Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 1.9e-156 555.8 285 100.0
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 8.8e-37 158.3 213 46.5
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 3.7e-27 126.3 198 37.9
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.3e-24 117.9 208 36.5
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 4.7e-22 109.4 205 36.6
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 1.4e-21 107.8 199 36.2
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 8.8e-21 105.1 207 40.6
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 3.7e-19 99.8 192 39.6
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 8.2e-19 98.6 221 38.0
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.1e-18 98.2 189 36.0
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 1.1e-18 98.2 184 37.5
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 9.1e-18 95.1 197 36.5
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 1.6e-17 94.4 149 38.3
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 2.6e-17 93.6 230 35.2
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.6e-17 93.6 206 34.0
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 7.2e-15 85.5 185 36.8
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 2.1e-14 84.0 135 40.7
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 2.7e-14 83.6 198 37.4
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 6.1e-14 82.4 204 35.3
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 4.4e-12 76.3 192 34.9
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 2.4e-10 70.5 203 32.0
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 7.0e-10 68.9 143 35.7
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 2.0e-09 67.4 147 36.7
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 2.7e-09 67.0 194 32.5
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 4.5e-09 66.2 143 34.3
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 7.7e-09 65.5 185 33.0
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 1.7e-08 64.3 186 34.4
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 2.2e-08 63.9 175 31.4
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.5e-07 61.2 191 31.4
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 2.5e-07 60.5 152 33.6
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 2.5e-07 60.5 160 35.6
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 7.2e-07 58.9 180 32.8
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 6.1e-06 55.8 198 26.8


User provided reference genes

Program Settings