Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 7.1e-226 786.9 403 100.0
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 5.8e-95 352.1 279 66.7
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 4.8e-89 332.4 274 65.3
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 6.3e-81 305.4 285 57.5
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 3.2e-77 293.1 229 62.0
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-76 291.2 275 56.0
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.6e-76 290.8 273 56.4
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.1e-76 290.4 273 56.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 2.1e-76 290.4 214 67.3
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 5.1e-75 285.8 267 58.1
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 2.6e-74 283.5 265 59.2
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 2.6e-74 283.5 271 55.4
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 4.4e-74 282.7 234 62.4
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 5.7e-74 282.3 254 58.3
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.2e-73 280.4 274 56.2
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.1e-72 278.1 225 60.4
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 2.4e-72 276.9 281 54.1
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 2.4e-72 276.9 280 54.3
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 1.2e-71 274.6 262 58.0
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 5.9e-71 272.3 274 55.5
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.0e-70 271.6 237 61.2
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.7e-70 270.8 215 61.4
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 2.9e-70 270.0 234 60.7
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 2.9e-70 270.0 277 54.5
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 3.8e-70 269.6 280 52.9
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 5.5e-69 265.8 188 67.0
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.2e-68 264.6 239 58.2
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 4.7e-68 262.7 222 59.0
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 6.1e-68 262.3 196 62.2
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.4e-67 261.2 279 52.7
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 2.3e-67 260.4 276 51.1
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 2.3e-67 260.4 277 52.0
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 2.3e-67 260.4 275 51.3
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 2.3e-67 260.4 252 53.6
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 5.2e-67 259.2 276 50.4
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 6.7e-67 258.8 283 50.9
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 6.7e-67 258.8 195 63.1
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 6.7e-67 258.8 243 56.0
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 6.7e-67 258.8 270 53.7
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.0e-66 257.3 265 56.2
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 2.0e-66 257.3 235 58.3
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 5.7e-66 255.8 274 50.0
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 5.7e-66 255.8 265 55.8
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 7.4e-66 255.4 265 56.2
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.7e-65 254.2 309 49.2
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.2e-65 253.8 275 50.5
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 4.8e-65 252.7 252 52.0
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 6.3e-65 252.3 276 50.7
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.8e-64 250.8 274 50.0
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.4e-64 250.4 280 49.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.4e-64 250.4 261 53.3
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 3.1e-64 250.0 243 54.7
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.1e-64 250.0 243 54.7
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 5.3e-64 249.2 249 53.8
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.6e-63 247.7 278 49.3
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.6e-63 246.9 274 52.2
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 5.9e-63 245.7 236 55.5
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.9e-63 245.7 231 55.0
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 5.9e-63 245.7 195 60.5
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 1.0e-62 245.0 194 61.3
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.3e-62 244.6 239 54.8
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.3e-62 244.6 231 55.4
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.7e-62 244.2 269 49.1
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.2e-62 243.8 195 60.0
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 6.5e-62 242.3 259 51.4
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 1.9e-61 240.7 277 48.4
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 3.2e-61 240.0 239 54.4
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 4.2e-61 239.6 264 51.9
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 4.2e-61 239.6 216 56.9
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 4.2e-61 239.6 249 54.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 7.2e-61 238.8 193 61.1
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 7.2e-61 238.8 199 57.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 9.4e-61 238.4 236 53.8
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 2.1e-60 237.3 279 48.0
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 2.1e-60 237.3 243 52.7
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 8.0e-60 235.3 213 57.3
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.0e-59 235.0 253 51.0
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.4e-59 234.6 270 48.9
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 1.8e-59 234.2 263 49.4
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.5e-58 231.1 201 57.7
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.5e-58 231.1 236 51.7
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 2.0e-58 230.7 263 48.7
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.0e-58 230.7 269 48.7
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 2.0e-58 230.7 263 48.7
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 2.0e-58 230.7 263 48.7
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 3.3e-58 229.9 269 48.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 4.4e-58 229.6 201 57.7
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 4.4e-58 229.6 250 50.8
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 5.7e-58 229.2 270 49.6
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 5.7e-58 229.2 232 52.6
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 4.8e-57 226.1 209 56.5
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.1e-56 224.9 218 55.0
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 2.5e-53 213.8 266 46.6
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.4e-51 208.0 254 47.6
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 4.0e-51 206.5 236 47.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 6.8e-51 205.7 236 47.5
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 9.8e-50 201.8 267 45.7
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 9.8e-50 201.8 224 48.2
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 8.6e-46 188.7 193 53.4
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.8e-43 181.0 209 48.8
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 9.8e-42 175.3 172 57.0
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 7.0e-40 169.1 175 53.1
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.0e-38 165.2 150 54.0
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 5.4e-32 142.9 200 39.5
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.6e-31 141.4 190 45.8
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.6e-28 131.3 287 33.4
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 2.1e-20 104.4 191 37.7
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 8.1e-20 102.4 183 34.4
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.5e-18 98.2 190 32.6
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.2e-15 88.6 75 54.7
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 7.8e-15 85.9 179 31.8
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.5e-13 80.9 226 31.0
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 7.3e-13 79.3 63 58.7
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.8e-12 77.4 64 53.1
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 5.2e-11 73.2 69 56.5
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 1.5e-10 71.6 69 55.1


User provided reference genes

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