Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold578G53028 Striga asiatica HOM05D001380 ORTHO05D001912 2.5e-62 241.9 119 100.0
SGA_v2.0_scaffold52G19269 Striga asiatica HOM05D001380 ORTHO05D001912 1.5e-22 109.8 65 83.1
Oeu034854.1 Olea europaea HOM05D001380 ORTHO05D001912 4.8e-21 104.8 65 78.5
MSTRG.4962 Avicennia marina HOM05D001380 ORTHO05D001912 4.1e-20 101.7 65 75.4
Migut.B01485 Erythranthe guttata HOM05D001380 ORTHO05D001912 2.0e-19 99.4 65 75.4
Dinv43588 Davidia involucrata HOM05D001380 ORTHO05D001912 1.7e-18 96.3 68 69.1
SalBow4G1172 Salvia bowleyana HOM05D001380 ORTHO05D001912 1.7e-18 96.3 65 76.9
Dinv44020 Davidia involucrata HOM05D001380 ORTHO05D001912 2.9e-18 95.5 68 69.1
Oeu024388.1 Olea europaea HOM05D001380 ORTHO05D001912 6.5e-18 94.4 65 70.8
Migut.O00570 Erythranthe guttata HOM05D001380 ORTHO05D001912 8.5e-18 94.0 65 69.2
Actinidia21610 Actinidia chinensis HOM05D001380 ORTHO05D001912 1.4e-17 93.2 68 69.1
DCAR_025023 Daucus carota HOM05D001380 ORTHO05D001912 1.4e-17 93.2 65 66.2
SalBow5G4074 Salvia bowleyana HOM05D001380 ORTHO05D001912 2.7e-16 89.0 65 70.8
vmacro21088 Vaccinium macrocarpon HOM05D001380 ORTHO05D001912 6.1e-16 87.8 68 66.2
Nitab4.5_0004088g0070 Nicotiana tabacum HOM05D001380 ORTHO05D001912 1.0e-15 87.0 65 70.8
Nitab4.5_0005034g0040 Nicotiana tabacum HOM05D001380 ORTHO05D001912 1.0e-15 87.0 65 70.8
Peaxi162Scf00745g00014 Petunia axillaris HOM05D001380 ORTHO05D001912 1.0e-15 87.0 65 70.8
Sopen01g035430 Solanum pennellii HOM05D001380 ORTHO05D001912 1.0e-15 87.0 65 69.2
CAN.G756.15 Capsicum annuum HOM05D001380 ORTHO05D001912 1.4e-15 86.7 65 69.2
PGSC0003DMG400001685 Solanum tuberosum HOM05D001380 ORTHO05D001912 1.8e-15 86.3 65 69.2
unitig_26.g8861 Utricularia gibba HOM05D001380 ORTHO05D001912 6.7e-15 84.3 65 63.1
Solyc01g088570.3 Solanum lycopersicum HOM05D001380 ORTHO05D001912 1.1e-14 83.6 65 66.2
unitig_750.g28404 Utricularia gibba HOM05D001380 ORTHO05D001912 1.1e-14 83.6 65 61.5
TAR353G0004 Trochodendron aralioides HOM05D001380 ORTHO05D001912 2.0e-14 82.8 68 61.8
TAR372G0006 Trochodendron aralioides HOM05D001380 ORTHO05D001912 2.0e-14 82.8 68 61.8
TAR375G0543 Trochodendron aralioides HOM05D001380 ORTHO05D001912 9.7e-14 80.5 68 61.8
DCAR_015779 Daucus carota HOM05D001380 ORTHO05D001912 1.3e-13 80.1 67 61.2
Cc02_g25650 Coffea canephora HOM05D001380 ORTHO05D001912 1.7e-13 79.7 65 66.2
TAR636G0007 Trochodendron aralioides HOM05D001380 ORTHO05D001912 1.7e-13 79.7 68 60.3
CDE08G1217 Ceratophyllum demersum HOM05D001380 ORTHO05D001912 2.4e-12 75.9 67 61.2
HanXRQChr12g0383301 Helianthus annuus HOM05D001380 ORTHO05D001912 3.1e-12 75.5 74 58.1
Aqoxy3G02556 Aquilegia oxysepala HOM05D001380 ORTHO05D001912 6.9e-12 74.3 68 57.4
ECA234G0322 Erigeron canadensis HOM05D001380 ORTHO05D001912 6.9e-12 74.3 68 61.8
Lsat_1_v5_gn_4_38561 Lactuca sativa HOM05D001380 ORTHO05D001912 6.9e-12 74.3 74 55.4
CiPaw.13G021900 Carya illinoinensis HOM05D001380 ORTHO05D001912 9.1e-12 73.9 69 59.4
CiPaw.14G016600 Carya illinoinensis HOM05D001380 ORTHO05D001912 1.5e-11 73.2 69 58.0
CDE08G0390 Ceratophyllum demersum HOM05D001380 ORTHO05D001912 1.5e-11 73.2 67 59.7
Hund27420 Selenicereus undatus HOM05D001380 ORTHO05D001912 1.5e-11 73.2 72 54.2
Nn1g00651 Nelumbo nucifera HOM05D001380 ORTHO05D001912 2.6e-11 72.4 68 61.8
Thhalv10001683m.g Eutrema salsugineum HOM05D001380 ORTHO05D001912 3.4e-11 72.0 68 60.3
Glyma.09G247100 Glycine max HOM05D001380 ORTHO05D001912 3.4e-11 72.0 62 59.7
Glyma.18G245900 Glycine max HOM05D001380 ORTHO05D001912 3.4e-11 72.0 62 59.7
BraA05t19453Z Brassica rapa HOM05D001380 ORTHO05D001912 4.5e-11 71.6 64 60.9
Haze_02904 Corylus avellana HOM05D001380 ORTHO05D001912 4.5e-11 71.6 69 56.5
Phvul.008G051000 Phaseolus vulgaris HOM05D001380 ORTHO05D001912 5.9e-11 71.2 62 58.1
Rhsim01G0144200 Rhododendron simsii HOM05D001380 ORTHO05D001912 5.9e-11 71.2 69 58.0
AT2G44620 Arabidopsis thaliana HOM05D001380 ORTHO05D001912 7.7e-11 70.9 65 63.1
Psat3g101240 Pisum sativum HOM05D001380 ORTHO05D001912 7.7e-11 70.9 62 66.1
Sp4g26710 Schrenkiella parvula HOM05D001380 ORTHO05D001912 7.7e-11 70.9 67 62.7
TPR.G28215 Trifolium pratense HOM05D001380 ORTHO05D001912 1.0e-10 70.5 65 66.2
VMungo1383G1021 Vigna mungo HOM05D001380 ORTHO05D001912 1.3e-10 70.1 62 59.7
GSVIVG01018372001 Vitis vinifera HOM05D001380 ORTHO05D001912 1.3e-10 70.1 65 56.9
BcaB02g08838 Brassica carinata HOM05D001380 ORTHO05D001912 1.7e-10 69.7 68 58.8
MD07G1088600 Malus domestica HOM05D001380 ORTHO05D001912 1.7e-10 69.7 65 60.0
MD02G1225300 Malus domestica HOM05D001380 ORTHO05D001912 2.2e-10 69.3 66 59.1
Oeu037411.1 Olea europaea HOM05D001380 ORTHO05D001912 2.2e-10 69.3 65 56.9
PSO063G6587 Papaver somniferum HOM05D001380 ORTHO05D001912 2.2e-10 69.3 68 58.8
A03p24830 Brassica napus HOM05D001380 ORTHO05D001912 2.9e-10 68.9 62 59.7
BraA03t11690Z Brassica rapa HOM05D001380 ORTHO05D001912 2.9e-10 68.9 62 59.7
THA.LOC104817176 Tarenaya hassleriana HOM05D001380 ORTHO05D001912 2.9e-10 68.9 68 58.8
HPP92_011315 Vanilla planifolia HOM05D001380 ORTHO05D001912 2.9e-10 68.9 71 52.1
BolC4t22188H Brassica oleracea HOM05D001380 ORTHO05D001912 3.8e-10 68.6 68 57.4
Aa31LG1G26170 Aethionema arabicum HOM05D001380 ORTHO05D001912 5.0e-10 68.2 68 57.4
BcaC02g12289 Brassica carinata HOM05D001380 ORTHO05D001912 5.0e-10 68.2 68 57.4
A05p04770 Brassica napus HOM05D001380 ORTHO05D001912 5.0e-10 68.2 68 57.4
C03p29610 Brassica napus HOM05D001380 ORTHO05D001912 5.0e-10 68.2 62 59.7
C04p05580 Brassica napus HOM05D001380 ORTHO05D001912 5.0e-10 68.2 68 57.4
BolC3t15310H Brassica oleracea HOM05D001380 ORTHO05D001912 5.0e-10 68.2 62 59.7
Ah.05g177640 Amaranthus hybridus HOM05D001380 ORTHO05D001912 8.5e-10 67.4 72 55.6
CARHR139840 Cardamine hirsuta HOM05D001380 ORTHO05D001912 8.5e-10 67.4 65 58.5
MBI02_g32969_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 8.5e-10 67.4 64 53.1
MBI03_g02277_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 8.5e-10 67.4 64 53.1
MBI15_g00868_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 8.5e-10 67.4 64 53.1
CANSAT25G0268 Cannabis sativa HOM05D001380 ORTHO05D001912 1.1e-09 67.0 68 52.9
QL04p026136 Quercus lobata HOM05D001380 ORTHO05D001912 1.1e-09 67.0 69 52.2
Carub.0004s2717 Capsella rubella HOM05D001380 ORTHO05D001912 1.4e-09 66.6 65 58.5
Medtr7g080760 Medicago truncatula HOM05D001380 ORTHO05D001912 1.4e-09 66.6 65 58.5
PSO782G0310 Papaver somniferum HOM05D001380 ORTHO05D001912 1.4e-09 66.6 68 55.9
QL04p026751 Quercus lobata HOM05D001380 ORTHO05D001912 1.4e-09 66.6 71 50.7
TWI14G0244 Tripterygium wilfordii HOM05D001380 ORTHO05D001912 1.9e-09 66.2 65 55.4
Cpa.g.sc52.67 Carica papaya HOM05D001380 ORTHO05D001912 2.5e-09 65.9 68 55.9
Ca_08026_v3 Cicer arietinum L. HOM05D001380 ORTHO05D001912 2.5e-09 65.9 65 61.5
Duzib133G1380 Durio zibethinus HOM05D001380 ORTHO05D001912 3.2e-09 65.5 69 53.6
MBI14_g36711_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 3.2e-09 65.5 64 51.6
Sc26g0001770 Simmondsia chinensis HOM05D001380 ORTHO05D001912 4.2e-09 65.1 68 48.5
COL.COLO4_12350 Corchorus olitorius HOM05D001380 ORTHO05D001912 5.5e-09 64.7 65 55.4
Eucgr.E01706 Eucalyptus grandis HOM05D001380 ORTHO05D001912 5.5e-09 64.7 72 48.6
Gohir.A08G056100 Gossypium hirsutum HOM05D001380 ORTHO05D001912 5.5e-09 64.7 64 53.1
MBI14_g46624_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 5.5e-09 64.7 64 51.6
Manes.05G058700 Manihot esculenta HOM05D001380 ORTHO05D001912 5.5e-09 64.7 68 51.5
Ciclev10022877m.g Citrus clementina HOM05D001380 ORTHO05D001912 9.4e-09 63.9 67 56.7
Duzib138G1852 Durio zibethinus HOM05D001380 ORTHO05D001912 9.4e-09 63.9 70 54.3
Gohir.D08G065400 Gossypium hirsutum HOM05D001380 ORTHO05D001912 9.4e-09 63.9 64 51.6
Gorai.004G067700 Gossypium raimondii HOM05D001380 ORTHO05D001912 9.4e-09 63.9 64 51.6
Lalb_Chr03g0040741 Lupinus albus HOM05D001380 ORTHO05D001912 9.4e-09 63.9 63 57.1
Lalb_Chr19g0126301 Lupinus albus HOM05D001380 ORTHO05D001912 9.4e-09 63.9 62 56.5
THA.LOC104802507 Tarenaya hassleriana HOM05D001380 ORTHO05D001912 1.2e-08 63.5 68 57.4
MBI19_g40363_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 1.6e-08 63.2 34 79.4
TWI59G0169 Tripterygium wilfordii HOM05D001380 ORTHO05D001912 1.6e-08 63.2 69 52.2
arahy.Tifrunner.gnm1.ann1.LYA50U Arachis hypogaea HOM05D001380 ORTHO05D001912 2.7e-08 62.4 66 53.0
Potri.002G135600 Populus trichocarpa HOM05D001380 ORTHO05D001912 2.7e-08 62.4 68 54.4
Sabra14G0031900 Salix brachista HOM05D001380 ORTHO05D001912 2.7e-08 62.4 65 53.8
Thecc.01G402700 Theobroma cacao HOM05D001380 ORTHO05D001912 2.7e-08 62.4 68 52.9
arahy.Tifrunner.gnm1.ann1.S1U0T7 Arachis hypogaea HOM05D001380 ORTHO05D001912 3.6e-08 62.0 66 51.5
Gorai.001G222600 Gossypium raimondii HOM05D001380 ORTHO05D001912 3.6e-08 62.0 65 49.2
Lj1g0012093 Lotus japonicus HOM05D001380 ORTHO05D001912 4.7e-08 61.6 64 54.7
Sabra02G0105400 Salix brachista HOM05D001380 ORTHO05D001912 1.0e-07 60.5 68 51.5
Potri.014G044000 Populus trichocarpa HOM05D001380 ORTHO05D001912 1.8e-07 59.7 64 53.1
Prupe.2G115500 Prunus persica HOM05D001380 ORTHO05D001912 1.8e-07 59.7 66 54.5
Atru.chr5.41 Acer truncatum HOM05D001380 ORTHO05D001912 2.3e-07 59.3 75 48.0
Atru.chr5.71 Acer truncatum HOM05D001380 ORTHO05D001912 2.3e-07 59.3 75 48.0
PGR042G1389 Punica granatum HOM05D001380 ORTHO05D001912 2.3e-07 59.3 70 50.0
Sed0020181 Sechium edule HOM05D001380 ORTHO05D001912 2.3e-07 59.3 78 46.2
Duzib268G1163 Durio zibethinus HOM05D001380 ORTHO05D001912 3.0e-07 58.9 71 50.7
FAN01G0176 Fragaria x ananassa HOM05D001380 ORTHO05D001912 3.0e-07 58.9 66 57.6
FAN03G2771 Fragaria x ananassa HOM05D001380 ORTHO05D001912 3.0e-07 58.9 66 56.1
FvH4_7g08760 Fragaria vesca HOM05D001380 ORTHO05D001912 3.9e-07 58.5 66 56.1
FAN06G1502 Fragaria x ananassa HOM05D001380 ORTHO05D001912 3.9e-07 58.5 66 56.1
FAN10G0378 Fragaria x ananassa HOM05D001380 ORTHO05D001912 3.9e-07 58.5 66 56.1
FAN10G3503 Fragaria x ananassa HOM05D001380 ORTHO05D001912 3.9e-07 58.5 66 56.1
RcHm_v2.0_Chr1g0344041 Rosa chinensis HOM05D001380 ORTHO05D001912 3.9e-07 58.5 66 54.5
AUR62023365 Chenopodium quinoa HOM05D001380 ORTHO05D001912 8.8e-07 57.4 72 48.6
AUR62013790 Chenopodium quinoa HOM05D001380 ORTHO05D001912 1.5e-06 56.6 72 48.6
MELO3C006265.2 Cucumis melo HOM05D001380 ORTHO05D001912 2.0e-06 56.2 73 46.6
CsaV3_3G010410 Cucumis sativus L. HOM05D001380 ORTHO05D001912 2.0e-06 56.2 71 47.9
EL10Ac1g00713 Beta vulgaris HOM05D001380 ORTHO05D001912 2.6e-06 55.8 70 45.7
MBI14_g24978_MAGBIO Magnolia biondii HOM05D001380 ORTHO05D001912 3.3e-06 55.5 70 48.6
Actinidia05790 Actinidia chinensis HOM05D001380 ORTHO05D001912 5.7e-06 54.7 32 78.1
ClCG05G002860 Citrullus lanatus HOM05D001380 ORTHO05D001912 7.4e-06 54.3 72 45.8
Sed0021535 Sechium edule HOM05D001380 ORTHO05D001912 9.7e-06 53.9 74 47.3


User provided reference genes

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