Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold588G53062 Striga asiatica HOM05D004637 ORTHO05D005320 1.1e-180 636.7 370 100.0
Migut.N02728 Erythranthe guttata HOM05D004637 ORTHO05D005320 2.1e-38 164.1 265 42.6
FAN27G2280 Fragaria x ananassa HOM05D004637 ORTHO05D005320 3.5e-38 163.3 262 43.9
FAN15G1438 Fragaria x ananassa HOM05D004637 ORTHO05D005320 8.7e-37 158.7 262 42.7
QL02p003978 Quercus lobata HOM05D004637 ORTHO05D005320 1.5e-36 157.9 262 41.2
MSTRG.25070 Avicennia marina HOM05D004637 ORTHO05D005320 4.3e-36 156.4 265 42.3
Oeu045704.1 Olea europaea HOM05D004637 ORTHO05D005320 4.3e-36 156.4 270 40.7
Hma1.2p1_0360F.1_g135900 Hydrangea macrophylla HOM05D004637 ORTHO05D005320 7.4e-36 155.6 265 42.3
Cfa018057 Carpinus fangiana HOM05D004637 ORTHO05D005320 9.6e-36 155.2 268 39.9
MELO3C010837.2 Cucumis melo HOM05D004637 ORTHO05D005320 1.3e-35 154.8 262 40.1
CsaV3_2G026470 Cucumis sativus L. HOM05D004637 ORTHO05D005320 1.3e-35 154.8 262 40.1
Medtr1g018800 Medicago truncatula HOM05D004637 ORTHO05D005320 1.6e-35 154.5 263 41.1
Sed0017846 Sechium edule HOM05D004637 ORTHO05D005320 1.6e-35 154.5 262 40.1
Dinv39271 Davidia involucrata HOM05D004637 ORTHO05D005320 2.1e-35 154.1 265 40.8
CSS0035210 Camellia sinensis var. sinensis HOM05D004637 ORTHO05D005320 2.8e-35 153.7 265 41.1
THA.LOC104824981 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 2.8e-35 153.7 262 39.7
Dinv35927 Davidia involucrata HOM05D004637 ORTHO05D005320 3.7e-35 153.3 266 39.8
FvH4_2g33730 Fragaria vesca HOM05D004637 ORTHO05D005320 3.7e-35 153.3 262 41.6
Actinidia08272 Actinidia chinensis HOM05D004637 ORTHO05D005320 4.8e-35 152.9 265 41.5
CiPaw.15G052200 Carya illinoinensis HOM05D004637 ORTHO05D005320 4.8e-35 152.9 284 38.4
FAN24G1748 Fragaria x ananassa HOM05D004637 ORTHO05D005320 4.8e-35 152.9 229 43.7
Prupe.1G430800 Prunus persica HOM05D004637 ORTHO05D005320 4.8e-35 152.9 262 40.1
Aqoxy5G01163 Aquilegia oxysepala HOM05D004637 ORTHO05D005320 6.2e-35 152.5 271 39.1
Atru.chr13.748 Acer truncatum HOM05D004637 ORTHO05D005320 1.1e-34 151.8 262 40.1
Psat6g015000 Pisum sativum HOM05D004637 ORTHO05D005320 1.8e-34 151.0 263 40.7
Glyma.14G085900 Glycine max HOM05D004637 ORTHO05D005320 2.4e-34 150.6 262 39.7
Lj4A64T29 Lonicera japonica HOM05D004637 ORTHO05D005320 2.4e-34 150.6 265 39.6
Oeu037612.1 Olea europaea HOM05D004637 ORTHO05D005320 2.4e-34 150.6 169 53.8
Nitab4.5_0006004g0010 Nicotiana tabacum HOM05D004637 ORTHO05D005320 3.1e-34 150.2 251 41.8
Potri.014G023800 Populus trichocarpa HOM05D004637 ORTHO05D005320 3.1e-34 150.2 262 40.1
TAR381G1093 Trochodendron aralioides HOM05D004637 ORTHO05D005320 3.1e-34 150.2 263 39.2
TAR628G0193 Trochodendron aralioides HOM05D004637 ORTHO05D005320 4.0e-34 149.8 276 38.4
Glyma.17G238800 Glycine max HOM05D004637 ORTHO05D005320 5.3e-34 149.4 262 39.7
CANSAT54G2334 Cannabis sativa HOM05D004637 ORTHO05D005320 6.9e-34 149.1 262 39.3
Cc10_g04860 Coffea canephora HOM05D004637 ORTHO05D005320 6.9e-34 149.1 266 38.7
Duzib093G0653 Durio zibethinus HOM05D004637 ORTHO05D005320 6.9e-34 149.1 242 43.0
TAR628G0069 Trochodendron aralioides HOM05D004637 ORTHO05D005320 6.9e-34 149.1 269 39.0
GSVIVG01009436001 Vitis vinifera HOM05D004637 ORTHO05D005320 6.9e-34 149.1 262 40.5
Lsat_1_v5_gn_1_22460 Lactuca sativa HOM05D004637 ORTHO05D005320 9.0e-34 148.7 265 40.0
unitig_26.g9809 Utricularia gibba HOM05D004637 ORTHO05D005320 1.2e-33 148.3 262 40.1
TPR.G3787 Trifolium pratense HOM05D004637 ORTHO05D005320 1.5e-33 147.9 262 39.7
MD08G1093700 Malus domestica HOM05D004637 ORTHO05D005320 2.0e-33 147.5 262 38.5
Sabra14G0016200 Salix brachista HOM05D004637 ORTHO05D005320 2.0e-33 147.5 262 38.9
SalBow7G4009 Salvia bowleyana HOM05D004637 ORTHO05D005320 2.0e-33 147.5 169 52.7
Lj5g0011390 Lotus japonicus HOM05D004637 ORTHO05D005320 2.6e-33 147.1 262 38.9
Eucgr.F00183 Eucalyptus grandis HOM05D004637 ORTHO05D005320 4.5e-33 146.4 262 40.1
Rhsim07G0225500 Rhododendron simsii HOM05D004637 ORTHO05D005320 4.5e-33 146.4 268 40.3
EL10As7g23788 Beta vulgaris HOM05D004637 ORTHO05D005320 5.8e-33 146.0 262 41.6
ClCG08G016150 Citrullus lanatus HOM05D004637 ORTHO05D005320 7.6e-33 145.6 262 38.9
MD15G1077400 Malus domestica HOM05D004637 ORTHO05D005320 7.6e-33 145.6 262 38.2
Sopen12g030560 Solanum pennellii HOM05D004637 ORTHO05D005320 7.6e-33 145.6 265 38.9
CAN.G1194.20 Capsicum annuum HOM05D004637 ORTHO05D005320 1.0e-32 145.2 265 38.9
Manes.05G177100 Manihot esculenta HOM05D004637 ORTHO05D005320 1.0e-32 145.2 263 37.6
AL6G41290 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 1.3e-32 144.8 262 38.2
PGSC0003DMG400015434 Solanum tuberosum HOM05D004637 ORTHO05D005320 1.3e-32 144.8 265 38.9
Carub.0006s2649 Capsella rubella HOM05D004637 ORTHO05D005320 1.7e-32 144.4 262 37.8
Solyc12g088660.2 Solanum lycopersicum HOM05D004637 ORTHO05D005320 1.7e-32 144.4 265 38.5
THA.LOC104825764 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 1.7e-32 144.4 263 38.0
Ah.08g212480 Amaranthus hybridus HOM05D004637 ORTHO05D005320 2.2e-32 144.1 286 35.3
PGR031G3707 Punica granatum HOM05D004637 ORTHO05D005320 2.9e-32 143.7 263 38.8
Sp6g10610 Schrenkiella parvula HOM05D004637 ORTHO05D005320 2.9e-32 143.7 262 38.9
Sc02g0007520 Simmondsia chinensis HOM05D004637 ORTHO05D005320 2.9e-32 143.7 290 35.5
VMungo0647G2267 Vigna mungo HOM05D004637 ORTHO05D005320 2.9e-32 143.7 262 38.5
AT4G07390 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 3.8e-32 143.3 262 37.8
CiPaw.16G038000 Carya illinoinensis HOM05D004637 ORTHO05D005320 4.9e-32 142.9 258 39.1
Nitab4.5_0006486g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 6.5e-32 142.5 280 37.5
CARHR288440 Cardamine hirsuta HOM05D004637 ORTHO05D005320 8.4e-32 142.1 262 37.4
Nn5g30394 Nelumbo nucifera HOM05D004637 ORTHO05D005320 8.4e-32 142.1 262 38.5
vmacro21608 Vaccinium macrocarpon HOM05D004637 ORTHO05D005320 8.4e-32 142.1 168 50.6
Manes.18G041200 Manihot esculenta HOM05D004637 ORTHO05D005320 1.4e-31 141.4 166 49.4
Zm00001eb104960 Zea mays HOM05D004637 ORTHO05D005320 1.4e-31 141.4 263 38.4
HanXRQChr10g0309661 Helianthus annuus HOM05D004637 ORTHO05D005320 1.9e-31 141.0 265 39.2
Os07g0479200 Oryza sativa ssp. japonica HOM05D004637 ORTHO05D005320 1.9e-31 141.0 263 37.3
Thecc.08G001300 Theobroma cacao HOM05D004637 ORTHO05D005320 2.5e-31 140.6 262 38.2
BcaB01g02883 Brassica carinata HOM05D004637 ORTHO05D005320 3.2e-31 140.2 262 37.8
A03p27890 Brassica napus HOM05D004637 ORTHO05D005320 3.2e-31 140.2 262 37.8
C03p33670 Brassica napus HOM05D004637 ORTHO05D005320 3.2e-31 140.2 262 37.8
BolC3t15687H Brassica oleracea HOM05D004637 ORTHO05D005320 3.2e-31 140.2 262 37.8
BraA03t12001Z Brassica rapa HOM05D004637 ORTHO05D005320 3.2e-31 140.2 262 37.8
Thhalv10028929m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 3.2e-31 140.2 262 37.4
PSO170G3952 Papaver somniferum HOM05D004637 ORTHO05D005320 4.2e-31 139.8 262 37.8
PSO210G5934 Papaver somniferum HOM05D004637 ORTHO05D005320 4.2e-31 139.8 262 37.8
Aa31LG8G3140 Aethionema arabicum HOM05D004637 ORTHO05D005320 7.1e-31 139.0 262 37.4
Phvul.001G024600 Phaseolus vulgaris HOM05D004637 ORTHO05D005320 7.1e-31 139.0 262 38.2
TWI36G0292 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 7.1e-31 139.0 262 37.8
Peaxi162Scf00160g00034 Petunia axillaris HOM05D004637 ORTHO05D005320 1.2e-30 138.3 169 48.5
CDE01G0812 Ceratophyllum demersum HOM05D004637 ORTHO05D005320 1.6e-30 137.9 259 37.8
AUR62002897 Chenopodium quinoa HOM05D004637 ORTHO05D005320 2.1e-30 137.5 163 48.5
AUR62035253 Chenopodium quinoa HOM05D004637 ORTHO05D005320 2.1e-30 137.5 163 48.5
RcHm_v2.0_Chr6g0308821 Rosa chinensis HOM05D004637 ORTHO05D005320 2.1e-30 137.5 263 37.3
TWI56G1297 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 2.7e-30 137.1 262 38.2
Cpa.g.sc21.155 Carica papaya HOM05D004637 ORTHO05D005320 7.9e-30 135.6 164 48.8
Thhalv10015267m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 1.0e-29 135.2 262 36.3
BcaC01g04787 Brassica carinata HOM05D004637 ORTHO05D005320 2.3e-29 134.0 165 47.3
Eucgr.F02306 Eucalyptus grandis HOM05D004637 ORTHO05D005320 2.3e-29 134.0 262 35.5
Gorai.009G215300 Gossypium raimondii HOM05D004637 ORTHO05D005320 3.0e-29 133.7 263 35.4
RcHm_v2.0_Chr0c32g0501551 Rosa chinensis HOM05D004637 ORTHO05D005320 3.0e-29 133.7 251 38.6
arahy.Tifrunner.gnm1.ann1.RG91LC Arachis hypogaea HOM05D004637 ORTHO05D005320 3.9e-29 133.3 248 39.9
arahy.Tifrunner.gnm1.ann1.UI0UDP Arachis hypogaea HOM05D004637 ORTHO05D005320 3.9e-29 133.3 248 39.9
HPP92_003482 Vanilla planifolia HOM05D004637 ORTHO05D005320 5.1e-29 132.9 265 35.5
AL8G35940 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 1.1e-28 131.7 262 35.9
Gohir.D05G208900 Gossypium hirsutum HOM05D004637 ORTHO05D005320 1.5e-28 131.3 262 36.6
Gohir.A05G205600 Gossypium hirsutum HOM05D004637 ORTHO05D005320 1.9e-28 131.0 263 35.7
Haze_18072 Corylus avellana HOM05D004637 ORTHO05D005320 2.5e-28 130.6 166 48.2
Carub.0008s2014 Capsella rubella HOM05D004637 ORTHO05D005320 4.3e-28 129.8 262 34.7
CARHR285840 Cardamine hirsuta HOM05D004637 ORTHO05D005320 5.7e-28 129.4 262 34.4
PGR083G2827 Punica granatum HOM05D004637 ORTHO05D005320 5.7e-28 129.4 259 36.3
Lalb_Chr22g0354941 Lupinus albus HOM05D004637 ORTHO05D005320 4.8e-27 126.3 164 46.3
Hund04212 Selenicereus undatus HOM05D004637 ORTHO05D005320 6.3e-27 125.9 163 44.8
Sp6g21160 Schrenkiella parvula HOM05D004637 ORTHO05D005320 1.1e-26 125.2 166 45.8
SMO365G0080 Selaginella moellendorffii HOM05D004637 ORTHO05D005320 4.1e-26 123.2 262 34.4
AT5G59470 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 6.9e-26 122.5 166 44.0
Mapoly0040s0013 Marchantia polymorpha HOM05D004637 ORTHO05D005320 6.9e-26 122.5 258 34.1
BcaC01g04795 Brassica carinata HOM05D004637 ORTHO05D005320 1.2e-25 121.7 250 36.8
BolC3t13818H Brassica oleracea HOM05D004637 ORTHO05D005320 2.0e-25 120.9 258 36.0
SEGI_04928 Sequoiadendron giganteum HOM05D004637 ORTHO05D005320 1.7e-24 117.9 262 33.2
C02p12470 Brassica napus HOM05D004637 ORTHO05D005320 2.2e-24 117.5 262 33.6
BcaC03g14011 Brassica carinata HOM05D004637 ORTHO05D005320 2.9e-24 117.1 262 33.6
BolC2t07347H Brassica oleracea HOM05D004637 ORTHO05D005320 2.9e-24 117.1 262 33.6
A02p07110 Brassica napus HOM05D004637 ORTHO05D005320 3.8e-24 116.7 263 33.8
BcaB05g22509 Brassica carinata HOM05D004637 ORTHO05D005320 5.0e-24 116.3 262 34.0
BraA02t05792Z Brassica rapa HOM05D004637 ORTHO05D005320 5.0e-24 116.3 263 33.8
Pp3c3_8350 Physcomitrium patens HOM05D004637 ORTHO05D005320 3.2e-23 113.6 263 33.1
Ciclev10002344m.g Citrus clementina HOM05D004637 ORTHO05D005320 1.2e-22 111.7 263 31.6
AagrBONN_evm.TU.Sc2ySwM_344.2883 Anthoceros agrestis HOM05D004637 ORTHO05D005320 3.5e-22 110.2 159 43.4
CBR_g40794 Chara braunii HOM05D004637 ORTHO05D005320 2.5e-20 104.0 256 32.8
Peaxi162Scf01087g00125 Petunia axillaris HOM05D004637 ORTHO05D005320 2.2e-19 100.9 150 44.7
Actinidia38079 Actinidia chinensis HOM05D004637 ORTHO05D005320 6.3e-19 99.4 231 35.9
ECA247G2514 Erigeron canadensis HOM05D004637 ORTHO05D005320 2.4e-18 97.4 150 42.0
Nitab4.5_0004339g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 2.4e-18 97.4 171 39.8
Pp3c4_22670 Physcomitrium patens HOM05D004637 ORTHO05D005320 2.4e-18 97.4 258 29.5
FAN20G0860 Fragaria x ananassa HOM05D004637 ORTHO05D005320 5.3e-18 96.3 224 34.4
QL07p047618 Quercus lobata HOM05D004637 ORTHO05D005320 5.3e-18 96.3 54 85.2
CBR_g8228 Chara braunii HOM05D004637 ORTHO05D005320 1.2e-17 95.1 257 30.7
HPP92_026880 Vanilla planifolia HOM05D004637 ORTHO05D005320 2.0e-17 94.4 151 41.7
RcHm_v2.0_Chr1g0356881 Rosa chinensis HOM05D004637 ORTHO05D005320 1.0e-16 92.0 63 77.8
Nitab4.5_0010118g0060 Nicotiana tabacum HOM05D004637 ORTHO05D005320 6.5e-16 89.4 152 42.1
QL11p041834 Quercus lobata HOM05D001716 ORTHO05D004234 1.1e-15 88.6 47 87.2
Peaxi162Scf00160g00035 Petunia axillaris HOM05D004637 ORTHO05D005320 5.5e-15 86.3 52 80.8
COL.COLO4_10117 Corchorus olitorius HOM05D004637 ORTHO05D005320 5.7e-12 76.3 49 71.4
BcaC01g06520 Brassica carinata HOM05D004637 ORTHO05D005320 2.6e-09 67.4 48 64.6
HPP92_014526 Vanilla planifolia HOM05D004637 ORTHO05D005320 1.6e-06 58.2 52 48.1


User provided reference genes

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