Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 9.2e-242 839.7 403 100.0
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 3.7e-150 535.4 402 66.9
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 7.8e-148 527.7 403 67.2
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 5.6e-130 468.4 401 60.8
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 7.8e-124 448.0 397 56.9
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 3.9e-123 445.7 397 56.7
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 5.1e-123 445.3 397 56.7
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 1.2e-121 440.7 405 58.5
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 3.6e-121 439.1 396 57.1
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 8.9e-120 434.5 402 56.2
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.5e-119 433.7 397 56.2
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 3.4e-119 432.6 394 58.9
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 1.7e-118 430.3 397 56.9
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.8e-118 429.1 400 56.5
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 2.4e-117 426.4 393 56.2
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 9.3e-117 424.5 394 54.6
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 9.3e-117 424.5 400 57.0
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 2.7e-116 422.9 394 54.8
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 3.5e-116 422.5 401 54.6
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 6.0e-116 421.8 396 55.1
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 6.0e-116 421.8 400 53.8
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.3e-115 420.6 392 55.1
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.3e-115 419.9 395 55.9
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 1.1e-114 417.5 395 55.7
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 1.5e-114 417.2 393 55.0
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.5e-114 416.4 395 55.2
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.5e-114 416.4 388 56.4
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 1.3e-113 414.1 398 54.5
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 2.1e-113 413.3 397 54.4
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 2.1e-113 413.3 383 57.4
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 2.8e-113 412.9 383 56.4
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 4.8e-113 412.1 394 55.1
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 6.2e-113 411.8 403 54.6
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 1.1e-112 411.0 395 54.4
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 5.3e-112 408.7 395 54.9
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 5.3e-112 408.7 394 55.6
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.5e-111 407.1 394 55.3
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 4.5e-111 405.6 395 52.7
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 4.5e-111 405.6 395 52.7
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 1.7e-110 403.7 399 52.1
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 2.9e-110 402.9 398 52.5
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 8.4e-110 401.4 398 52.3
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 1.1e-109 401.0 394 55.3
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.4e-109 400.6 402 54.0
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.9e-109 400.2 376 55.1
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 5.4e-109 398.7 428 52.6
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 7.1e-109 398.3 398 51.8
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 7.1e-109 398.3 397 54.2
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 1.2e-108 397.5 395 51.4
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 2.7e-108 396.4 398 55.0
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 7.9e-108 394.8 348 56.9
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 2.3e-107 393.3 394 53.0
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 3.0e-107 392.9 397 52.9
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 8.7e-107 391.3 414 51.4
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 8.7e-107 391.3 440 48.9
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 1.9e-106 390.2 395 53.7
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 3.3e-106 389.4 396 52.8
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 5.6e-106 388.7 404 51.2
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 5.6e-106 388.7 394 51.8
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 5.6e-106 388.7 405 50.9
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 7.4e-106 388.3 446 48.0
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 7.4e-106 388.3 395 52.7
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 1.3e-105 387.5 394 51.3
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 1.6e-105 387.1 404 51.2
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 2.1e-105 386.7 405 50.6
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 4.8e-105 385.6 405 51.1
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 6.2e-105 385.2 396 50.3
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.1e-104 384.4 346 56.9
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 6.9e-104 381.7 363 54.5
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 6.9e-104 381.7 398 51.3
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-103 380.6 394 51.8
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 4.5e-103 379.0 399 50.9
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 2.9e-102 376.3 417 51.1
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 3.8e-102 375.9 394 51.3
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 6.7e-99 365.2 400 51.0
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 2.5e-98 363.2 376 51.1
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 4.3e-98 362.5 397 51.4
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.3e-98 362.5 417 48.2
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 5.3e-96 355.5 375 52.8
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 1.5e-95 354.0 405 48.9
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 7.9e-92 341.7 409 46.5
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 3.7e-89 332.8 398 46.2
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 1.1e-85 321.2 296 53.4
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 6.7e-83 312.0 470 39.6
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 1.7e-81 307.4 335 49.0
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 2.2e-81 307.0 400 44.0
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 1.2e-79 301.2 328 48.2
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 1.4e-77 294.3 237 62.4
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 3.2e-77 293.1 335 49.6
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 1.4e-75 287.7 344 46.5
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 7.4e-74 282.0 322 48.4
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 6.3e-73 278.9 287 53.0
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 2.6e-71 273.5 393 41.0
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 3.4e-71 273.1 392 40.3
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.7e-70 270.8 264 56.4
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 3.2e-69 266.5 406 40.4
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 8.8e-59 231.9 154 66.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 2.8e-57 226.9 301 42.2
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 3.2e-53 213.4 371 36.1
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 1.2e-52 211.5 286 42.7
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.6e-52 211.1 127 75.6
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 3.6e-52 209.9 141 68.8
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 1.2e-50 204.9 287 43.2
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 2.2e-49 200.7 124 75.8
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 5.0e-46 189.5 150 58.0
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 3.4e-42 176.8 293 39.2
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 8.3e-41 172.2 279 39.1
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 1.4e-40 171.4 132 59.1
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 1.8e-40 171.0 193 46.1
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 3.5e-39 166.8 101 70.3
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 1.7e-38 164.5 117 64.1
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 4.0e-35 153.3 152 53.3
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 4.4e-34 149.8 93 73.1
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 1.3e-33 148.3 233 39.5
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 4.6e-31 139.8 246 37.8
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 6.6e-30 136.0 83 75.9
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 4.6e-23 113.2 84 56.0
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 6.0e-23 112.8 116 51.7
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 3.6e-20 103.6 202 34.7
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-18 98.2 76 59.2
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 1.4e-16 91.7 101 43.6
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 1.4e-16 91.7 101 43.6
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 6.0e-15 86.3 56 66.1
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 1.0e-14 85.5 59 61.0
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 1.5e-13 81.6 50 70.0
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.5e-13 81.6 89 46.1
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 2.1e-12 77.8 48 68.8
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 8.1e-12 75.9 84 52.4
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 6.8e-11 72.8 48 62.5
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 6.6e-06 56.2 72 47.2


User provided reference genes

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