Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 4.3e-212 741.1 387 100.0
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.3e-188 661.8 386 90.7
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 3.0e-72 276.6 407 48.2
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 2.4e-61 240.4 421 41.6
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 3.1e-61 240.0 314 51.6
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 6.5e-59 232.3 421 43.2
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 2.2e-54 217.2 429 40.1
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 6.5e-51 205.7 412 39.1
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 7.9e-49 198.7 422 36.0
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.3e-48 197.2 425 36.9
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 3.3e-47 193.4 463 36.5
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 7.4e-47 192.2 431 38.5
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 9.1e-45 185.3 422 39.3
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 3.8e-43 179.9 423 37.8
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 3.8e-43 179.9 428 35.7
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 3.2e-42 176.8 472 34.3
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 1.6e-41 174.5 423 38.3
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 1.4e-40 171.4 457 33.7
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 2.3e-40 170.6 465 33.8
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 2.3e-40 170.6 441 33.8
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 5.2e-40 169.5 417 34.8
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 8.8e-40 168.7 457 34.6
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 2.0e-39 167.5 424 35.6
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 2.6e-39 167.2 424 34.4
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 3.3e-39 166.8 406 36.9
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 4.4e-39 166.4 421 34.0
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 4.4e-39 166.4 429 33.8
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.7e-38 164.5 440 33.6
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 2.2e-38 164.1 426 33.3
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 3.7e-38 163.3 449 32.7
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 1.8e-37 161.0 415 32.8
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 4.1e-37 159.8 424 34.2
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 2.6e-36 157.1 376 34.6
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.6e-36 157.1 198 47.5
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 3.5e-36 156.8 418 34.7
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 5.9e-36 156.0 425 34.6
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 2.2e-35 154.1 440 34.5
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 5.0e-35 152.9 414 34.5
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 1.9e-34 151.0 433 33.3
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 2.5e-34 150.6 297 41.4
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 4.2e-34 149.8 452 31.2
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 4.2e-34 149.8 439 32.8
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 5.5e-34 149.4 354 35.9
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 5.5e-34 149.4 363 35.3
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.2e-33 148.3 411 33.8
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 1.6e-33 147.9 421 34.2
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 3.6e-33 146.7 482 31.3
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 4.7e-33 146.4 397 32.2
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 4.7e-33 146.4 437 32.7
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 6.1e-33 146.0 421 31.6
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 6.1e-33 146.0 412 32.8
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 8.0e-33 145.6 422 32.7
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 8.0e-33 145.6 411 34.3
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 8.0e-33 145.6 425 34.4
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 1.0e-32 145.2 406 33.5
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 1.4e-32 144.8 479 31.9
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.8e-32 144.4 437 33.0
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 3.0e-32 143.7 437 33.9
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 3.0e-32 143.7 407 33.4
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 4.0e-32 143.3 394 34.0
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 4.0e-32 143.3 376 35.1
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 4.0e-32 143.3 377 32.4
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 4.0e-32 143.3 411 35.3
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 5.2e-32 142.9 374 31.0
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 6.8e-32 142.5 394 34.0
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.8e-32 142.5 411 32.6
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.5e-31 141.4 394 33.8
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.4e-31 140.2 444 32.7
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 3.4e-31 140.2 422 32.9
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.7e-30 137.9 417 31.7
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.7e-30 137.9 417 31.7
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 2.2e-30 137.5 419 32.7
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 6.3e-30 136.0 330 36.4
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 2.4e-29 134.0 427 30.9
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 4.1e-29 133.3 439 33.0
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 9.1e-29 132.1 394 33.2
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 9.1e-29 132.1 394 33.2
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 4.5e-28 129.8 419 32.2
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 7.7e-28 129.0 399 32.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 7.7e-28 129.0 377 32.6
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 5.0e-27 126.3 454 30.8
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 6.5e-27 125.9 409 31.5
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 8.5e-27 125.6 393 32.8
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 4.2e-26 123.2 400 31.2
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 5.5e-26 122.9 395 32.2
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 9.4e-26 122.1 450 27.6
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 6.1e-25 119.4 419 30.3
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.0e-24 118.6 435 30.1
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 2.6e-23 114.0 441 27.4
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 7.5e-23 112.5 412 30.3
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.3e-22 111.7 318 31.4
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 2.8e-22 110.5 413 31.0
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 4.8e-22 109.8 389 30.3
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 3.1e-21 107.1 144 44.4
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 4.1e-21 106.7 369 29.8
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 4.5e-20 103.2 158 40.5
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 3.8e-19 100.1 464 28.9
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 1.6e-17 94.7 436 25.7
unitig_46.g18247 Utricularia gibba HOM05D006668 ORTHO05D008252 3.0e-16 90.5 444 27.3
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 8.9e-16 89.0 181 40.3
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.2e-15 88.6 279 34.1
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 1.2e-15 88.6 429 26.6
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 1.7e-14 84.7 155 36.1
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.9e-14 83.2 120 47.5
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.9e-14 83.2 120 47.5
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 4.4e-07 60.1 302 26.8
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 4.9e-06 56.6 160 30.0
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 6.4e-06 56.2 124 36.3


User provided reference genes

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