Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.6e-183 646.0 332 100.0
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.4e-86 323.9 388 52.1
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 2.8e-63 246.5 439 39.9
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.1e-62 244.6 428 40.0
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 3.8e-60 236.1 395 40.5
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 9.2e-54 214.9 397 38.8
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.3e-52 210.3 399 37.8
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 8.6e-52 208.4 400 38.0
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.5e-51 207.6 432 36.6
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.9e-51 207.2 445 36.9
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.8e-50 203.4 405 38.3
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 1.2e-48 198.0 344 39.8
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.2e-48 198.0 429 36.1
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 6.4e-47 192.2 173 60.7
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 6.4e-47 192.2 431 35.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.4e-46 191.0 360 38.3
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.2e-45 188.0 448 34.4
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.3e-44 183.7 415 34.5
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.3e-44 183.7 388 36.6
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.9e-44 183.0 406 37.2
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 8.6e-44 181.8 426 36.2
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.5e-43 181.0 373 38.1
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 4.3e-43 179.5 377 37.9
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 2.8e-42 176.8 422 34.8
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 8.1e-42 175.3 424 34.7
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.8e-41 174.1 396 37.6
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.8e-41 174.1 396 37.6
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 2.3e-41 173.7 408 37.7
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.3e-41 173.7 432 34.0
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 2.3e-41 173.7 407 34.2
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 8.9e-41 171.8 427 33.3
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 2.0e-40 170.6 430 33.0
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.6e-40 170.2 396 37.4
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 5.8e-40 169.1 390 33.6
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 7.5e-40 168.7 422 33.6
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.3e-39 167.9 413 31.5
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-39 167.9 400 36.5
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 2.2e-39 167.2 426 31.7
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 6.4e-39 165.6 435 31.3
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.3e-39 165.2 388 34.5
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 8.3e-39 165.2 163 54.0
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.4e-38 164.5 391 33.0
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 3.2e-38 163.3 408 35.3
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.6e-37 161.0 418 32.1
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.6e-37 161.0 462 29.0
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 2.1e-37 160.6 271 40.2
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.1e-37 160.6 196 45.9
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 2.7e-37 160.2 426 32.2
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 6.0e-37 159.1 415 32.0
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 6.0e-37 159.1 410 33.2
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.0e-36 158.3 318 36.5
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.7e-36 157.5 180 48.3
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.7e-36 157.5 420 31.7
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 6.6e-36 155.6 404 33.2
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 2.5e-35 153.7 338 35.8
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 3.3e-35 153.3 241 41.9
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 5.6e-35 152.5 389 33.4
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 7.3e-35 152.1 394 32.2
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 9.5e-35 151.8 431 30.6
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 9.5e-35 151.8 318 35.2
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 3.4e-32 143.3 268 35.4
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 5.8e-32 142.5 451 31.3
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 5.8e-32 142.5 407 32.7
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 9.9e-32 141.7 427 30.4
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.7e-31 141.0 290 36.2
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 1.1e-30 138.3 503 29.2
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.0e-28 131.7 161 48.4
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 2.3e-28 130.6 489 28.0
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 3.9e-28 129.8 300 33.7
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.7e-28 128.6 370 34.6
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.3e-27 126.7 390 31.3
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 1.6e-26 124.4 303 33.3
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.1e-26 122.1 127 50.4
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.4e-25 120.6 353 29.7
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 6.9e-25 119.0 344 33.4
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.0e-24 117.5 97 59.8
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.4e-22 111.3 152 40.1
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 6.0e-21 105.9 320 32.2
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 8.7e-20 102.1 302 30.8
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 1.5e-19 101.3 366 28.7
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.9e-19 100.9 485 25.6
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 1.3e-18 98.2 354 28.0
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 3.1e-17 93.6 309 29.8
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 2.6e-16 90.5 99 44.4
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 3.5e-13 80.1 100 41.0
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 2.8e-10 70.5 402 26.6
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 6.2e-10 69.3 118 35.6
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 9.0e-09 65.5 175 30.9
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.4e-08 63.5 149 36.2
HanXRQChr03g0080081 Helianthus annuus HOM05D007369 ORTHO05D009369 8.4e-07 58.9 146 33.6
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 5.5e-06 56.2 58 41.4


User provided reference genes

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