Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 5.3e-131 471.1 246 100.0
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 4.2e-112 408.3 263 86.3
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 3.6e-87 325.5 242 73.6
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 4.0e-86 322.0 246 72.8
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 4.4e-69 265.4 253 58.5
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 3.7e-68 262.3 253 58.1
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 4.9e-68 261.9 212 68.4
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 7.0e-67 258.1 244 59.4
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.5e-64 250.4 247 57.9
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 2.5e-64 249.6 253 55.7
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 4.3e-64 248.8 246 57.7
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 5.6e-64 248.4 244 61.1
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 4.7e-63 245.4 249 57.8
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.0e-62 244.2 245 58.0
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 1.4e-62 243.8 245 56.7
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.4e-62 243.8 245 56.3
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 4.4e-61 238.8 251 55.4
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 7.5e-61 238.0 245 55.1
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 9.8e-61 237.7 245 55.9
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.3e-60 237.3 246 54.5
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.9e-60 236.1 253 55.3
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 4.9e-60 235.3 253 54.9
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 6.4e-60 235.0 243 56.8
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 1.1e-59 234.2 245 58.8
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 2.4e-59 233.0 246 54.9
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 2.4e-59 233.0 245 55.5
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.4e-59 233.0 245 55.5
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 9.2e-59 231.1 243 54.7
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 1.2e-58 230.7 263 52.9
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 1.6e-58 230.3 256 55.1
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 1.6e-58 230.3 245 54.3
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 2.0e-58 229.9 245 55.5
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.7e-58 229.6 245 55.9
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 3.5e-58 229.2 255 52.2
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 5.9e-58 228.4 245 55.9
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 1.0e-57 227.6 245 54.7
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.0e-57 227.6 246 54.1
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.3e-57 227.3 244 55.3
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 1.7e-57 226.9 245 53.5
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 6.6e-57 224.9 244 54.1
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 8.6e-57 224.6 246 53.7
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 2.5e-56 223.0 246 53.7
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 3.3e-56 222.6 253 53.0
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 5.6e-56 221.9 244 52.9
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 5.6e-56 221.9 243 56.4
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 7.3e-56 221.5 246 56.1
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.2e-55 220.7 245 51.4
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 2.1e-55 219.9 249 53.0
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.1e-55 219.9 248 52.8
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.8e-55 219.5 246 54.1
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 6.2e-55 218.4 248 54.0
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 8.0e-55 218.0 246 52.0
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.3e-54 216.5 245 50.6
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 2.3e-54 216.5 246 55.3
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 3.1e-54 216.1 245 51.4
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 8.9e-54 214.5 249 51.8
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.2e-53 214.2 294 46.9
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 2.6e-53 213.0 255 49.8
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 4.4e-53 212.2 255 48.6
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.4e-51 207.2 228 54.8
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 3.2e-51 206.1 247 52.6
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 5.4e-51 205.3 253 51.8
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 7.0e-51 204.9 210 57.6
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 7.0e-51 204.9 246 52.0
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.6e-50 203.8 139 78.4
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.7e-49 200.3 252 48.8
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 8.6e-49 198.0 233 50.2
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 8.6e-49 198.0 211 57.8
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 5.6e-48 195.3 245 51.8
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 7.3e-48 194.9 245 49.4
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 3.6e-47 192.6 221 53.4
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 6.2e-47 191.8 227 53.7
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 1.4e-46 190.7 248 48.4
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 2.3e-46 189.9 231 51.5
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 4.0e-46 189.1 212 51.4
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 6.8e-46 188.3 230 52.2
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.8e-46 188.3 273 46.5
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 2.0e-45 186.8 253 50.2
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 5.8e-45 185.3 250 43.6
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 4.9e-44 182.2 209 54.1
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 9.2e-43 177.9 245 48.2
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 3.5e-42 176.0 124 74.2
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.6e-42 175.6 124 74.2
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 5.6e-40 168.7 242 42.1
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.2e-39 167.5 93 91.4
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.8e-39 166.4 242 41.7
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.8e-39 166.4 242 41.7
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.8e-39 166.4 242 41.7
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 6.2e-39 165.2 242 41.7
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 6.2e-39 165.2 242 40.9
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 8.1e-39 164.9 242 42.6
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 8.1e-39 164.9 95 87.4
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 8.1e-39 164.9 99 83.8
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 1.8e-38 163.7 242 42.1
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 2.3e-38 163.3 242 40.9
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 3.1e-38 162.9 242 41.7
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 5.2e-38 162.2 242 41.7
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 2.6e-37 159.8 302 39.4
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.3e-36 157.5 212 47.6
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 3.8e-36 156.0 103 77.7
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 4.9e-36 155.6 98 80.6
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 1.9e-35 153.7 255 40.8
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 2.4e-35 153.3 242 39.3
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 5.4e-35 152.1 192 49.5
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 7.8e-34 148.3 233 43.8
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 3.0e-33 146.4 179 50.3
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 5.1e-33 145.6 99 72.7
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 7.3e-32 141.7 250 37.6
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 7.3e-32 141.7 269 38.3
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.4e-30 137.5 186 49.5
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 3.4e-29 132.9 242 37.2
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 4.3e-24 115.9 111 61.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 4.3e-24 115.9 252 31.3
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 1.6e-23 114.0 267 31.8
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 8.1e-23 111.7 230 35.2
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 2.4e-22 110.2 180 45.0
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 3.1e-22 109.8 180 45.0
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 3.8e-20 102.8 62 83.9
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 2.1e-18 97.1 62 82.3
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 6.0e-18 95.5 132 49.2
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 3.9e-17 92.8 157 40.1
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 5.1e-17 92.4 193 38.9
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.1e-16 91.3 147 41.5
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 3.3e-16 89.7 66 69.7
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 4.3e-16 89.4 152 44.7
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.6e-16 89.0 158 39.9
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.3e-15 87.8 158 39.9
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 8.1e-15 85.1 220 30.9
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.1e-14 84.7 174 35.6
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.0e-14 82.8 189 34.9
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 3.4e-13 79.7 53 71.7
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.3e-12 77.8 62 72.6
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 5.5e-11 72.4 98 45.9
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 1.0e-09 68.2 145 40.0
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.5e-08 63.5 124 38.7
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.6e-07 60.8 43 60.5
CAN.G257.103 Capsicum annuum HOM05D005370 ORTHO05D006659 2.4e-06 57.0 54 59.3


User provided reference genes

Program Settings