3.3e-155 552.4 460 63.5
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 9.6e-155 550.8 462 63.6
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 2.8e-154 549.3 469 64.2
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 3.7e-154 548.9 471 62.6
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 3.7e-154 548.9 462 62.6
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 6.2e-154 548.1 454 62.6
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.1e-153 547.4 464 62.5
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.4e-153 547.0 454 62.3
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.4e-153 547.0 465 62.2
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 1.8e-153 546.6 470 60.6
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 5.3e-153 545.0 452 61.9
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 9.0e-153 544.3 454 61.9
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 1.5e-152 543.5 461 61.8
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 2.0e-152 543.1 464 62.1
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 2.0e-152 543.1 453 61.1
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 4.5e-152 542.0 461 61.8
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 1.0e-151 540.8 454 61.7
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.0e-151 540.8 466 62.0
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 2.9e-151 539.3 433 64.7
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 4.9e-151 538.5 471 59.4
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 3.2e-150 535.8 463 61.1
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 4.2e-150 535.4 464 60.1
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 1.3e-148 530.4 487 61.4
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.5e-147 526.9 464 58.8
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 5.7e-147 525.0 464 61.0
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 7.4e-147 524.6 465 60.9
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 6.9e-145 518.1 410 64.9
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 1.2e-144 517.3 462 58.4
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 1.5e-144 516.9 426 64.3
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 2.6e-144 516.2 476 58.6
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 3.4e-144 515.8 462 58.7
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 3.8e-143 512.3 466 57.3
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.2e-141 507.3 476 56.3
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 9.1e-137 491.1 487 54.0
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 3.4e-136 489.2 375 66.9
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 1.3e-135 487.3 465 57.2
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.3e-135 487.3 425 62.4
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.1e-134 484.2 469 57.6
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.0e-132 477.6 465 55.5
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 5.7e-131 471.9 373 64.1
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 1.3e-130 470.7 468 56.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 3.3e-123 446.0 463 52.1
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 2.2e-122 443.4 473 51.0
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 4.8e-122 442.2 473 50.7
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 1.3e-119 434.1 358 63.7
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 4.4e-115 419.1 321 68.5
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 3.7e-114 416.0 322 66.8
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 2.0e-112 410.2 475 46.5
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 2.2e-111 406.8 331 65.6
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.0e-105 385.2 314 63.4
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.2e-101 374.4 316 63.6
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 6.8e-100 368.6 329 59.9
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 9.8e-99 364.8 514 46.1
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 8.0e-93 345.1 365 53.2
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 7.5e-83 312.0 489 38.0
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.6e-80 304.3 267 61.4
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 1.1e-78 298.1 220 67.3
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 7.3e-78 295.4 349 49.6
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 8.1e-77 292.0 304 53.6
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 8.6e-71 271.9 427 37.9
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 1.5e-62 244.6 493 33.7
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 5.6e-62 242.7 353 45.0
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 4.6e-48 196.4 484 32.6
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.1e-46 191.8 156 64.1
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 6.7e-39 166.0 194 51.0
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 2.9e-34 150.6 494 27.1
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.5e-27 128.3 128 57.8
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 4.5e-27 126.7 363 33.9
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 8.5e-26 122.5 141 51.1
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 9.4e-25 119.0 401 25.9
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.2e-24 118.6 83 69.9
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-21 107.5 429 25.9
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 3.4e-19 100.5 100 55.0
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 7.7e-19 99.4 81 56.8
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 7.7e-19 99.4 81 55.6
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 1.3e-18 98.6 82 58.5
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 7.9e-16 89.4 100 51.0
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 3.6e-08 63.9 170 35.9
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 2.3e-07 61.2 75 40.0
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 2.0e-06 58.2 75 38.7
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 7.4e-06 56.2 40 67.5


User provided reference genes

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