Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20452 Striga asiatica HOM05D007714 ORTHO05D009659 2.0e-60 235.7 133 100.0
Oeu055640.1 Olea europaea HOM05D007714 ORTHO05D009659 4.5e-36 154.8 131 58.8
Migut.B00165 Erythranthe guttata HOM05D007714 ORTHO05D009659 4.2e-34 148.3 137 58.4
SalBow6G4832 Salvia bowleyana HOM05D007714 ORTHO05D009659 2.1e-33 146.0 127 58.3
MSTRG.16861 Avicennia marina HOM05D007714 ORTHO05D009659 5.2e-32 141.4 133 59.4
QL11p047512 Quercus lobata HOM05D007714 ORTHO05D009659 2.8e-30 135.6 133 51.9
Potri.004G167700 Populus trichocarpa HOM05D007714 ORTHO05D009659 4.5e-28 128.3 134 47.8
Glyma.04G005500 Glycine max HOM05D007714 ORTHO05D009659 7.7e-28 127.5 135 45.9
Sabra04G0112500 Salix brachista HOM05D007714 ORTHO05D009659 1.0e-27 127.1 131 48.9
DCAR_003697 Daucus carota HOM05D007714 ORTHO05D009659 3.8e-27 125.2 133 50.4
TWI31G1253 Tripterygium wilfordii HOM05D007714 ORTHO05D009659 3.8e-27 125.2 124 51.6
CsaV3_7G000790 Cucumis sativus L. HOM05D007714 ORTHO05D009659 3.2e-26 122.1 132 50.0
VMungo1309G2628 Vigna mungo HOM05D007714 ORTHO05D009659 4.2e-26 121.7 135 45.2
ClCG02G004310 Citrullus lanatus HOM05D007714 ORTHO05D009659 9.4e-26 120.6 125 51.2
Cpa.g.sc17.154 Carica papaya HOM05D007714 ORTHO05D009659 1.6e-25 119.8 133 46.6
Haze_02201 Corylus avellana HOM05D007714 ORTHO05D009659 1.6e-25 119.8 97 59.8
FAN20G3219 Fragaria x ananassa HOM05D007714 ORTHO05D009659 6.1e-25 117.9 132 44.7
MD05G1115400 Malus domestica HOM05D007714 ORTHO05D009659 6.1e-25 117.9 132 45.5
Nn5g30143 Nelumbo nucifera HOM05D007714 ORTHO05D009659 1.4e-24 116.7 133 46.6
Manes.11G089800 Manihot esculenta HOM05D007714 ORTHO05D009659 1.8e-24 116.3 131 48.1
Phvul.009G000200 Phaseolus vulgaris HOM05D007714 ORTHO05D009659 1.8e-24 116.3 135 43.7
Lsat_1_v5_gn_8_125840 Lactuca sativa HOM05D007714 ORTHO05D009659 3.0e-24 115.5 130 46.9
Lj3g0018720 Lotus japonicus HOM05D007714 ORTHO05D009659 3.0e-24 115.5 132 45.5
Psat7g178400 Pisum sativum HOM05D007714 ORTHO05D009659 4.0e-24 115.2 132 48.5
CiPaw.05G076900 Carya illinoinensis HOM05D007714 ORTHO05D009659 5.2e-24 114.8 132 44.7
FvH4_2g02061 Fragaria vesca HOM05D007714 ORTHO05D009659 5.2e-24 114.8 129 44.2
Thecc.02G067300 Theobroma cacao HOM05D007714 ORTHO05D009659 5.2e-24 114.8 133 45.9
RcHm_v2.0_Chr6g0245291 Rosa chinensis HOM05D007714 ORTHO05D009659 8.8e-24 114.0 132 42.4
Glyma.12G024200 Glycine max HOM05D007714 ORTHO05D009659 1.5e-23 113.2 135 44.4
Eucgr.G01755 Eucalyptus grandis HOM05D007714 ORTHO05D009659 2.0e-23 112.8 133 46.6
FAN27G1210 Fragaria x ananassa HOM05D007714 ORTHO05D009659 2.0e-23 112.8 132 43.9
Manes.04G078500 Manihot esculenta HOM05D007714 ORTHO05D009659 2.0e-23 112.8 131 47.3
CANSAT25G2935 Cannabis sativa HOM05D007714 ORTHO05D009659 4.4e-23 111.7 135 43.0
Duzib052G0442 Durio zibethinus HOM05D007714 ORTHO05D009659 4.4e-23 111.7 135 45.2
VMungo1127G1113 Vigna mungo HOM05D007714 ORTHO05D009659 7.5e-23 110.9 134 42.5
Eucgr.I01373 Eucalyptus grandis HOM05D007714 ORTHO05D009659 9.8e-23 110.5 133 47.4
Gohir.D12G032900 Gossypium hirsutum HOM05D007714 ORTHO05D009659 2.2e-22 109.4 133 43.6
Gorai.008G033700 Gossypium raimondii HOM05D007714 ORTHO05D009659 2.2e-22 109.4 133 43.6
Duzib132G1133 Durio zibethinus HOM05D007714 ORTHO05D009659 4.8e-22 108.2 130 43.1
Rhsim11G0187600 Rhododendron simsii HOM05D007714 ORTHO05D009659 4.8e-22 108.2 126 46.0
Atru.BG.72.p Acer truncatum HOM05D007714 ORTHO05D009659 6.3e-22 107.8 123 44.7
FAN20G0376 Fragaria x ananassa HOM05D007714 ORTHO05D009659 6.3e-22 107.8 94 51.1
Hma1.2p1_1385F.1_g279720 Hydrangea macrophylla HOM05D007714 ORTHO05D009659 6.3e-22 107.8 131 43.5
MBI09_g26111_MAGBIO Magnolia biondii HOM05D003064 ORTHO05D009659 6.3e-22 107.8 132 43.9
Sed0013832 Sechium edule HOM05D007714 ORTHO05D009659 1.1e-21 107.1 132 47.7
Gohir.A12G039500 Gossypium hirsutum HOM05D007714 ORTHO05D009659 1.4e-21 106.7 133 42.9
Medtr4g075500 Medicago truncatula HOM05D007714 ORTHO05D009659 1.4e-21 106.7 131 44.3
FAN24G2861 Fragaria x ananassa HOM05D003332 ORTHO05D009659 2.4e-21 105.9 94 50.0
arahy.Tifrunner.gnm1.ann1.IKIS5S Arachis hypogaea HOM05D007714 ORTHO05D009659 3.1e-21 105.5 125 44.8
Prupe.8G160200 Prunus persica HOM05D007714 ORTHO05D009659 3.1e-21 105.5 133 43.6
Duzib248G0871 Durio zibethinus HOM05D007714 ORTHO05D009659 9.1e-21 104.0 133 42.1
TPR.G17178 Trifolium pratense HOM05D007714 ORTHO05D009659 9.1e-21 104.0 125 44.8
PGR142G4187 Punica granatum HOM05D007714 ORTHO05D009659 1.2e-20 103.6 130 52.3
Ciclev10029583m.g Citrus clementina HOM05D007714 ORTHO05D009659 1.6e-20 103.2 124 44.4
COL.COLO4_17252 Corchorus olitorius HOM05D007714 ORTHO05D009659 1.6e-20 103.2 134 40.3
Aqoxy6G02058 Aquilegia oxysepala HOM05D007714 ORTHO05D009659 2.0e-20 102.8 132 43.9
HanXRQChr17g0553681 Helianthus annuus HOM05D007714 ORTHO05D009659 7.7e-20 100.9 126 44.4
THA.LOC104824780 Tarenaya hassleriana HOM05D007714 ORTHO05D009659 5.0e-19 98.2 132 42.4
AL4G10270 Arabidopsis lyrata HOM05D007714 ORTHO05D009659 6.6e-19 97.8 123 44.7
MD10G1117900 Malus domestica HOM05D007714 ORTHO05D009659 6.6e-19 97.8 132 39.4
AT2G21180 Arabidopsis thaliana HOM05D007714 ORTHO05D009659 1.5e-18 96.7 122 44.3
Prupe.8G160100 Prunus persica HOM05D007714 ORTHO05D009659 1.9e-18 96.3 132 40.2
Gohir.D01G155601 Gossypium hirsutum HOM05D007714 ORTHO05D009659 7.2e-18 94.4 133 37.6
Gorai.002G192800 Gossypium raimondii HOM05D007714 ORTHO05D009659 1.6e-17 93.2 134 37.3
BcaC07g41170 Brassica carinata HOM05D007714 ORTHO05D009659 2.8e-17 92.4 130 40.0
C08p41770 Brassica napus HOM05D007714 ORTHO05D009659 2.8e-17 92.4 130 40.0
Carub.0004s0020 Capsella rubella HOM05D007714 ORTHO05D009659 2.8e-17 92.4 125 44.8
BraA09t41234Z Brassica rapa HOM05D007714 ORTHO05D009659 3.6e-17 92.0 130 40.0
BolC8t51740H Brassica oleracea HOM05D007714 ORTHO05D009659 4.7e-17 91.7 130 39.2
A09p58470 Brassica napus HOM05D007714 ORTHO05D009659 6.1e-17 91.3 130 40.0
Potri.009G129200 Populus trichocarpa HOM05D007714 ORTHO05D009659 1.0e-16 90.5 133 39.8
BcaB08g34968 Brassica carinata HOM05D007714 ORTHO05D009659 1.8e-16 89.7 130 38.5
Os03g0249700 Oryza sativa ssp. japonica HOM05D007714 ORTHO05D009659 5.2e-16 88.2 131 35.1
Ciclev10029987m.g Citrus clementina HOM05D007714 ORTHO05D009659 1.2e-15 87.0 125 41.6
Thhalv10000371m.g Eutrema salsugineum HOM05D007714 ORTHO05D009659 1.2e-15 87.0 130 42.3
Sp4g00330 Schrenkiella parvula HOM05D007714 ORTHO05D009659 3.4e-15 85.5 133 49.6
HPP92_020971 Vanilla planifolia HOM05D007714 ORTHO05D009659 7.5e-15 84.3 123 39.8
Aa31LG7G15510 Aethionema arabicum HOM05D007714 ORTHO05D009659 1.7e-14 83.2 130 36.9
Solyc01g111110.3 Solanum lycopersicum HOM05D007714 ORTHO05D009659 4.9e-14 81.6 88 47.7
Sopen01g053170 Solanum pennellii HOM05D007714 ORTHO05D009659 6.3e-14 81.3 88 47.7
PGSC0003DMG400001634 Solanum tuberosum HOM05D007714 ORTHO05D009659 1.1e-13 80.5 88 46.6
Zm00001eb398560 Zea mays HOM05D007714 ORTHO05D009659 4.1e-13 78.6 131 32.8
Peaxi162Scf00362g01024 Petunia axillaris HOM05D007714 ORTHO05D009659 6.6e-11 71.2 88 44.3
Hma1.2p1_1385F.1_g279730 Hydrangea macrophylla HOM05D007714 ORTHO05D009659 8.6e-11 70.9 131 37.4
Glyma.06G005200 Glycine max HOM05D007714 ORTHO05D009659 3.3e-10 68.9 96 37.5
ATR1042G001 Amborella trichopoda HOM05D003064 ORTHO05D009659 2.1e-09 66.2 126 34.1
EL10Ac9g21449 Beta vulgaris HOM05D007714 ORTHO05D009659 3.6e-09 65.5 84 41.7
Ca_18998_v3 Cicer arietinum L. HOM05D007714 ORTHO05D009659 8.0e-09 64.3 47 66.0
Actinidia20484 Actinidia chinensis HOM05D007714 ORTHO05D009659 1.8e-08 63.2 92 33.7
Zm00001eb438760 Zea mays HOM05D007714 ORTHO05D009659 1.8e-08 63.2 65 40.0
Gohir.A01G163500 Gossypium hirsutum HOM05D007714 ORTHO05D009659 1.3e-06 57.0 101 33.7
TAR369G0713 Trochodendron aralioides HOM05D003064 ORTHO05D001733 1.3e-06 57.0 117 29.9
THA.LOC104824781 Tarenaya hassleriana HOM05D013550 ORTHO05D015366 1.7e-06 56.6 57 54.4
Prupe.8G160000 Prunus persica HOM05D044250 ORTHO05D050605 8.3e-06 54.3 60 48.3


User provided reference genes

Program Settings