Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 1.5e-273 945.7 516 100.0
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 8.6e-184 647.5 518 69.3
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 3.4e-180 635.6 519 70.7
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 2.5e-175 619.4 521 68.3
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 6.2e-174 614.8 519 69.0
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.3e-168 597.0 523 62.3
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 3.3e-167 592.4 524 63.5
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 3.3e-167 592.4 479 67.4
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.4e-165 586.3 481 66.9
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 2.4e-165 586.3 525 63.0
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 4.4e-164 582.0 525 62.3
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.8e-158 562.8 526 62.0
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.1e-157 560.8 505 62.8
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.7e-155 553.5 481 63.4
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 2.2e-155 553.1 497 63.2
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 3.2e-154 549.3 471 63.7
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 1.6e-153 547.0 480 65.0
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 1.3e-152 543.9 475 61.5
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 8.7e-152 541.2 485 63.5
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 1.1e-151 540.8 520 61.2
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.5e-151 540.4 478 62.8
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 1.9e-151 540.0 479 63.7
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.9e-151 540.0 476 61.3
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 3.3e-151 539.3 479 63.7
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 9.6e-151 537.7 465 65.8
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.6e-150 537.0 477 64.2
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 6.2e-150 535.0 471 63.1
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 8.1e-150 534.6 523 59.7
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.1e-149 534.3 482 63.1
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.4e-149 533.1 470 63.4
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 5.3e-149 531.9 505 61.2
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 9.0e-149 531.2 505 61.2
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 3.4e-148 529.3 492 63.2
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 5.8e-148 528.5 497 61.0
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 7.6e-148 528.1 413 68.0
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 3.8e-147 525.8 519 59.7
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 4.9e-147 525.4 525 58.9
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 6.4e-147 525.0 479 61.4
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 9.3e-146 521.2 516 60.7
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.6e-145 520.4 468 63.0
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 2.7e-145 519.6 517 59.2
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 4.6e-145 518.8 469 61.8
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 4.6e-145 518.8 528 58.1
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 6.0e-145 518.5 462 63.2
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 3.0e-144 516.2 449 63.5
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.1e-143 514.2 497 60.6
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 1.5e-143 513.8 390 68.5
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 1.3e-142 510.8 505 58.0
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 1.6e-142 510.4 529 57.7
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 1.6e-142 510.4 487 60.0
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 4.8e-142 508.8 549 56.6
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.4e-141 507.3 549 56.5
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 1.4e-141 507.3 521 57.8
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 2.4e-141 506.5 522 56.3
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 2.4e-141 506.5 510 57.1
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 5.3e-141 505.4 484 62.0
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.2e-140 504.2 511 59.1
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 5.8e-140 501.9 509 57.0
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 5.8e-140 501.9 510 57.3
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.0e-139 501.1 521 55.5
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.0e-139 501.1 521 55.5
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.3e-139 500.7 522 56.9
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 8.4e-139 498.0 510 56.9
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 4.2e-138 495.7 476 58.6
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 7.1e-138 495.0 493 58.6
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 7.1e-138 495.0 516 55.6
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.2e-137 494.2 518 56.9
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 1.0e-136 491.1 415 65.1
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.3e-136 490.0 523 56.6
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 3.9e-136 489.2 541 53.4
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 6.7e-136 488.4 521 57.4
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 6.7e-136 488.4 472 58.5
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.1e-135 487.6 522 55.4
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 1.5e-135 487.3 531 56.5
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 1.9e-135 486.9 452 61.1
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 2.8e-134 483.0 520 54.8
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 2.8e-134 483.0 518 54.6
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 3.7e-134 482.6 510 55.7
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 4.8e-134 482.3 503 56.3
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 6.3e-134 481.9 509 55.4
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.1e-133 481.1 478 58.2
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 1.2e-132 477.6 488 56.6
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 2.0e-132 476.9 512 54.9
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 2.0e-132 476.9 391 64.7
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.0e-132 476.9 473 58.1
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 2.6e-132 476.5 523 54.5
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 3.4e-132 476.1 566 52.8
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 7.7e-132 474.9 528 53.6
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 7.7e-132 474.9 528 53.6
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 2.2e-131 473.4 523 54.1
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 8.5e-131 471.5 542 52.4
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 9.4e-130 468.0 535 53.3
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.2e-129 467.6 409 60.6
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 3.6e-129 466.1 524 54.6
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 6.7e-128 461.8 405 62.2
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 6.7e-128 461.8 457 54.9
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 5.3e-125 452.2 475 53.9
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.5e-124 449.1 413 60.8
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.9e-124 448.7 412 61.2
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.7e-123 447.2 410 55.9
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 2.9e-123 446.4 518 53.1
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 8.5e-123 444.9 413 58.8
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 2.5e-122 443.4 389 60.9
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 1.1e-117 427.9 393 59.0
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 5.5e-114 415.6 369 62.9
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 2.1e-113 413.7 427 56.0
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.3e-112 410.2 403 58.8
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.1e-109 401.4 400 58.5
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.3e-107 394.4 380 57.6
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 6.5e-107 392.1 479 52.2
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 7.7e-100 368.6 527 45.2
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 2.1e-97 360.5 354 60.2
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 5.7e-95 352.4 401 54.4
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.7e-94 349.7 313 60.1
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 1.0e-88 331.6 532 41.2
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.4e-87 326.6 320 60.0
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.3e-83 314.7 466 41.0
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 2.1e-81 307.4 290 56.6
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 2.8e-81 307.0 277 61.4
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 3.6e-81 306.6 277 61.4
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 4.1e-77 293.1 307 56.4
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 7.3e-74 282.3 368 50.5
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 2.3e-72 277.3 270 61.1
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.2e-70 270.8 233 59.7
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 5.1e-67 259.6 514 37.2
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 8.6e-59 232.3 320 49.4
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 7.3e-58 229.2 630 33.7
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 1.8e-56 224.6 468 37.0
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.1e-53 215.3 177 63.8
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.1e-45 188.7 159 61.6
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 4.2e-45 186.8 187 62.0
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 7.3e-42 176.0 143 62.2
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 4.8e-41 173.3 163 60.7
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 1.1e-34 152.1 180 57.2
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 2.0e-31 141.4 109 66.1
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 1.3e-27 128.6 107 65.4
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 1.3e-27 128.6 107 65.4
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 2.0e-23 114.8 165 46.7
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.9e-22 110.9 126 48.4
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 8.7e-19 99.4 118 53.4
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 5.3e-16 90.1 95 55.8
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.4e-15 87.4 88 58.0
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 1.3e-14 85.5 196 38.8
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 5.0e-14 83.6 107 57.0
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 1.6e-12 78.6 57 63.2
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 1.6e-12 78.6 98 45.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 2.1e-12 78.2 107 43.9
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 3.6e-12 77.4 75 53.3
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.0e-11 75.9 70 57.1
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.1e-10 72.4 149 36.2
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 5.3e-08 63.5 195 28.2
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.9e-06 57.8 43 67.4
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.8e-06 57.4 143 32.9
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 8.5e-06 56.2 131 38.2


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