Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20265 Striga asiatica HOM05D005408 ORTHO05D006790 8.3e-97 357.1 184 100.0
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 1.6e-23 113.6 77 76.6
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 1.8e-11 73.6 82 50.0
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 1.0e-09 67.8 82 52.4
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.7e-09 67.0 82 51.2
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 5.0e-09 65.5 86 47.7
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 5.0e-09 65.5 196 30.6
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 5.0e-09 65.5 89 44.9
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 1.1e-08 64.3 83 47.0
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 2.5e-08 63.2 89 43.8
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 3.2e-08 62.8 79 45.6
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 4.2e-08 62.4 89 43.8
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 4.2e-08 62.4 77 48.1
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 4.2e-08 62.4 89 46.1
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 4.2e-08 62.4 87 48.3
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 5.5e-08 62.0 87 44.8
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 1.2e-07 60.8 85 45.9
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.2e-07 60.8 85 45.9
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.2e-07 60.8 88 44.3
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 1.2e-07 60.8 83 49.4
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 1.2e-07 60.8 80 45.0
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 1.6e-07 60.5 78 43.6
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 2.1e-07 60.1 88 39.8
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 2.7e-07 59.7 89 42.7
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 2.7e-07 59.7 83 43.4
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.7e-07 59.7 90 41.1
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 2.7e-07 59.7 85 43.5
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 3.6e-07 59.3 90 41.1
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 4.7e-07 58.9 90 45.6
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 4.7e-07 58.9 84 46.4
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 6.1e-07 58.5 89 42.7
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 6.1e-07 58.5 88 43.2
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 6.1e-07 58.5 85 43.5
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 6.1e-07 58.5 93 43.0
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 6.1e-07 58.5 77 46.8
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 1.0e-06 57.8 90 40.0
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.0e-06 57.8 89 43.8
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 1.0e-06 57.8 110 36.4
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.0e-06 57.8 89 40.4
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.4e-06 57.4 89 41.6
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.4e-06 57.4 77 41.6
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 1.8e-06 57.0 91 39.6
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 1.8e-06 57.0 88 42.0
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 4.0e-06 55.8 88 39.8
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 4.0e-06 55.8 82 46.3
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 4.0e-06 55.8 89 38.2
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 5.2e-06 55.5 89 40.4
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 5.2e-06 55.5 79 45.6
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 6.7e-06 55.1 89 40.4
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 6.7e-06 55.1 89 41.6
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 6.7e-06 55.1 93 39.8
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 6.7e-06 55.1 85 43.5
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 8.8e-06 54.7 89 39.3
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 8.8e-06 54.7 88 38.6


User provided reference genes

Program Settings