Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20342 Striga asiatica HOM05D008303 ORTHO05D010386 6.9e-63 243.8 125 100.0
Migut.B00055 Erythranthe guttata HOM05D008303 ORTHO05D010386 5.0e-29 131.3 128 60.2
Migut.N01334 Erythranthe guttata HOM05D008303 ORTHO05D010386 1.9e-15 86.3 122 47.5
MSTRG.5463 Avicennia marina HOM05D008303 ORTHO05D010386 3.3e-12 75.5 121 46.3
Oeu015521.1 Olea europaea HOM05D008303 ORTHO05D010386 4.7e-11 71.6 130 43.1
Manes.04G070400 Manihot esculenta HOM05D008303 ORTHO05D010386 2.3e-10 69.3 135 35.6
SGA_v2.0_scaffold195G40814 Striga asiatica HOM05D008303 ORTHO05D010386 2.3e-10 69.3 113 45.1
Manes.04G070500 Manihot esculenta HOM05D008303 ORTHO05D010386 8.9e-10 67.4 132 37.1
Potri.004G178500 Populus trichocarpa HOM05D008303 ORTHO05D010386 4.4e-09 65.1 124 37.9
Sc18g0006250 Simmondsia chinensis HOM05D008303 ORTHO05D010386 9.9e-09 63.9 131 35.9
Gohir.A01G170900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 1.3e-08 63.5 130 38.5
Thecc.02G054500 Theobroma cacao HOM05D008303 ORTHO05D010386 2.2e-08 62.8 121 39.7
COL.COLO4_36725 Corchorus olitorius HOM05D008303 ORTHO05D010386 2.9e-08 62.4 122 41.8
Nitab4.5_0004867g0100 Nicotiana tabacum HOM05D008303 ORTHO05D010386 2.9e-08 62.4 136 36.8
COL.COLO4_36726 Corchorus olitorius HOM05D008303 ORTHO05D010386 4.9e-08 61.6 120 40.8
Aqoxy5G01096 Aquilegia oxysepala HOM05D008303 ORTHO05D010386 8.3e-08 60.8 133 37.6
Rhsim11G0193900 Rhododendron simsii HOM05D008303 ORTHO05D010386 8.3e-08 60.8 135 38.5
Sopen01g053870 Solanum pennellii HOM05D008303 ORTHO05D010386 1.1e-07 60.5 136 32.4
Ciclev10030089m.g Citrus clementina HOM05D008303 ORTHO05D010386 1.4e-07 60.1 143 33.6
Gorai.002G200800 Gossypium raimondii HOM05D008303 ORTHO05D010386 7.1e-07 57.8 128 37.5
Sabra04G0120100 Salix brachista HOM05D008303 ORTHO05D010386 7.1e-07 57.8 124 34.7
Sed0009685 Sechium edule HOM05D008303 ORTHO05D010386 9.2e-07 57.4 125 37.6
Os02g0667300 Oryza sativa ssp. japonica HOM05D042291 ORTHO05D037032 1.6e-06 56.6 71 47.9
Nitab4.5_0009111g0020 Nicotiana tabacum HOM05D008303 ORTHO05D010386 2.7e-06 55.8 144 35.4
Sabra09G0107400 Salix brachista HOM05D008303 ORTHO05D010386 3.5e-06 55.5 122 41.8
CsaV3_7G001230 Cucumis sativus L. HOM05D008303 ORTHO05D010386 4.6e-06 55.1 125 35.2
Dinv14130 Davidia involucrata HOM05D001535 ORTHO05D003710 4.6e-06 55.1 94 38.3
Gohir.A03G206100 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.6e-06 55.1 134 36.6
Gohir.D01G161900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.6e-06 55.1 130 38.5
Gohir.D02G227500 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.6e-06 55.1 133 36.8
Nn6g31905 Nelumbo nucifera HOM05D008303 ORTHO05D010386 4.6e-06 55.1 146 35.6
Gorai.005G255400 Gossypium raimondii HOM05D008303 ORTHO05D010386 6.0e-06 54.7 134 36.6


User provided reference genes

Program Settings