Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 4.7e-269 930.6 476 100.0
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 4.2e-209 731.5 476 78.2
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 5.7e-206 721.1 476 77.3
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 5.7e-206 721.1 476 77.3
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 9.6e-206 720.3 476 78.4
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 1.4e-204 716.5 476 76.9
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 4.1e-204 714.9 476 77.1
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.2e-203 713.4 476 76.9
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 2.9e-202 708.8 476 77.1
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 6.5e-202 707.6 476 75.8
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.2e-200 703.4 476 76.5
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 7.9e-200 700.7 476 75.0
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 1.3e-199 699.9 476 75.4
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 5.1e-199 698.0 476 75.8
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 6.7e-199 697.6 476 77.5
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 1.5e-198 696.4 476 75.4
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 1.5e-198 696.4 476 75.2
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 7.4e-198 694.1 515 70.7
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 1.6e-197 693.0 476 75.6
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 2.2e-197 692.6 476 74.6
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 2.8e-197 692.2 477 75.5
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 3.7e-197 691.8 476 75.4
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 3.7e-197 691.8 476 75.4
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 4.8e-197 691.4 476 75.4
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 4.8e-197 691.4 476 75.2
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 6.3e-197 691.0 476 75.2
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 1.1e-196 690.3 403 85.1
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 6.9e-196 687.6 476 73.5
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 3.4e-195 685.3 476 73.9
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 4.5e-195 684.9 403 84.1
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 7.7e-195 684.1 476 73.5
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 8.5e-194 680.6 476 74.6
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 1.1e-193 680.2 476 74.4
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 1.1e-193 680.2 477 75.9
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 2.5e-193 679.1 403 83.9
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 3.2e-193 678.7 471 74.7
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 3.2e-193 678.7 477 74.4
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 5.5e-193 677.9 541 68.4
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 9.4e-193 677.2 476 73.5
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 1.2e-192 676.8 476 72.1
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 1.6e-192 676.4 475 72.6
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 2.1e-192 676.0 476 73.7
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 1.8e-191 672.9 476 73.5
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 1.8e-191 672.9 476 73.3
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 6.7e-191 671.0 457 75.1
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 2.0e-190 669.5 476 73.1
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 3.3e-190 668.7 476 72.9
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 7.4e-190 667.5 476 72.3
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 6.3e-189 664.5 504 70.4
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 1.1e-188 663.7 476 71.4
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 1.4e-188 663.3 385 84.7
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 3.1e-188 662.1 457 74.6
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 6.9e-188 661.0 476 71.8
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 6.9e-188 661.0 476 71.8
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 6.9e-188 661.0 457 74.4
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 1.2e-187 660.2 476 73.7
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.2e-187 660.2 457 74.4
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.2e-187 660.2 457 74.4
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 3.4e-187 658.7 403 80.1
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 5.9e-187 657.9 383 84.1
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.0e-186 657.1 437 78.3
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.3e-186 656.8 476 73.1
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 1.9e-185 652.9 403 81.1
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.9e-185 652.9 558 64.7
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 4.7e-184 648.3 476 71.6
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 5.1e-183 644.8 476 70.2
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 3.3e-182 642.1 476 71.6
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 9.7e-182 640.6 437 76.2
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 4.1e-180 635.2 385 81.3
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 5.3e-180 634.8 403 77.7
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 3.5e-179 632.1 383 81.7
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 1.3e-178 630.2 457 70.9
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 2.7e-176 622.5 476 68.3
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 3.6e-176 622.1 485 67.4
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 1.4e-175 620.2 526 65.2
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 5.7e-174 614.8 476 67.0
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 1.3e-173 613.6 476 69.7
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 2.8e-173 612.5 477 65.6
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 2.4e-172 609.4 476 66.4
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 5.3e-172 608.2 470 68.3
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 1.3e-170 603.6 476 64.9
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 6.5e-170 601.3 470 67.4
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 1.9e-169 599.7 470 67.2
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 9.4e-169 597.4 470 66.6
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 1.6e-168 596.7 470 66.4
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 1.6e-168 596.7 397 75.3
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 1.6e-168 596.7 470 66.6
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 1.8e-167 593.2 471 66.5
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 1.8e-167 593.2 471 66.5
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 2.3e-167 592.8 471 66.5
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.3e-167 592.8 470 66.4
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 8.8e-167 590.9 403 74.2
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 1.7e-165 586.6 470 64.9
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 1.5e-158 563.5 418 70.6
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 3.9e-146 522.3 426 66.4
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 5.0e-146 521.9 383 73.1
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 1.9e-137 493.4 477 55.6
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 3.4e-134 482.6 477 54.7
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 1.9e-132 476.9 476 54.0
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 1.3e-130 470.7 482 53.1
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 3.3e-129 466.1 331 74.6
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 2.1e-123 446.8 471 50.5
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 7.8e-123 444.9 393 61.3
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 1.2e-99 367.9 385 56.9
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 1.2e-86 324.7 226 65.5
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 6.9e-79 298.9 211 69.7
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 1.8e-74 284.3 252 65.5
Oeu032270.1 Olea europaea HOM05D005803 ORTHO05D008090 1.1e-68 265.0 144 89.6
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 6.3e-64 249.2 410 37.3
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 1.0e-58 231.9 244 57.4
Hma1.2p1_2251F.1_g318140 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 3.0e-58 230.3 130 85.4
SEGI_31260 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 5.2e-58 229.6 180 60.6
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 5.0e-53 213.0 129 76.0
TPR.G29241 Trifolium pratense HOM05D005803 ORTHO05D008090 6.1e-35 152.9 91 74.7
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 4.4e-33 146.7 180 48.3
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 2.9e-32 144.1 157 53.5
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 2.9e-32 144.1 157 53.5
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 1.8e-31 141.4 178 47.2
Hma1.2p1_0055F.1_g031500 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.8e-31 141.4 90 76.7
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 3.3e-28 130.6 167 47.9
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 8.3e-24 115.9 68 79.4
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 3.2e-23 114.0 77 70.1
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 1.3e-21 108.6 58 91.4
Atru.chr4.2782 Acer truncatum HOM05D005803 ORTHO05D008090 1.5e-17 95.1 87 58.6
Hma1.2p1_1012F.1_g247600 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 3.4e-17 94.0 90 57.8
AagrBONN_evm.TU.Sc2ySwM_368.1566 Anthoceros agrestis HOM05D004454 ORTHO05D005462 5.8e-09 66.6 162 23.5
Lsat_1_v5_gn_5_17960 Lactuca sativa HOM05D004454 ORTHO05D005462 1.1e-07 62.4 172 23.3
Medtr1g103750 Medicago truncatula HOM05D004454 ORTHO05D005462 1.9e-07 61.6 160 24.4
ECA246G3380 Erigeron canadensis HOM05D004454 ORTHO05D005462 3.5e-06 57.4 162 23.5
HanXRQChr05g0155441 Helianthus annuus HOM05D004454 ORTHO05D005462 3.5e-06 57.4 161 22.4
Peaxi162Scf00017g02211 Petunia axillaris HOM05D004454 ORTHO05D005462 3.5e-06 57.4 160 21.9


User provided reference genes

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