Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 0.0e+00 1790.4 1114 100.0
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 2.7e-227 793.1 1133 61.4
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 2.7e-219 766.5 1134 59.1
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 2.4e-215 753.4 1124 59.2
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 1.2e-195 688.0 1177 55.1
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 6.4e-184 649.0 1137 55.3
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 4.4e-169 599.7 898 58.9
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 7.9e-158 562.4 1220 49.3
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 8.1e-155 552.4 1120 50.7
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 1.0e-152 545.4 1127 50.4
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 1.2e-150 538.5 1094 51.9
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 4.6e-150 536.6 1142 50.4
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 1.8e-149 534.6 1219 48.1
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 2.8e-147 527.3 1139 50.7
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 1.2e-145 521.9 1147 50.0
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 2.5e-143 514.2 1185 48.4
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 1.6e-142 511.5 1148 49.7
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 2.7e-142 510.8 1140 43.2
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 3.9e-141 506.9 1141 49.0
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 2.8e-139 500.7 1110 49.5
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 2.8e-139 500.7 1152 45.6
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 3.7e-139 500.4 1065 52.5
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.4e-135 488.4 1056 50.0
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 1.4e-135 488.4 1080 49.6
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 1.2e-134 485.3 1101 50.0
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 2.7e-134 484.2 1118 48.6
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 4.6e-134 483.4 730 65.6
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 6.7e-133 479.6 1140 48.0
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 1.4e-130 471.9 1108 49.4
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 2.4e-130 471.1 1154 48.0
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.5e-129 468.4 1101 49.3
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 1.4e-127 461.8 1102 48.7
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 4.2e-127 460.3 1129 48.2
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 5.5e-127 459.9 1106 48.0
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 3.6e-126 457.2 1166 47.5
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 1.0e-125 455.7 1101 47.4
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 8.8e-125 452.6 788 55.2
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 2.6e-121 441.0 1112 46.9
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 1.0e-120 439.1 860 53.4
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 8.0e-118 429.5 1077 48.6
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 7.4e-116 422.9 847 55.4
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 2.2e-115 421.4 879 54.0
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 6.3e-115 419.9 1141 40.7
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 2.6e-113 414.5 1144 46.4
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 2.6e-113 414.5 1137 45.8
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 1.0e-112 412.5 1154 45.7
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 6.5e-112 409.8 1159 45.1
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 7.2e-111 406.4 526 62.7
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 7.2e-111 406.4 1151 46.6
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 9.4e-111 406.0 953 46.8
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 1.2e-110 405.6 1152 46.0
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.1e-110 404.8 1145 46.0
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 6.1e-110 403.3 724 55.9
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 8.0e-110 402.9 1156 45.4
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 1.4e-109 402.1 1121 46.5
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 1.8e-109 401.7 1165 45.0
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.3e-109 401.4 1139 45.7
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 4.0e-109 400.6 730 60.3
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 7.5e-108 396.4 1200 44.7
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 6.3e-107 393.3 982 43.8
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 1.1e-106 392.5 1098 45.6
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 1.8e-106 391.7 828 54.5
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 1.8e-106 391.7 992 48.8
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 1.2e-105 389.0 1144 44.8
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 5.9e-105 386.7 1229 43.4
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 3.8e-104 384.0 1111 45.4
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.9e-103 381.7 741 57.8
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 2.5e-103 381.3 1180 44.2
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 5.5e-103 380.2 1182 44.2
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 9.4e-103 379.4 1101 45.3
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 2.7e-102 377.9 679 59.1
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 8.0e-102 376.3 729 56.5
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 4.0e-101 374.0 1101 46.9
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 5.2e-101 373.6 1136 44.4
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 9.8e-100 369.4 1182 45.0
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 1.3e-99 369.0 1158 45.2
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 1.7e-99 368.6 1162 44.8
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.2e-99 368.2 774 55.2
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.2e-97 362.5 1093 44.3
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 6.1e-94 350.1 803 54.3
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 6.1e-94 350.1 863 51.9
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 2.3e-93 348.2 1147 43.9
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 2.6e-92 344.7 1186 42.7
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 5.7e-92 343.6 812 49.6
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 2.2e-91 341.7 778 54.0
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 1.1e-90 339.3 1197 42.7
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 3.5e-89 334.3 815 52.4
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 7.8e-89 333.2 1200 41.9
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 7.8e-89 333.2 1092 44.3
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 5.0e-88 330.5 1218 41.8
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 2.5e-87 328.2 1089 44.4
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 3.6e-86 324.3 958 47.0
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 6.2e-86 323.6 1175 42.2
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 5.2e-85 320.5 741 45.9
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 3.0e-72 278.1 709 48.1
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 1.4e-61 242.7 244 52.0
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.4e-58 232.6 1047 42.4
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.2e-57 229.6 343 68.2
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 1.3e-56 226.1 288 82.3
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 8.1e-46 190.3 126 74.6
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 8.1e-46 190.3 124 75.8
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 1.7e-43 182.6 620 44.4
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 6.0e-41 174.1 735 41.8
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 1.0e-40 173.3 301 62.8
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 9.6e-39 166.8 668 42.5
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 3.1e-37 161.8 146 54.8
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 7.6e-36 157.1 311 68.2
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 3.0e-32 145.2 711 47.0
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.5e-31 142.9 138 55.8
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.1e-30 139.0 242 40.9
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 6.9e-29 134.0 111 53.2
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.5e-28 132.9 206 40.8
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 4.5e-28 131.3 244 37.3
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 1.3e-27 129.8 245 34.7
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.1e-26 126.7 244 39.3
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 2.1e-25 122.5 109 60.6
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.3e-24 119.8 123 52.8
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.5e-23 116.3 116 50.9
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 4.8e-22 111.3 241 32.0
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 1.0e-19 103.6 237 32.1
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 1.3e-19 103.2 94 48.9
CDE09G0717 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 2.2e-14 85.9 100 68.0
SMO106G0001 Selaginella moellendorffii HOM05D013590 ORTHO05D015741 5.0e-11 74.7 74 52.7
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 1.1e-10 73.6 213 31.0
SEGI_00210 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 5.7e-07 61.2 49 59.2
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 7.4e-07 60.8 113 26.5
SMO286G0011 Selaginella moellendorffii HOM05D013590 ORTHO05D015741 7.4e-07 60.8 61 49.2


User provided reference genes

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