Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20458 Striga asiatica HOM05D003311 ORTHO05D003707 4.4e-280 967.6 605 100.0
SGA_v2.0_scaffold32G13229 Striga asiatica HOM05D003311 ORTHO05D003707 1.2e-24 119.0 79 74.7
MSTRG.16857 Avicennia marina HOM05D003311 ORTHO05D003707 2.1e-19 101.7 75 68.0
MSTRG.20036 Avicennia marina HOM05D003311 ORTHO05D003707 5.1e-18 97.1 86 60.5
Oeu008608.1 Olea europaea HOM05D003311 ORTHO05D003707 1.1e-17 95.9 71 66.2
MSTRG.5426 Avicennia marina HOM05D003311 ORTHO05D003707 1.5e-17 95.5 86 60.5
SalBow6G3538 Salvia bowleyana HOM05D003311 ORTHO05D003707 1.9e-17 95.1 75 66.7
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 3.3e-17 94.4 75 68.0
Oeu010052.1 Olea europaea HOM05D003311 ORTHO05D003707 3.3e-17 94.4 162 39.5
Thecc.02G066700 Theobroma cacao HOM05D003311 ORTHO05D003707 3.3e-17 94.4 75 68.0
Oeu008607.1 Olea europaea HOM05D003311 ORTHO05D003707 2.1e-16 91.7 71 63.4
Oeu010053.1 Olea europaea HOM05D003311 ORTHO05D003707 2.8e-16 91.3 86 55.8
Duzib052G0176 Durio zibethinus HOM05D003311 ORTHO05D003707 4.8e-16 90.5 75 65.3
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 1.8e-15 88.6 71 59.2
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 1.8e-15 88.6 69 65.2
Ciclev10028101m.g Citrus clementina HOM05D003311 ORTHO05D003707 3.1e-15 87.8 66 68.2
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 3.1e-15 87.8 75 62.7
Nitab4.5_0013889g0010 Nicotiana tabacum HOM05D003311 ORTHO05D003707 4.0e-15 87.4 74 60.8
Duzib099G0001 Durio zibethinus HOM05D003311 ORTHO05D003707 6.9e-15 86.7 75 64.0
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 6.9e-15 86.7 86 53.5
Nitab4.5_0000956g0190 Nicotiana tabacum HOM05D003311 ORTHO05D003707 9.0e-15 86.3 74 59.5
Lj3g0005308 Lotus japonicus HOM05D003311 ORTHO05D003707 1.2e-14 85.9 75 64.0
Ca_19004_v3 Cicer arietinum L. HOM05D003311 ORTHO05D003707 1.5e-14 85.5 69 58.0
SalBow6G2103 Salvia bowleyana HOM05D003311 ORTHO05D003707 1.5e-14 85.5 159 37.7
Rhsim11G0187900 Rhododendron simsii HOM05D003311 ORTHO05D003707 2.0e-14 85.1 69 59.4
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 2.6e-14 84.7 69 62.3
SGA_v2.0_scaffold207G41882 Striga asiatica HOM05D003311 ORTHO05D003707 2.6e-14 84.7 72 59.7
unitig_0.g832 Utricularia gibba HOM05D003311 ORTHO05D003707 2.6e-14 84.7 77 53.2
vmacro02251 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 2.6e-14 84.7 71 57.7
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 3.4e-14 84.3 75 57.3
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 3.4e-14 84.3 86 51.2
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 4.5e-14 84.0 69 56.5
Gorai.012G153300 Gossypium raimondii HOM05D003311 ORTHO05D003707 4.5e-14 84.0 71 62.0
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 4.5e-14 84.0 75 57.3
Peaxi162Scf00538g00520 Petunia axillaris HOM05D003311 ORTHO05D003707 4.5e-14 84.0 75 60.0
Sc08g0003160 Simmondsia chinensis HOM05D003311 ORTHO05D003707 4.5e-14 84.0 71 57.7
Cfa005186 Carpinus fangiana HOM05D003311 ORTHO05D003707 5.8e-14 83.6 71 56.3
Lj5A184G34 Lonicera japonica HOM05D003311 ORTHO05D003707 5.8e-14 83.6 92 50.0
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 5.8e-14 83.6 59 66.1
arahy.Tifrunner.gnm1.ann1.6SU9IG Arachis hypogaea HOM05D003311 ORTHO05D003707 7.6e-14 83.2 75 54.7
arahy.Tifrunner.gnm1.ann1.M74JA5 Arachis hypogaea HOM05D003311 ORTHO05D003707 7.6e-14 83.2 75 54.7
Gohir.D01G156000 Gossypium hirsutum HOM05D003311 ORTHO05D003707 7.6e-14 83.2 70 64.3
Gorai.002G193500 Gossypium raimondii HOM05D003311 ORTHO05D003707 7.6e-14 83.2 70 64.3
CAN.G588.28 Capsicum annuum HOM05D003311 ORTHO05D003707 1.3e-13 82.4 73 57.5
Gohir.D04G164900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.3e-13 82.4 71 60.6
Lj9A389T67 Lonicera japonica HOM05D003311 ORTHO05D003707 1.7e-13 82.0 75 57.3
Actinidia00597 Actinidia chinensis HOM05D003311 ORTHO05D003707 2.2e-13 81.6 80 51.2
Dinv04967 Davidia involucrata HOM05D003311 ORTHO05D003707 2.2e-13 81.6 70 58.6
ECA246G0279 Erigeron canadensis HOM05D003311 ORTHO05D003707 2.2e-13 81.6 70 57.1
Gohir.A04G122900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 2.2e-13 81.6 71 60.6
Peaxi162Scf00362g00962 Petunia axillaris HOM05D003311 ORTHO05D003707 2.2e-13 81.6 78 56.4
AUR62010091 Chenopodium quinoa HOM05D003311 ORTHO05D003707 2.9e-13 81.3 69 59.4
AUR62013087 Chenopodium quinoa HOM05D003311 ORTHO05D003707 2.9e-13 81.3 71 60.6
GSVIVG01024081001 Vitis vinifera HOM05D003311 ORTHO05D003707 2.9e-13 81.3 69 60.9
Atru.chr5.3229 Acer truncatum HOM05D003311 ORTHO05D003707 4.9e-13 80.5 77 58.4
Gohir.A01G164100 Gossypium hirsutum HOM05D003311 ORTHO05D003707 4.9e-13 80.5 70 62.9
HanXRQChr07g0186871 Helianthus annuus HOM05D003311 ORTHO05D003707 4.9e-13 80.5 73 58.9
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 6.4e-13 80.1 76 50.0
CsaV3_7G000820 Cucumis sativus L. HOM05D000144 ORTHO05D003707 1.1e-12 79.3 80 50.0
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 1.1e-12 79.3 86 48.8
PGSC0003DMG400001631 Solanum tuberosum HOM05D003311 ORTHO05D003707 1.1e-12 79.3 73 57.5
Haze_02195 Corylus avellana HOM05D003311 ORTHO05D003707 1.9e-12 78.6 66 56.1
PGSC0003DMG400004441 Solanum tuberosum HOM05D003311 ORTHO05D003707 1.9e-12 78.6 69 58.0
Hund06406 Selenicereus undatus HOM05D003396 ORTHO05D003646 2.4e-12 78.2 71 53.5
vmacro17380 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 3.2e-12 77.8 71 53.5
MELO3C013376.2 Cucumis melo HOM05D003311 ORTHO05D003707 4.2e-12 77.4 80 48.8
HanXRQChr10g0294871 Helianthus annuus HOM05D003311 ORTHO05D003707 4.2e-12 77.4 75 56.0
Atru.chr5.3230 Acer truncatum HOM05D003311 ORTHO05D003707 5.4e-12 77.0 74 52.7
CiPaw.05G077500 Carya illinoinensis HOM05D003311 ORTHO05D003707 5.4e-12 77.0 76 50.0
CANSAT25G1598 Cannabis sativa HOM05D003311 ORTHO05D003707 7.1e-12 76.6 75 54.7
CAN.G104.8 Capsicum annuum HOM05D003311 ORTHO05D003707 7.1e-12 76.6 70 58.6
ECA234G1895 Erigeron canadensis HOM05D003311 ORTHO05D003707 7.1e-12 76.6 71 57.7
HanXRQChr10g0290731 Helianthus annuus HOM05D003311 ORTHO05D003707 7.1e-12 76.6 77 53.2
Lsat_1_v5_gn_3_45680 Lactuca sativa HOM05D003311 ORTHO05D003707 7.1e-12 76.6 71 54.9
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 7.1e-12 76.6 75 57.3
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 7.1e-12 76.6 69 56.5
Rhsim05G0063000 Rhododendron simsii HOM05D003311 ORTHO05D003707 7.1e-12 76.6 68 52.9
Sed0022693 Sechium edule HOM05D003311 ORTHO05D003707 9.3e-12 76.3 75 49.3
CiPaw.06G125100 Carya illinoinensis HOM05D003311 ORTHO05D003707 1.2e-11 75.9 76 51.3
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 1.6e-11 75.5 57 66.7
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 1.6e-11 75.5 69 56.5
Psat7g138320 Pisum sativum HOM05D003311 ORTHO05D003707 1.6e-11 75.5 75 54.7
Ciclev10029326m.g Citrus clementina HOM05D003311 ORTHO05D003707 2.1e-11 75.1 78 50.0
Phvul.011G026700 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 2.1e-11 75.1 75 52.0
TAR628G0207 Trochodendron aralioides HOM05D003311 ORTHO05D003707 2.1e-11 75.1 69 55.1
ClCG02G004300 Citrullus lanatus HOM05D003311 ORTHO05D003707 2.7e-11 74.7 70 48.6
Cc02_g16500 Coffea canephora HOM05D003311 ORTHO05D003707 2.7e-11 74.7 59 67.8
Sopen01g053220 Solanum pennellii HOM05D003311 ORTHO05D003707 3.5e-11 74.3 73 53.4
PGSC0003DMG400001243 Solanum tuberosum HOM05D003311 ORTHO05D003707 4.6e-11 73.9 67 53.7
Sopen10g024830 Solanum pennellii HOM05D003311 ORTHO05D003707 6.0e-11 73.6 75 53.3
CSS0038966 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 7.9e-11 73.2 69 58.0
Solyc10g054900.2 Solanum lycopersicum HOM05D003311 ORTHO05D003707 7.9e-11 73.2 75 54.7
unitig_744.g24265 Utricularia gibba HOM05D003311 ORTHO05D003707 1.0e-10 72.8 78 46.2
MD05G1116400 Malus domestica HOM05D003311 ORTHO05D003707 1.3e-10 72.4 61 59.0
Oeu046127.1 Olea europaea HOM05D003311 ORTHO05D003707 1.3e-10 72.4 74 50.0
Sopen10g024820 Solanum pennellii HOM05D003311 ORTHO05D003707 1.8e-10 72.0 75 53.3
Aqoxy5G01799 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 2.3e-10 71.6 71 52.1
CsaV3_2G015730 Cucumis sativus L. HOM05D003311 ORTHO05D003707 2.3e-10 71.6 74 51.4
RcHm_v2.0_Chr6g0245161 Rosa chinensis HOM05D003311 ORTHO05D003707 3.0e-10 71.2 78 46.2
Eucgr.L01869 Eucalyptus grandis HOM05D003311 ORTHO05D003707 3.9e-10 70.9 76 47.4
MBI09_g00986_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.9e-10 70.9 96 47.9
SalBow3G2231 Salvia bowleyana HOM05D003311 ORTHO05D003707 5.1e-10 70.5 76 51.3
Sopen10g024840 Solanum pennellii HOM05D003311 ORTHO05D003707 5.1e-10 70.5 68 54.4
ClCG02G011360 Citrullus lanatus HOM05D003311 ORTHO05D003707 6.7e-10 70.1 74 52.7
ClCG02G011540 Citrullus lanatus HOM05D003311 ORTHO05D003707 6.7e-10 70.1 74 52.7
Glyma.04G005400 Glycine max HOM05D003311 ORTHO05D003707 6.7e-10 70.1 75 48.0
unitig_37.g12824 Utricularia gibba HOM05D003311 ORTHO05D003707 6.7e-10 70.1 84 50.0
Cpa.g.sc37.189 Carica papaya HOM05D003311 ORTHO05D003707 8.7e-10 69.7 68 52.9
GSVIVG01024076001 Vitis vinifera HOM05D003311 ORTHO05D003707 8.7e-10 69.7 71 52.1
MBI05_g46239_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 1.1e-09 69.3 69 55.1
Manes.11G090200 Manihot esculenta HOM05D003311 ORTHO05D003707 1.1e-09 69.3 83 47.0
MELO3C020785.2 Cucumis melo HOM05D003311 ORTHO05D003707 1.5e-09 68.9 74 50.0
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 1.5e-09 68.9 65 56.9
Oeu046128.1 Olea europaea HOM05D000700 ORTHO05D000397 3.3e-09 67.8 78 51.3
HanXRQChr10g0289061 Helianthus annuus HOM05D003311 ORTHO05D003707 4.3e-09 67.4 71 52.1
Phvul.009G024900 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 4.3e-09 67.4 74 47.3
VMungo1309G0179 Vigna mungo HOM05D003311 ORTHO05D003707 4.3e-09 67.4 74 50.0
FAN15G0502 Fragaria x ananassa HOM05D003311 ORTHO05D003707 5.6e-09 67.0 78 42.3
Eucgr.I01377 Eucalyptus grandis HOM05D003311 ORTHO05D003707 7.4e-09 66.6 69 47.8
FAN20G1603 Fragaria x ananassa HOM05D003311 ORTHO05D003707 7.4e-09 66.6 78 42.3
FAN27G1129 Fragaria x ananassa HOM05D003311 ORTHO05D003707 7.4e-09 66.6 78 42.3
Sed0012527 Sechium edule HOM05D003311 ORTHO05D003707 9.6e-09 66.2 65 52.3
FvH4_2g01970 Fragaria vesca HOM05D003311 ORTHO05D003707 1.3e-08 65.9 78 41.0
Hund00043 Selenicereus undatus HOM05D003311 ORTHO05D003707 1.3e-08 65.9 77 46.8
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 1.6e-08 65.5 194 30.9
CDE08G0629 Ceratophyllum demersum HOM05D003311 ORTHO05D003707 2.1e-08 65.1 75 46.7
TWI79G0740 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 2.1e-08 65.1 71 53.5
PSO170G2430 Papaver somniferum HOM05D003311 ORTHO05D003707 2.8e-08 64.7 273 27.1
FAN24G0785 Fragaria x ananassa HOM05D003311 ORTHO05D003707 3.7e-08 64.3 78 39.7
QL04p026366 Quercus lobata HOM05D003311 ORTHO05D003707 3.7e-08 64.3 52 55.8
PSO700G0002 Papaver somniferum HOM05D003311 ORTHO05D003707 4.8e-08 63.9 273 26.7
Ah.01g009150 Amaranthus hybridus HOM05D003396 ORTHO05D003646 6.2e-08 63.5 53 52.8
TAR376G0773 Trochodendron aralioides HOM05D003311 ORTHO05D003707 6.2e-08 63.5 72 45.8
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 8.1e-08 63.2 81 44.4
unitig_60.g25871 Utricularia gibba HOM05D003311 ORTHO05D003707 1.4e-07 62.4 88 43.2
TWI75G0647 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 1.8e-07 62.0 71 50.7
unitig_21.g20802 Utricularia gibba HOM05D003311 ORTHO05D003707 1.8e-07 62.0 47 59.6
ATR0810G037 Amborella trichopoda HOM05D003311 ORTHO05D003707 3.1e-07 61.2 76 44.7
PGR042G2254 Punica granatum HOM05D003311 ORTHO05D003707 4.0e-07 60.8 75 46.7
QL04p095545 Quercus lobata HOM05D003311 ORTHO05D003707 6.9e-07 60.1 52 51.9
Nn1g05901 Nelumbo nucifera HOM05D003311 ORTHO05D003707 1.2e-06 59.3 74 44.6
Ciclev10029494m.g Citrus clementina HOM05D003311 ORTHO05D003707 1.5e-06 58.9 90 41.1


User provided reference genes

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