Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 5.9e-175 617.5 319 100.0
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 9.4e-56 221.5 324 47.2
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.0e-54 218.0 321 47.4
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.7e-53 212.2 324 46.3
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 3.8e-49 199.5 263 51.0
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.5e-48 197.6 262 49.6
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 5.5e-48 195.7 269 48.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.2e-47 194.5 327 45.6
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.7e-47 193.4 269 48.0
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 1.4e-46 191.0 325 43.7
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.4e-46 191.0 261 47.5
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 1.8e-46 190.7 262 49.6
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.3e-46 190.3 267 48.3
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 2.3e-46 190.3 261 49.0
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.0e-46 189.9 296 45.9
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 3.0e-46 189.9 269 47.2
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 6.8e-46 188.7 279 46.6
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 6.8e-46 188.7 263 48.3
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 8.8e-46 188.3 322 43.8
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.5e-45 187.6 259 49.0
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.5e-45 187.6 323 44.6
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.0e-45 187.2 259 48.6
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 2.6e-45 186.8 260 50.0
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 5.7e-45 185.7 261 49.0
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 5.7e-45 185.7 267 48.3
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 9.8e-45 184.9 311 44.1
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.3e-44 184.5 259 48.6
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.7e-44 184.1 325 42.8
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.2e-44 183.7 261 49.4
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 2.8e-44 183.3 259 49.0
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 2.8e-44 183.3 305 45.6
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.8e-44 183.3 259 49.4
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.8e-44 183.3 267 44.9
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 3.7e-44 183.0 259 49.0
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 3.7e-44 183.0 298 44.6
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 4.9e-44 182.6 268 47.0
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 4.9e-44 182.6 269 47.2
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 6.3e-44 182.2 263 48.3
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 8.3e-44 181.8 264 47.0
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.3e-44 181.8 268 46.3
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 1.8e-43 180.6 262 47.3
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.4e-43 180.3 259 48.6
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.4e-43 180.3 268 45.9
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.4e-43 180.3 267 47.2
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 3.1e-43 179.9 263 45.2
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 3.1e-43 179.9 315 45.1
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.1e-43 179.9 259 48.3
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 3.1e-43 179.9 266 47.0
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 3.1e-43 179.9 298 44.3
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 3.1e-43 179.9 261 48.3
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 4.1e-43 179.5 259 48.3
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 4.1e-43 179.5 254 47.6
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.1e-43 179.5 261 49.0
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.1e-43 179.5 268 47.0
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 7.0e-43 178.7 258 48.4
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 7.0e-43 178.7 258 46.9
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 7.0e-43 178.7 260 46.2
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 9.2e-43 178.3 268 45.9
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 9.2e-43 178.3 260 48.1
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.2e-42 177.9 263 46.8
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.2e-42 177.9 262 45.8
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.6e-42 177.6 262 46.9
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.0e-42 177.2 264 48.1
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 4.5e-42 176.0 260 46.2
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 5.9e-42 175.6 257 45.9
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 7.7e-42 175.3 265 47.2
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 7.7e-42 175.3 263 47.1
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 7.7e-42 175.3 257 45.1
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.3e-41 174.5 262 46.6
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.7e-41 174.1 230 49.1
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.7e-41 174.1 261 47.1
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.7e-41 174.1 260 45.8
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 2.3e-41 173.7 262 46.6
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 2.3e-41 173.7 268 44.8
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 2.3e-41 173.7 254 47.6
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.8e-41 172.9 256 46.9
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 3.8e-41 172.9 187 55.6
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 5.0e-41 172.6 259 46.3
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 5.0e-41 172.6 259 46.3
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 5.0e-41 172.6 261 47.1
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 8.6e-41 171.8 292 43.2
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 9.5e-40 168.3 191 52.4
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.2e-39 167.9 227 48.9
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 1.2e-39 167.9 265 43.8
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.2e-39 167.9 239 47.3
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.1e-39 167.2 279 41.6
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.1e-39 167.2 262 45.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.1e-39 167.2 260 44.2
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.8e-39 166.8 193 52.3
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.8e-39 166.8 193 52.3
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.8e-39 166.8 212 50.0
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 3.6e-39 166.4 191 52.9
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 4.7e-39 166.0 248 46.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 6.1e-39 165.6 309 41.7
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 8.0e-39 165.2 236 48.7
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 1.4e-38 164.5 273 41.8
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.4e-38 164.5 257 42.0
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.3e-38 163.7 291 42.3
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 5.2e-38 162.5 268 44.8
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.2e-37 161.4 256 44.1
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 2.2e-36 157.1 270 43.7
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.9e-36 156.8 261 43.3
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.8e-35 154.1 238 47.5
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 9.2e-35 151.8 235 45.5
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.7e-34 150.2 292 38.0
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 3.3e-32 143.3 199 44.7
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 6.2e-31 139.0 252 38.5
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.5e-29 134.4 247 38.1
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.2e-26 124.8 237 39.7
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 5.0e-25 119.4 132 55.3
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 3.1e-22 110.2 187 38.5
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.5e-21 107.8 144 50.0
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.0e-17 95.1 65 75.4
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 2.3e-17 94.0 162 38.3
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 6.2e-15 85.9 123 47.2
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 3.1e-14 83.6 114 45.6
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.2e-13 81.6 243 30.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 2.2e-12 77.4 178 29.8
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 4.9e-12 76.3 258 32.2
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 5.6e-08 62.8 42 76.2
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 2.8e-07 60.5 67 58.2


User provided reference genes

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