Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 9.6e-178 626.7 315 100.0
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 1.9e-117 426.4 316 70.6
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 6.1e-108 394.8 256 75.8
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 2.7e-103 379.4 345 58.6
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 3.0e-102 375.9 292 65.4
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 3.9e-102 375.6 301 64.1
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.2e-100 370.5 351 58.4
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.2e-100 370.5 292 66.1
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 1.6e-100 370.2 293 64.8
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 3.6e-100 369.0 300 64.0
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 4.7e-100 368.6 330 59.7
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 6.2e-100 368.2 309 64.1
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 8.0e-100 367.9 293 64.2
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 1.8e-99 366.7 352 57.4
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 5.2e-99 365.2 350 55.4
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 5.2e-99 365.2 291 63.6
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 6.8e-99 364.8 350 56.3
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 1.5e-98 363.6 314 61.1
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 4.4e-98 362.1 281 65.8
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 4.4e-98 362.1 345 56.8
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 4.4e-98 362.1 298 63.8
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 5.8e-98 361.7 292 63.7
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 2.2e-97 359.8 296 62.8
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 2.9e-97 359.4 352 56.5
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 3.7e-97 359.0 343 58.6
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 4.9e-97 358.6 333 57.1
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 6.4e-97 358.2 272 67.3
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 1.1e-96 357.5 292 63.7
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 1.4e-96 357.1 298 62.4
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 1.4e-96 357.1 363 55.6
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.9e-96 356.7 298 62.1
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.9e-96 356.7 287 64.8
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 4.1e-96 355.5 279 63.8
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 5.4e-96 355.1 351 57.3
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 5.4e-96 355.1 304 60.2
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 7.0e-96 354.8 352 56.2
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 7.0e-96 354.8 340 56.5
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 9.2e-96 354.4 348 56.9
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.2e-95 354.0 287 64.1
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 1.6e-95 353.6 295 62.7
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 1.6e-95 353.6 347 57.6
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 2.0e-95 353.2 268 67.5
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 2.0e-95 353.2 331 57.7
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 3.5e-95 352.4 286 65.4
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 1.0e-94 350.9 295 62.4
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.3e-94 349.7 296 61.1
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 3.0e-94 349.4 287 63.4
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 3.0e-94 349.4 339 56.9
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 5.0e-94 348.6 347 55.6
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.1e-93 347.4 282 62.8
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 1.1e-93 347.4 308 60.4
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 1.9e-93 346.7 347 55.3
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 3.3e-93 345.9 294 61.9
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 4.3e-93 345.5 299 60.5
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 5.6e-93 345.1 292 61.0
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 7.3e-93 344.7 347 53.9
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.8e-92 342.8 341 56.0
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 3.6e-92 342.4 304 60.5
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 3.6e-92 342.4 339 55.8
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 3.6e-92 342.4 332 56.9
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 4.7e-92 342.0 310 59.4
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 5.2e-91 338.6 353 55.2
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 1.2e-90 337.4 304 57.6
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 7.5e-90 334.7 288 61.5
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 7.5e-90 334.7 391 52.9
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 9.9e-90 334.3 322 56.2
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 1.3e-89 334.0 347 53.9
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 4.9e-89 332.0 265 63.4
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 6.4e-89 331.6 323 56.0
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 6.4e-89 331.6 335 54.6
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 1.4e-88 330.5 297 57.2
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 1.4e-88 330.5 292 57.5
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.9e-88 330.1 323 54.5
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 1.9e-88 330.1 294 57.5
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 1.9e-88 330.1 311 56.9
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 2.4e-88 329.7 271 61.6
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 3.2e-88 329.3 317 54.9
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.2e-88 329.3 264 61.7
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 4.1e-88 328.9 345 54.8
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.1e-88 328.9 310 55.5
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 5.4e-88 328.6 341 54.5
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 7.1e-88 328.2 389 49.6
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 1.2e-87 327.4 285 59.6
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 1.2e-87 327.4 285 57.9
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 2.1e-87 326.6 328 53.4
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 4.6e-87 325.5 334 54.2
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 4.6e-87 325.5 364 50.0
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 4.6e-87 325.5 321 53.3
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 6.0e-87 325.1 319 54.5
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 6.0e-87 325.1 348 50.6
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 7.8e-87 324.7 318 54.7
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 7.8e-87 324.7 306 56.5
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 1.0e-86 324.3 314 55.4
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 3.0e-86 322.8 334 53.9
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 3.9e-86 322.4 339 53.4
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 3.9e-86 322.4 322 55.0
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 6.6e-86 321.6 301 57.1
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 8.6e-86 321.2 304 55.6
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 8.6e-86 321.2 274 59.1
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 1.1e-85 320.9 342 53.2
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 1.9e-85 320.1 261 60.9
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 2.5e-85 319.7 263 60.5
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 2.5e-85 319.7 301 55.8
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 4.3e-85 318.9 301 56.5
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 4.3e-85 318.9 289 58.5
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 4.3e-85 318.9 318 55.3
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 7.3e-85 318.2 301 54.2
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 9.5e-85 317.8 262 62.2
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 2.8e-84 316.2 361 50.1
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 1.1e-83 314.3 265 61.1
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.8e-83 313.5 303 56.4
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 2.4e-83 313.2 352 49.4
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 2.6e-82 309.7 358 49.7
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 4.9e-81 305.4 314 52.9
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 6.4e-81 305.1 317 51.7
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 8.4e-81 304.7 309 55.3
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 1.4e-80 303.9 328 51.8
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 1.9e-80 303.5 270 57.0
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 7.8e-79 298.1 263 57.0
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 3.9e-78 295.8 339 48.7
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 5.6e-77 292.0 316 50.0
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 1.8e-75 287.0 335 50.4
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 4.9e-73 278.9 228 62.7
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 3.2e-72 276.2 308 52.6
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 7.8e-71 271.6 251 57.4
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 1.5e-69 267.3 261 52.1
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 5.6e-69 265.4 230 57.8
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 7.3e-69 265.0 351 47.9
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 6.9e-67 258.5 236 62.3
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 1.2e-66 257.7 304 46.1
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 3.8e-65 252.7 183 69.9
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 1.2e-63 247.7 295 48.1
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 2.1e-63 246.9 241 55.6
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 1.0e-62 244.6 270 54.4
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 9.6e-61 238.0 186 64.5
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 2.1e-60 236.9 263 46.4
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 1.4e-59 234.2 173 65.3
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 4.0e-59 232.6 279 48.4
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 3.4e-58 229.6 317 40.7
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 7.6e-58 228.4 181 64.1
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 9.9e-58 228.0 181 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 1.3e-57 227.6 265 46.4
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 2.9e-57 226.5 186 62.4
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 1.1e-56 224.6 185 61.6
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 4.2e-56 222.6 168 67.3
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 7.9e-55 218.4 168 66.1
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 5.1e-54 215.7 179 60.3
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 1.8e-51 207.2 191 58.1
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 6.9e-51 205.3 267 43.8
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 1.2e-50 204.5 209 54.1
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 8.4e-49 198.4 261 41.0
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 4.6e-47 192.6 192 53.6
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 1.2e-42 177.9 204 51.5
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 5.3e-35 152.5 122 60.7
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 4.5e-34 149.4 82 84.1
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 1.1e-32 144.8 305 32.8
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 3.2e-32 143.3 86 75.6
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.6e-31 139.8 82 80.5
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 6.1e-31 139.0 243 34.2
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 7.9e-31 138.7 483 26.3
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 2.3e-30 137.1 82 75.6
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 2.0e-29 134.0 109 65.1
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 2.6e-29 133.7 119 57.1
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.2e-28 130.6 94 64.9
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.2e-28 130.6 121 53.7
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 2.8e-28 130.2 345 26.7
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 6.3e-28 129.0 93 64.5
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 3.4e-26 123.2 82 70.7
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.5e-24 117.1 135 48.1
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 3.9e-22 109.8 111 49.5
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.2e-22 109.4 151 45.0
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 1.4e-19 101.3 60 75.0
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 7.7e-18 95.5 50 88.0
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 8.5e-17 92.0 106 52.8
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 8.8e-14 82.0 57 63.2
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 9.7e-13 78.6 51 70.6
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 6.3e-12 75.9 55 67.3
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 7.0e-11 72.4 53 66.0
CSS0047531 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D112748 9.4e-08 62.0 53 60.4


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