Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 8.9e-53 209.9 100 100.0
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 2.8e-22 108.6 93 64.5
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 7.9e-17 90.5 81 58.0
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 2.3e-16 89.0 76 60.5
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 8.7e-16 87.0 92 53.3
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 5.6e-15 84.3 85 51.8
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 9.6e-15 83.6 102 47.1
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 4.5e-12 74.7 93 47.3
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 7.6e-12 73.9 111 41.4
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 1.0e-11 73.6 103 44.7
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 1.0e-11 73.6 85 47.1
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 2.2e-11 72.4 107 43.9
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 2.2e-11 72.4 104 43.3
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 2.9e-11 72.0 109 45.0
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 3.8e-11 71.6 95 42.1
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.9e-11 71.2 105 41.0
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.9e-11 71.2 96 50.0
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 8.4e-11 70.5 102 38.2
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 5.5e-10 67.8 93 46.2
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 5.5e-10 67.8 105 42.9
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 5.5e-10 67.8 111 42.3
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 7.1e-10 67.4 91 41.8
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 1.2e-09 66.6 105 35.2
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 2.1e-09 65.9 102 39.2
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 3.5e-09 65.1 90 42.2
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 4.6e-09 64.7 87 43.7
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 7.9e-09 63.9 82 51.2
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 1.8e-08 62.8 85 43.5
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.8e-08 62.8 89 41.6
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 2.5e-07 58.9 99 40.4
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 2.5e-07 58.9 102 38.2
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 3.3e-07 58.5 69 43.5
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 4.3e-07 58.2 97 43.3
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 5.7e-07 57.8 102 41.2
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.6e-07 57.0 73 49.3
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 1.3e-06 56.6 81 44.4
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 1.3e-06 56.6 95 40.0
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 1.3e-06 56.6 92 40.2
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.3e-06 56.6 71 45.1
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.6e-06 56.2 108 37.0
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 1.6e-06 56.2 101 42.6
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 2.1e-06 55.8 107 39.3
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 2.8e-06 55.5 89 42.7
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 2.8e-06 55.5 72 44.4
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 2.8e-06 55.5 72 44.4
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 4.8e-06 54.7 92 38.0
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 4.8e-06 54.7 92 38.0
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 4.8e-06 54.7 71 43.7
Zm00001eb407090 Zea mays HOM05D022723 ORTHO05D026008 4.8e-06 54.7 80 46.2
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 6.2e-06 54.3 79 44.3


User provided reference genes

Program Settings