Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20348 Striga asiatica HOM05D028864 ORTHO05D009044 8.8e-124 446.8 203 100.0
SGA_v2.0_scaffold32G13296 Striga asiatica HOM05D028864 ORTHO05D009044 3.0e-39 166.0 223 45.7
SGA_v2.0_scaffold32G13304 Striga asiatica HOM05D028864 ORTHO05D009044 6.5e-34 148.3 202 46.5
SGA_v2.0_scaffold32G13300 Striga asiatica HOM05D028864 ORTHO05D009044 1.3e-29 134.0 195 43.6
FvH4_4g02090 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-10 70.9 183 31.7
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-10 69.3 182 29.1
Haze_02114 Corylus avellana HOM05D007346 ORTHO05D009044 5.0e-10 68.9 182 29.7
Cfa005279 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.4e-09 67.4 179 28.5
Haze_02115 Corylus avellana HOM05D007346 ORTHO05D009044 4.2e-09 65.9 182 29.7
Aqoxy5G02613 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-08 64.3 157 29.3
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 1.6e-08 63.9 213 28.2
Aqoxy2G03783 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.9e-08 61.6 176 29.0
RcHm_v2.0_Chr6g0254631 Rosa chinensis HOM05D007346 ORTHO05D009044 1.0e-07 61.2 179 30.2
Aqoxy2G03786 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-07 60.8 133 31.6
FAN24G3266 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.4e-07 60.8 182 28.6
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-07 60.8 178 30.3
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-07 60.8 178 30.3
Cfa005278 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.8e-07 60.5 185 27.6
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 2.3e-07 60.1 184 30.4
FAN15G1755 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.3e-07 60.1 162 31.5
Aqoxy2G03785 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.9e-07 59.3 188 28.2
FAN15G1511 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.1e-07 58.9 162 26.5
Aqoxy5G02614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.7e-07 58.5 188 27.7
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 8.8e-07 58.2 205 25.9
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 8.8e-07 58.2 168 29.2
Ciclev10030189m.g Citrus clementina HOM05D007346 ORTHO05D009044 2.6e-06 56.6 216 24.5
FAN12G0105 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.6e-06 56.6 184 29.9
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 3.3e-06 56.2 179 27.9
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 3.3e-06 56.2 100 35.0
MSTRG.6367 Avicennia marina HOM05D000151 ORTHO05D000074 5.7e-06 55.5 178 25.8
FvH4_2g16550 Fragaria vesca HOM05D007346 ORTHO05D009044 5.7e-06 55.5 163 27.6
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 7.4e-06 55.1 200 23.0


User provided reference genes

Program Settings