Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20501 Striga asiatica HOM05D004721 ORTHO05D403533 9.7e-61 236.5 109 100.0
Dinv42038 Davidia involucrata HOM05D004721 ORTHO05D005765 6.4e-12 74.3 81 51.9
Oeu020727.1 Olea europaea HOM05D004721 ORTHO05D005765 1.4e-11 73.2 92 46.7
SGA_v2.0_scaffold32G13194 Striga asiatica HOM05D004721 ORTHO05D005765 7.0e-11 70.9 90 47.8
CSS0047334 Camellia sinensis var. sinensis HOM05D004721 ORTHO05D005765 1.2e-10 70.1 96 46.9
CSS0049052 Camellia sinensis var. sinensis HOM05D004721 ORTHO05D005765 1.2e-10 70.1 96 46.9
Migut.B00208 Erythranthe guttata HOM05D004721 ORTHO05D005765 1.2e-10 70.1 92 45.7
Gohir.D02G218100 Gossypium hirsutum HOM05D004721 ORTHO05D005765 1.6e-10 69.7 90 50.0
Gohir.A03G196800 Gossypium hirsutum HOM05D004721 ORTHO05D005765 2.0e-10 69.3 90 48.9
Lj5A193T104 Lonicera japonica HOM05D004721 ORTHO05D005765 3.5e-10 68.6 92 45.7
Manes.04G087050 Manihot esculenta HOM05D004721 ORTHO05D005765 3.5e-10 68.6 92 44.6
Nn5g28946 Nelumbo nucifera HOM05D004721 ORTHO05D005765 3.5e-10 68.6 92 46.7
Gorai.005G246000 Gossypium raimondii HOM05D004721 ORTHO05D005765 4.6e-10 68.2 90 48.9
Actinidia00549 Actinidia chinensis HOM05D004721 ORTHO05D005765 6.0e-10 67.8 92 45.7
Oeu046144.1 Olea europaea HOM05D004721 ORTHO05D005765 6.0e-10 67.8 92 43.5
SalBow6G3984 Salvia bowleyana HOM05D004721 ORTHO05D005765 6.0e-10 67.8 92 44.6
TWI75G0248 Tripterygium wilfordii HOM05D004721 ORTHO05D005765 6.0e-10 67.8 92 44.6
Dinv23488 Davidia involucrata HOM05D004721 ORTHO05D005765 7.8e-10 67.4 92 44.6
Atru.chr5.3082 Acer truncatum HOM05D004721 ORTHO05D005765 1.3e-09 66.6 90 46.7
Cpa.g.sc106.2 Carica papaya HOM05D004721 ORTHO05D005765 1.3e-09 66.6 91 44.0
Lj9A377G93 Lonicera japonica HOM05D004721 ORTHO05D005765 1.3e-09 66.6 92 43.5
TWI31G1285 Tripterygium wilfordii HOM05D004721 ORTHO05D005765 1.7e-09 66.2 92 44.6
Cfa005049 Carpinus fangiana HOM05D004721 ORTHO05D005765 2.3e-09 65.9 92 45.7
Haze_02333 Corylus avellana HOM05D004721 ORTHO05D005765 3.0e-09 65.5 100 44.0
Nn5g29707 Nelumbo nucifera HOM05D004721 ORTHO05D005765 3.0e-09 65.5 92 44.6
Lj1g0012947 Lotus japonicus HOM05D004721 ORTHO05D005765 3.9e-09 65.1 90 46.7
Medtr3g117220 Medicago truncatula HOM05D004721 ORTHO05D005765 3.9e-09 65.1 92 45.7
QL11p045210 Quercus lobata HOM05D004721 ORTHO05D005765 5.0e-09 64.7 91 44.0
Cfa005051 Carpinus fangiana HOM05D004721 ORTHO05D005765 6.6e-09 64.3 96 44.8
CiPaw.06G132800 Carya illinoinensis HOM05D004721 ORTHO05D005765 6.6e-09 64.3 92 43.5
FvH4_2g09630 Fragaria vesca HOM05D004721 ORTHO05D005765 6.6e-09 64.3 92 43.5
Potri.009G120600 Populus trichocarpa HOM05D004721 ORTHO05D005765 6.6e-09 64.3 92 43.5
GSVIVG01023826001 Vitis vinifera HOM05D004721 ORTHO05D005765 6.6e-09 64.3 92 44.6
FAN24G2181 Fragaria x ananassa HOM05D004721 ORTHO05D005765 8.6e-09 63.9 92 43.5
Peaxi162Scf00016g00435 Petunia axillaris HOM05D004721 ORTHO05D005765 8.6e-09 63.9 92 42.4
Thecc.02G080400 Theobroma cacao HOM05D004721 ORTHO05D005765 8.6e-09 63.9 90 46.7
TAR628G0683 Trochodendron aralioides HOM05D004721 ORTHO05D005765 8.6e-09 63.9 92 43.5
AUR62016772 Chenopodium quinoa HOM05D004721 ORTHO05D005765 1.1e-08 63.5 75 49.3
Ciclev10028779m.g Citrus clementina HOM05D004721 ORTHO05D005765 1.1e-08 63.5 90 44.4
TAR628G0727 Trochodendron aralioides HOM05D004721 ORTHO05D005765 1.1e-08 63.5 92 43.5
Prupe.8G090900 Prunus persica HOM05D004721 ORTHO05D005765 1.5e-08 63.2 92 42.4
HanXRQChr03g0069331 Helianthus annuus HOM05D004721 ORTHO05D005765 1.9e-08 62.8 94 42.6
Lsat_1_v5_gn_9_107961 Lactuca sativa HOM05D004721 ORTHO05D005765 1.9e-08 62.8 92 44.6
MD10G1068900 Malus domestica HOM05D004721 ORTHO05D005765 1.9e-08 62.8 92 41.3
Hund00240 Selenicereus undatus HOM05D004721 ORTHO05D005765 1.9e-08 62.8 91 40.7
Aqoxy6G01195 Aquilegia oxysepala HOM05D004721 ORTHO05D005765 2.5e-08 62.4 92 43.5
Duzib052G1174 Durio zibethinus HOM05D004721 ORTHO05D005765 2.5e-08 62.4 92 43.5
FAN15G0894 Fragaria x ananassa HOM05D004721 ORTHO05D005765 2.5e-08 62.4 92 42.4
PSO339G6113 Papaver somniferum HOM05D004721 ORTHO05D005765 2.5e-08 62.4 92 43.5
RcHm_v2.0_Chr6g0265981 Rosa chinensis HOM05D004721 ORTHO05D005765 2.5e-08 62.4 92 42.4
ClCG11G004130 Citrullus lanatus HOM05D004721 ORTHO05D005765 3.3e-08 62.0 92 42.4
Psat5g005400 Pisum sativum HOM05D004721 ORTHO05D005765 3.3e-08 62.0 90 45.6
TPR.G32188 Trifolium pratense HOM05D004721 ORTHO05D005765 3.3e-08 62.0 90 45.6
arahy.Tifrunner.gnm1.ann1.0UP1AG Arachis hypogaea HOM05D004721 ORTHO05D005765 4.3e-08 61.6 90 45.6
arahy.Tifrunner.gnm1.ann1.IE0TZZ Arachis hypogaea HOM05D004721 ORTHO05D005765 4.3e-08 61.6 90 45.6
MELO3C023324.2 Cucumis melo HOM05D004721 ORTHO05D005765 4.3e-08 61.6 96 42.7
CsaV3_2G015040 Cucumis sativus L. HOM05D004721 ORTHO05D005765 4.3e-08 61.6 96 42.7
MD05G1061200 Malus domestica HOM05D004721 ORTHO05D005765 4.3e-08 61.6 92 41.3
Sabra09G0092900 Salix brachista HOM05D004721 ORTHO05D005765 4.3e-08 61.6 92 42.4
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 4.3e-08 61.6 92 40.2
EL10Ac9g21691 Beta vulgaris HOM05D004721 ORTHO05D005765 7.3e-08 60.8 91 41.8
Cc02_g17240 Coffea canephora HOM05D004721 ORTHO05D005765 7.3e-08 60.8 96 40.6
MBI10_g00756_MAGBIO Magnolia biondii HOM05D004721 ORTHO05D005765 7.3e-08 60.8 90 44.4
Sed0009940 Sechium edule HOM05D004721 ORTHO05D005765 9.5e-08 60.5 92 41.3
arahy.Tifrunner.gnm1.ann1.P63ZP0 Arachis hypogaea HOM05D004721 ORTHO05D005765 1.2e-07 60.1 90 44.4
arahy.Tifrunner.gnm1.ann1.VA1NMQ Arachis hypogaea HOM05D004721 ORTHO05D005765 1.2e-07 60.1 90 44.4
Lalb_Chr08g0246691 Lupinus albus HOM05D004721 ORTHO05D005765 1.2e-07 60.1 92 43.5
ATR1158G041 Amborella trichopoda HOM05D004721 ORTHO05D005765 1.6e-07 59.7 91 39.6
Nitab4.5_0003234g0080 Nicotiana tabacum HOM05D004721 ORTHO05D005765 1.6e-07 59.7 76 47.4
Rhsim11G0180400 Rhododendron simsii HOM05D004721 ORTHO05D005765 1.6e-07 59.7 92 41.3
vmacro02078 Vaccinium macrocarpon HOM05D004721 ORTHO05D005765 1.6e-07 59.7 92 40.2
AUR62011286 Chenopodium quinoa HOM05D004721 ORTHO05D005765 2.1e-07 59.3 89 40.4
Nitab4.5_0005796g0050 Nicotiana tabacum HOM05D004721 ORTHO05D005765 3.6e-07 58.5 90 42.2
Glyma.04G009800 Glycine max HOM05D004721 ORTHO05D005765 4.7e-07 58.2 90 43.3
THA.LOC104807751 Tarenaya hassleriana HOM05D004721 ORTHO05D005765 4.7e-07 58.2 90 43.3
Ah.01g019120 Amaranthus hybridus HOM05D004721 ORTHO05D005765 6.2e-07 57.8 91 38.5
VMungo1309G2240 Vigna mungo HOM05D004721 ORTHO05D005765 6.2e-07 57.8 90 43.3
CAN.G1544.7 Capsicum annuum HOM05D004721 ORTHO05D005765 8.0e-07 57.4 96 39.6
ECA240G1659 Erigeron canadensis HOM05D004721 ORTHO05D005765 1.1e-06 57.0 92 42.4
Phvul.009G005100 Phaseolus vulgaris HOM05D004721 ORTHO05D005765 1.1e-06 57.0 90 42.2
Sp7g36700 Schrenkiella parvula HOM05D004721 ORTHO05D005765 1.1e-06 57.0 96 40.6
PGSC0003DMG400030950 Solanum tuberosum HOM05D004721 ORTHO05D005765 1.1e-06 57.0 94 38.3
Eucgr.G01697 Eucalyptus grandis HOM05D004721 ORTHO05D005765 1.4e-06 56.6 90 38.9
Glyma.06G009800 Glycine max HOM05D004721 ORTHO05D005765 1.4e-06 56.6 92 41.3
Solyc01g109930.4 Solanum lycopersicum HOM05D004721 ORTHO05D005765 1.4e-06 56.6 94 38.3
Sopen01g052120 Solanum pennellii HOM05D004721 ORTHO05D005765 1.4e-06 56.6 94 38.3
Aa31LG6G16140 Aethionema arabicum HOM05D004721 ORTHO05D005765 2.3e-06 55.8 96 40.6
DCAR_023012 Daucus carota HOM05D004721 ORTHO05D005765 2.3e-06 55.8 90 40.0
A01p00240 Brassica napus HOM05D004721 ORTHO05D005765 3.1e-06 55.5 90 42.2
BraA01t00031Z Brassica rapa HOM05D004721 ORTHO05D005765 3.1e-06 55.5 90 42.2
CDE07G1572 Ceratophyllum demersum HOM05D004721 ORTHO05D005765 3.1e-06 55.5 90 40.0
Sc08g0000660 Simmondsia chinensis HOM05D004721 ORTHO05D005765 3.1e-06 55.5 91 38.5
BcaB03g12244 Brassica carinata HOM05D004721 ORTHO05D005765 4.0e-06 55.1 96 40.6
Thhalv10025644m.g Eutrema salsugineum HOM05D004721 ORTHO05D005765 4.0e-06 55.1 96 39.6
Os07g0191000 Oryza sativa ssp. japonica HOM05D004721 ORTHO05D005765 4.0e-06 55.1 96 38.5
Carub.0007s0100 Capsella rubella HOM05D004721 ORTHO05D005765 5.2e-06 54.7 96 39.6
AL7G11060 Arabidopsis lyrata HOM05D004721 ORTHO05D005765 6.8e-06 54.3 90 40.0
CANSAT11G2513 Cannabis sativa HOM05D004721 ORTHO05D005765 6.8e-06 54.3 92 39.1
A08p23810 Brassica napus HOM05D004721 ORTHO05D005765 8.9e-06 53.9 96 40.6
CARHR247630 Cardamine hirsuta HOM05D004721 ORTHO05D005765 8.9e-06 53.9 96 40.6


User provided reference genes

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