Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 2.6e-52 208.4 101 100.0
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.5e-23 112.8 101 63.4
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 3.3e-23 111.7 101 60.4
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-23 111.3 101 62.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-23 111.3 101 62.4
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 9.7e-23 110.2 97 64.9
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.7e-22 109.4 101 61.4
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 2.8e-22 108.6 101 61.4
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.1e-21 106.7 101 58.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.4e-21 105.5 101 58.4
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.1e-21 104.8 97 56.7
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 6.9e-21 104.0 97 60.8
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.2e-20 103.2 101 56.4
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.2e-20 103.2 100 56.0
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.5e-20 102.8 101 57.4
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 3.4e-20 101.7 93 61.3
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.5e-20 101.3 101 56.4
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.5e-20 101.3 101 56.4
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 7.7e-20 100.5 101 56.4
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.7e-20 100.5 101 56.4
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.0e-19 100.1 101 56.4
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.3e-19 99.8 97 55.7
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.3e-19 99.8 100 54.0
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.3e-19 99.8 101 57.4
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 54.5
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 56.4
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 56.4
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 56.4
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 56.4
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 55.4
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.7e-19 99.4 101 56.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.7e-19 99.4 100 55.0
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.2e-19 99.0 95 56.8
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.9e-19 98.6 97 55.7
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.9e-19 98.6 101 54.5
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.9e-19 98.6 101 54.5
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.9e-19 98.6 101 57.4
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 2.9e-19 98.6 93 58.1
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 3.8e-19 98.2 90 60.0
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 3.8e-19 98.2 93 59.1
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 3.8e-19 98.2 101 55.4
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.8e-19 98.2 101 54.5
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 3.8e-19 98.2 131 48.9
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 5.0e-19 97.8 101 55.4
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 5.0e-19 97.8 101 54.5
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.0e-19 97.8 101 53.5
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 5.0e-19 97.8 95 55.8
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 6.5e-19 97.4 101 54.5
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 8.5e-19 97.1 95 54.7
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.1e-18 96.7 94 57.4
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.1e-18 96.7 97 55.7
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.1e-18 96.7 101 54.5
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.9e-18 95.9 92 56.5
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.9e-18 95.9 101 55.4
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.9e-18 95.9 101 55.4
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.9e-18 95.9 96 54.2
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 2.5e-18 95.5 93 54.8
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.5e-18 95.5 96 55.2
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 3.2e-18 95.1 96 56.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.2e-18 95.1 101 55.4
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.2e-18 95.1 97 54.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.2e-18 95.1 97 54.6
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.2e-18 94.7 101 54.5
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 4.2e-18 94.7 93 57.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 4.2e-18 94.7 95 54.7
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 5.5e-18 94.4 97 54.6
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.2e-17 93.2 93 58.1
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.2e-17 93.2 94 55.3
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.2e-17 93.2 97 53.6
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.6e-17 92.8 92 56.5
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 4.7e-17 91.3 162 39.5
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 7.9e-17 90.5 92 54.3
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 7.9e-17 90.5 92 54.3
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 7.9e-17 90.5 95 53.7
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.0e-16 90.1 92 54.3
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.0e-16 90.1 101 49.5
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.0e-16 90.1 97 51.5
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 3.9e-16 88.2 92 53.3
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 5.1e-16 87.8 94 52.1
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 8.8e-16 87.0 88 54.5
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.1e-15 86.7 92 52.2
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.1e-15 86.7 94 52.1
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.5e-15 86.3 92 51.1
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.5e-15 86.3 92 51.1
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.5e-15 86.3 100 50.0
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 2.6e-15 85.5 101 50.5
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.3e-15 85.1 93 49.5
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.8e-14 82.0 97 49.5
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.1e-13 80.1 41 87.8
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.7e-11 72.8 96 43.8
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.7e-11 72.8 44 79.5
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 6.5e-11 70.9 37 83.8
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.9e-10 69.3 42 81.0
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 3.2e-10 68.6 94 42.6
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.2e-10 68.2 42 76.2
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 7.2e-10 67.4 41 73.2
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.2e-10 67.4 43 67.4
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.2e-09 66.6 42 76.2
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.2e-09 66.6 78 50.0
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 2.1e-09 65.9 36 83.3
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.7e-09 65.5 79 51.9
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.7e-09 64.7 41 73.2
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 6.1e-09 64.3 41 73.2
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.8e-08 62.8 41 73.2
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.8e-08 62.8 73 50.7
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 3.0e-08 62.0 41 73.2
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 4.0e-08 61.6 100 42.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 8.8e-08 60.5 34 79.4
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 2.6e-07 58.9 36 77.8
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 7.5e-07 57.4 31 83.9
Hma1.2p1_0643F.1_g194720 Hydrangea macrophylla HOM05D006941 ORTHO05D008361 7.5e-07 57.4 31 83.9
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 9.7e-07 57.0 32 84.4
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 1.3e-06 56.6 29 89.7
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 1.3e-06 56.6 31 83.9
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.2e-06 55.8 30 83.3


User provided reference genes

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