Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20302 Striga asiatica HOM05D017547 ORTHO05D014211 3.1e-200 702.2 535 100.0
SGA_v2.0_scaffold552G52881 Striga asiatica HOM05D017547 ORTHO05D014211 2.0e-74 284.3 174 83.3
SGA_v2.0_scaffold552G52879 Striga asiatica HOM05D017547 ORTHO05D405787 1.6e-71 274.6 252 89.3
SGA_v2.0_scaffold10G05288 Striga asiatica HOM05D017547 ORTHO05D014211 6.2e-68 262.7 466 45.9
SGA_v2.0_scaffold228G43261 Striga asiatica HOM05D017547 ORTHO05D006664 6.4e-57 226.1 263 54.4
SGA_v2.0_scaffold1G00176 Striga asiatica HOM05D017547 ORTHO05D402198 1.2e-55 221.9 263 53.2
SGA_v2.0_scaffold3G01441 Striga asiatica HOM05D017547 ORTHO05D014211 5.3e-51 206.5 129 82.2
SGA_v2.0_scaffold11G05546 Striga asiatica HOM05D016084 ORTHO05D014211 1.4e-16 92.0 179 32.4
Migut.O00430 Erythranthe guttata HOM05D016084 ORTHO05D014211 4.2e-16 90.5 176 30.1
SGA_v2.0_scaffold124G33561 Striga asiatica HOM05D016084 ORTHO05D014211 4.7e-15 87.0 117 38.5
SGA_v2.0_scaffold446G51736 Striga asiatica HOM05D016084 ORTHO05D014211 7.9e-15 86.3 117 37.6
Lj8C477G0 Lonicera japonica HOM05D016084 ORTHO05D004107 3.7e-12 77.4 150 33.3
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 1.8e-11 75.1 120 33.3
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-10 71.6 120 32.5
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 1.0e-09 69.3 101 32.7
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 1.3e-09 68.9 100 33.0
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 6.5e-09 66.6 121 30.6
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 2.5e-08 64.7 191 27.2
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-08 64.7 147 30.6
Dinv24545 Davidia involucrata HOM05D008850 ORTHO05D004107 3.2e-08 64.3 202 27.7
Migut.E00584 Erythranthe guttata HOM05D016084 ORTHO05D014211 9.4e-08 62.8 171 29.2
Dinv22994 Davidia involucrata HOM05D009809 ORTHO05D004107 2.1e-07 61.6 128 31.2
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.6e-07 60.8 178 27.5
SGA_v2.0_scaffold68G22968 Striga asiatica HOM05D063762 ORTHO05D014211 3.6e-07 60.8 145 27.6
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.1e-07 60.1 244 23.4
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.0e-07 59.7 220 24.1
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.0e-07 59.7 178 28.1
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 1.0e-06 59.3 98 30.6
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-06 58.9 203 25.6
CSS0040604 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 1.8e-06 58.5 98 30.6
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 1.8e-06 58.5 101 27.7
RhsimUnG0208000 Rhododendron simsii HOM05D008850 ORTHO05D004107 2.3e-06 58.2 97 26.8
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 6.7e-06 56.6 94 29.8
Dinv11566 Davidia involucrata HOM05D008850 ORTHO05D004107 6.7e-06 56.6 81 38.3
Rhsim01G0019400 Rhododendron simsii HOM05D008850 ORTHO05D004107 6.7e-06 56.6 111 27.0
Rhsim04G0035600 Rhododendron simsii HOM05D000054 ORTHO05D000171 6.7e-06 56.6 100 34.0
QL09p032027 Quercus lobata HOM05D000017 ORTHO05D000013 8.8e-06 56.2 131 32.1


User provided reference genes

Program Settings