Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 0.0e+00 1345.5 729 100.0
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 3.2e-176 622.9 744 55.0
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 1.3e-164 584.3 740 52.2
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 1.2e-130 471.5 767 45.4
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 7.7e-130 468.8 770 45.6
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.0e-129 468.4 776 45.6
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 3.3e-128 463.4 778 46.1
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 5.2e-126 456.1 780 45.8
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 7.5e-125 452.2 728 45.6
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 5.6e-120 436.0 781 43.4
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 7.3e-120 435.6 600 49.7
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 1.4e-118 431.4 756 42.5
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 2.3e-118 430.6 797 43.2
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 2.6e-117 427.2 766 43.9
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 7.8e-114 415.6 810 42.0
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 1.6e-111 407.9 687 44.7
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 2.8e-111 407.1 787 40.7
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 4.7e-111 406.4 417 61.2
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 2.3e-110 404.1 806 42.4
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.2e-110 402.9 732 43.4
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 2.0e-109 401.0 772 41.5
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 4.4e-109 399.8 601 47.9
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.7e-108 396.7 746 43.3
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.7e-108 396.7 731 43.1
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 6.4e-108 396.0 756 41.9
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 1.1e-107 395.2 730 43.6
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.4e-107 394.8 773 43.9
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 3.5e-106 390.2 806 40.0
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 3.5e-106 390.2 775 42.8
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.3e-105 388.3 824 38.5
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 6.6e-105 386.0 794 40.1
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 7.3e-104 382.5 818 39.1
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.1e-103 380.9 740 41.9
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 8.1e-103 379.0 735 40.3
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.6e-101 374.0 826 38.5
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.2e-100 370.9 716 42.2
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 8.4e-100 369.0 780 38.8
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 1.1e-99 368.6 727 40.4
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 1.1e-99 368.6 457 52.5
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 4.1e-99 366.7 778 40.1
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 5.4e-99 366.3 731 39.8
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 6.0e-98 362.8 612 43.5
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 1.3e-97 361.7 771 40.6
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 3.0e-97 360.5 785 40.3
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 5.1e-97 359.8 782 38.2
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 5.6e-96 356.3 732 40.2
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 9.6e-96 355.5 773 39.3
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 2.1e-95 354.4 629 43.4
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 6.2e-95 352.8 804 37.7
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 4.0e-94 350.1 404 55.7
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 2.0e-93 347.8 779 37.9
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 3.4e-93 347.1 636 42.5
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 9.9e-93 345.5 794 37.3
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.1e-91 342.0 570 43.9
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 2.4e-91 340.9 420 52.4
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 4.2e-91 340.1 538 46.8
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 5.4e-91 339.7 781 38.5
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 9.3e-91 339.0 762 38.5
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 1.2e-90 338.6 796 37.3
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 1.6e-90 338.2 764 37.6
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 7.8e-90 335.9 806 37.3
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 5.1e-89 333.2 721 39.9
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 6.6e-89 332.8 740 39.2
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.5e-88 331.6 711 39.7
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 4.3e-88 330.1 637 41.4
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 7.3e-88 329.3 739 38.6
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 2.8e-87 327.4 766 36.9
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 6.2e-87 326.2 539 44.7
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-85 322.0 745 38.7
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 2.6e-85 320.9 769 37.1
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 2.6e-85 320.9 742 38.1
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 4.4e-85 320.1 770 36.2
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 5.8e-85 319.7 787 37.1
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 7.6e-85 319.3 732 38.5
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 2.2e-84 317.8 743 35.9
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 5.4e-83 313.2 634 41.3
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 1.0e-81 308.9 524 42.2
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.5e-80 304.3 549 42.4
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.3e-80 303.9 739 36.9
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 1.6e-79 301.6 749 37.1
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 2.8e-79 300.8 675 39.4
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 3.6e-79 300.4 744 36.4
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 1.1e-78 298.9 500 45.4
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 5.3e-78 296.6 798 35.8
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 9.0e-78 295.8 538 41.8
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.5e-77 295.0 892 34.0
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 4.5e-77 293.5 756 36.1
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 5.8e-77 293.1 843 35.1
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 9.9e-77 292.4 662 37.2
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.3e-76 292.0 856 34.0
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 1.7e-76 291.6 719 36.7
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 2.2e-76 291.2 454 45.2
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 3.8e-76 290.4 780 35.5
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 6.4e-76 289.7 747 36.1
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.9e-75 288.1 413 46.7
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 2.4e-75 287.7 772 36.1
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 2.1e-74 284.6 735 34.8
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 2.1e-74 284.6 473 45.0
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 2.7e-74 284.3 552 39.9
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.7e-74 284.3 770 36.5
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 6.0e-74 283.1 724 38.4
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 1.8e-73 281.6 826 34.6
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 1.1e-72 278.9 550 39.3
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 4.3e-72 276.9 537 41.9
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 9.6e-72 275.8 780 35.0
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 2.8e-71 274.2 762 34.0
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 1.8e-70 271.6 828 34.2
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 3.1e-70 270.8 769 33.7
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 6.9e-70 269.6 727 33.3
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 6.9e-70 269.6 737 34.7
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 5.8e-69 266.5 831 33.3
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.7e-68 265.0 767 34.2
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 8.4e-68 262.7 546 38.3
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 1.4e-67 261.9 809 33.9
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 2.5e-67 261.2 550 38.0
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 1.6e-66 258.5 728 33.5
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 2.7e-66 257.7 725 33.1
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 3.5e-66 257.3 637 37.7
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 1.3e-65 255.4 271 57.9
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 4.3e-64 250.4 783 34.6
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 5.7e-64 250.0 738 33.1
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 6.3e-63 246.5 647 36.9
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 1.2e-61 242.3 741 32.7
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 2.0e-61 241.5 715 34.5
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 2.9e-60 237.7 507 38.9
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 2.9e-60 237.7 771 33.7
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 1.9e-59 235.0 511 38.9
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 5.5e-59 233.4 609 34.6
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.2e-58 232.3 595 36.0
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 2.7e-58 231.1 775 32.1
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 3.6e-58 230.7 747 33.6
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 2.8e-55 221.1 808 33.2
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 1.5e-53 215.3 573 34.7
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.4e-49 202.2 358 40.5
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 3.7e-47 194.1 640 32.5
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.0e-44 186.0 719 31.3
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 1.3e-44 185.7 381 40.4
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 1.1e-43 182.6 800 29.4
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.6e-37 162.2 392 35.5
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.0e-37 161.8 370 35.7
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 9.4e-35 152.9 232 48.3
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 6.1e-34 150.2 143 59.4
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 1.2e-32 146.0 390 34.4
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 1.8e-30 138.7 158 53.2
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 1.3e-28 132.5 375 32.8
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 1.3e-28 132.5 100 70.0
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 3.0e-25 121.3 332 34.0
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 1.4e-22 112.5 117 52.1
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 2.4e-22 111.7 84 71.4
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 4.1e-22 110.9 352 31.0
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.0e-20 106.3 362 32.6
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.2e-19 101.3 167 41.3
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.6e-18 99.0 75 72.0
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.4e-17 95.9 62 80.6
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 3.0e-17 94.7 62 80.6
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.2e-17 94.0 68 72.1
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 6.8e-17 93.6 63 77.8
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 2.6e-16 91.7 143 41.3
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.8e-15 88.2 66 68.2
Gohir.D06G132966 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.7e-15 87.8 55 83.6
Gorai.010G154900 Gossypium raimondii HOM05D003628 ORTHO05D004253 3.7e-15 87.8 56 82.1
Gohir.D08G229150 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.9e-15 87.4 56 82.1
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.1e-14 84.7 56 78.6
Gohir.D02G158575 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.1e-14 84.3 56 78.6
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 3.5e-13 81.3 504 26.4
Ah.14g082010 Amaranthus hybridus HOM05D003628 ORTHO05D004253 1.1e-11 76.3 60 71.7
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-10 72.8 50 70.0
Gohir.D11G243366 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-10 72.8 63 66.7
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.6e-10 72.4 50 70.0
SHI00869 Sapria himalayana HOM05D003628 ORTHO05D004253 5.2e-09 67.4 75 50.7
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 1.2e-08 66.2 47 70.2
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 9.8e-08 63.2 63 60.3
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 1.7e-07 62.4 459 25.7
Gohir.D01G060866 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.3e-07 60.1 39 74.4
Gohir.A11G239380 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.4e-06 58.5 39 71.8
Cre12.g514550 Chlamydomonas reinhardtii HOM05D003628 ORTHO05D004253 3.2e-06 58.2 95 37.9
Gohir.D08G175500 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.0e-06 57.0 39 69.2
Gorai.009G342200 Gossypium raimondii HOM05D003628 ORTHO05D016264 9.2e-06 56.6 37 73.0


User provided reference genes

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