Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold577G53017 Striga asiatica HOM05D014524 ORTHO05D006541 1.6e-183 646.0 323 100.0
SGA_v2.0_scaffold31G12622 Striga asiatica HOM05D014524 ORTHO05D006541 1.6e-111 406.8 323 70.0
MSTRG.14227 Avicennia marina HOM05D014524 ORTHO05D006541 2.3e-70 270.0 298 57.4
Migut.N00307 Erythranthe guttata HOM05D014524 ORTHO05D006541 5.6e-64 248.8 316 51.3
SalBow8G4971 Salvia bowleyana HOM05D014524 ORTHO05D006541 1.4e-51 207.6 307 49.8
SalBow3G3100 Salvia bowleyana HOM05D014524 ORTHO05D006541 6.2e-47 192.2 297 48.1
Cc03_g06490 Coffea canephora HOM05D008171 ORTHO05D006541 3.0e-41 173.3 274 44.2
SalBow3G0625 Salvia bowleyana HOM05D014524 ORTHO05D006541 1.6e-31 141.0 249 45.4
Actinidia31699 Actinidia chinensis HOM05D008171 ORTHO05D006541 4.2e-27 126.3 273 38.1
TWI09G0902 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 1.8e-22 110.9 327 32.7
Gohir.D11G251100 Gossypium hirsutum HOM05D008171 ORTHO05D006541 1.2e-21 108.2 249 36.5
Gohir.A11G241700 Gossypium hirsutum HOM05D008171 ORTHO05D006541 2.6e-21 107.1 249 36.1
Gorai.007G269300 Gossypium raimondii HOM05D008171 ORTHO05D006541 3.4e-21 106.7 249 36.1
Rhsim07G0050800 Rhododendron simsii HOM05D008171 ORTHO05D006541 1.0e-20 105.1 305 31.1
PGSC0003DMG400000820 Solanum tuberosum HOM05D008171 ORTHO05D006541 1.0e-20 105.1 224 37.1
Dinv29788 Davidia involucrata HOM05D008171 ORTHO05D006541 3.8e-20 103.2 214 40.7
Duzib177G0581 Durio zibethinus HOM05D008171 ORTHO05D006541 4.9e-20 102.8 294 32.0
Glyma.18G253500 Glycine max HOM05D008729 ORTHO05D006541 6.5e-20 102.4 175 42.3
Manes.03G156600 Manihot esculenta HOM05D008171 ORTHO05D006541 8.4e-20 102.1 317 30.3
Dinv43748 Davidia involucrata HOM05D008729 ORTHO05D006541 1.4e-19 101.3 316 34.2
Oeu061870.1 Olea europaea HOM05D008729 ORTHO05D006541 1.4e-19 101.3 117 49.6
TWI09G1485 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 1.9e-19 100.9 342 31.3
ClCG09G011900 Citrullus lanatus HOM05D008171 ORTHO05D006541 5.5e-19 99.4 269 30.9
Cpa.g.sc59.27 Carica papaya HOM05D008171 ORTHO05D006541 2.7e-18 97.1 283 33.2
Atru.chr3.807 Acer truncatum HOM05D008171 ORTHO05D006541 7.9e-18 95.5 285 31.2
Sopen05g005780 Solanum pennellii HOM05D008171 ORTHO05D006541 1.8e-17 94.4 100 50.0
Thecc.04G268400 Theobroma cacao HOM05D008171 ORTHO05D006541 1.1e-16 91.7 275 30.2
Nitab4.5_0009780g0020 Nicotiana tabacum HOM05D008171 ORTHO05D006541 4.3e-16 89.7 112 45.5
Oeu023142.1 Olea europaea HOM05D008171 ORTHO05D006541 4.3e-16 89.7 285 30.9
Potri.004G028100 Populus trichocarpa HOM05D008171 ORTHO05D006541 4.3e-16 89.7 175 34.3
Nitab4.5_0004705g0050 Nicotiana tabacum HOM05D008171 ORTHO05D006541 9.7e-16 88.6 100 47.0
PGR119G2083 Punica granatum HOM05D008729 ORTHO05D006541 1.3e-15 88.2 297 29.3
Rhsim06G0142400 Rhododendron simsii HOM05D008729 ORTHO05D006541 1.4e-14 84.7 178 36.5
COL.COLO4_08914 Corchorus olitorius HOM05D008171 ORTHO05D006541 1.8e-14 84.3 207 37.7
Eucgr.F04204 Eucalyptus grandis HOM05D008729 ORTHO05D006541 6.9e-14 82.4 174 35.1
Prupe.1G051700 Prunus persica HOM05D013250 ORTHO05D006541 9.0e-14 82.0 240 32.5
Cc00_g01630 Coffea canephora HOM05D008729 ORTHO05D006541 2.0e-13 80.9 100 50.0
COL.COLO4_36427 Corchorus olitorius HOM05D008171 ORTHO05D006541 2.0e-13 80.9 229 32.3
Sed0013719 Sechium edule HOM05D008171 ORTHO05D006541 2.0e-13 80.9 263 28.9
FAN12G1247 Fragaria x ananassa HOM05D013250 ORTHO05D006541 3.4e-13 80.1 105 41.9
FAN22G0719 Fragaria x ananassa HOM05D013250 ORTHO05D006541 4.5e-13 79.7 105 41.9
Sabra04G0016000 Salix brachista HOM05D008171 ORTHO05D006541 7.7e-13 79.0 253 30.0
unitig_21.g20743 Utricularia gibba HOM05D050672 ORTHO05D006541 1.0e-12 78.6 263 28.9
Actinidia32333 Actinidia chinensis HOM05D008171 ORTHO05D006541 1.3e-12 78.2 200 33.5
DCAR_002271 Daucus carota HOM05D008729 ORTHO05D006541 1.3e-12 78.2 316 26.6
TPR.G16999 Trifolium pratense HOM05D008729 ORTHO05D006541 2.9e-12 77.0 244 29.5
VMungo1383G3710 Vigna mungo HOM05D008729 ORTHO05D006541 2.9e-12 77.0 296 30.4
Ca_04035_v3 Cicer arietinum L. HOM05D008729 ORTHO05D006541 5.0e-12 76.3 176 34.1
Phvul.008G026200 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 6.5e-12 75.9 152 37.5
Psat3g195600 Pisum sativum HOM05D008729 ORTHO05D006541 6.5e-12 75.9 176 35.8
Sabra18G0128500 Salix brachista HOM05D008171 ORTHO05D006541 6.5e-12 75.9 150 34.7
MD13G1018300 Malus domestica HOM05D008171 ORTHO05D006541 8.5e-12 75.5 134 34.3
Potri.018G147100 Populus trichocarpa HOM05D008729 ORTHO05D006541 8.5e-12 75.5 150 32.7
FvH4_4g05130 Fragaria vesca HOM05D013250 ORTHO05D006541 1.1e-11 75.1 216 31.0
Lalb_Chr03g0040281 Lupinus albus HOM05D008729 ORTHO05D006541 1.4e-11 74.7 284 31.7
Phvul.008G045500 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 1.4e-11 74.7 278 29.9
QL06p021862 Quercus lobata HOM05D008171 ORTHO05D006541 1.9e-11 74.3 266 31.6
Haze_11490 Corylus avellana HOM05D008171 ORTHO05D006541 2.5e-11 73.9 286 30.8
Lj1g0024023 Lotus japonicus HOM05D008729 ORTHO05D006541 2.5e-11 73.9 208 34.1
CiPaw.01G175900 Carya illinoinensis HOM05D008171 ORTHO05D006541 7.2e-11 72.4 86 47.7
Prupe.1G335500 Prunus persica HOM05D008171 ORTHO05D006541 1.6e-10 71.2 106 41.5
Cfa014809 Carpinus fangiana HOM05D008171 ORTHO05D006541 2.7e-10 70.5 255 31.8
CsaV3_3G049130 Cucumis sativus L. HOM05D008171 ORTHO05D006541 3.6e-10 70.1 293 28.7
RcHm_v2.0_Chr4g0396051 Rosa chinensis HOM05D013250 ORTHO05D006541 3.6e-10 70.1 253 28.9
MD16G1230200 Malus domestica HOM05D013250 ORTHO05D006541 4.6e-10 69.7 264 29.2
Hma1.2p1_1240F.1_g269530 Hydrangea macrophylla HOM05D008729 ORTHO05D006541 6.1e-10 69.3 88 51.1
CAN.G184.75 Capsicum annuum HOM05D001868 ORTHO05D009153 1.0e-09 68.6 124 37.9
Medtr4g072710 Medicago truncatula HOM05D008729 ORTHO05D006541 1.8e-09 67.8 202 29.7
Medtr4g072520 Medicago truncatula HOM05D008729 ORTHO05D006541 3.9e-09 66.6 190 29.5
Medtr5g069720 Medicago truncatula HOM05D008729 ORTHO05D006541 3.9e-09 66.6 202 28.2
FvH4_4g33320 Fragaria vesca HOM05D022272 ORTHO05D006541 5.1e-09 66.2 122 37.7
TPR.G6386 Trifolium pratense HOM05D008729 ORTHO05D006541 5.1e-09 66.2 184 29.9
FAN07G2840 Fragaria x ananassa HOM05D004513 ORTHO05D005459 1.1e-08 65.1 147 34.0
COL.COLO4_37412 Corchorus olitorius HOM05D008171 ORTHO05D006541 1.5e-08 64.7 49 61.2
Thecc.05G282200 Theobroma cacao HOM05D008171 ORTHO05D006541 1.9e-08 64.3 81 46.9
A05p13010 Brassica napus HOM05D008171 ORTHO05D006541 2.5e-08 63.9 270 26.3
Medtr4g072430 Medicago truncatula HOM05D008729 ORTHO05D006541 3.3e-08 63.5 208 28.4
Thhalv10016999m.g Eutrema salsugineum HOM05D008171 ORTHO05D006541 4.3e-08 63.2 249 26.5
FAN12G2236 Fragaria x ananassa HOM05D022272 ORTHO05D006541 4.3e-08 63.2 126 35.7
FAN17G0494 Fragaria x ananassa HOM05D022272 ORTHO05D006541 4.3e-08 63.2 149 31.5
C04p17400 Brassica napus HOM05D008171 ORTHO05D006541 5.7e-08 62.8 271 25.1
FAN22G1062 Fragaria x ananassa HOM05D022272 ORTHO05D006541 5.7e-08 62.8 127 35.4
Medtr5g069080 Medicago truncatula HOM05D008729 ORTHO05D006541 9.7e-08 62.0 45 60.0
FAN07G0121 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.3e-07 61.6 123 35.8
DCAR_027373 Daucus carota HOM05D008171 ORTHO05D006541 1.7e-07 61.2 197 29.4
Medtr5g068870 Medicago truncatula HOM05D008729 ORTHO05D006541 1.7e-07 61.2 45 60.0
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 2.2e-07 60.8 251 25.9
BraA05t20241Z Brassica rapa HOM05D008171 ORTHO05D006541 2.2e-07 60.8 300 26.0
Medtr4g052440 Medicago truncatula HOM05D008729 ORTHO05D006541 2.2e-07 60.8 45 57.8
Medtr5g069420 Medicago truncatula HOM05D008729 ORTHO05D006541 2.2e-07 60.8 203 28.6
MELO3C003414.2 Cucumis melo HOM05D008171 ORTHO05D006541 8.2e-07 58.9 90 38.9
RcHm_v2.0_Chr4g0442521 Rosa chinensis HOM05D013250 ORTHO05D006541 1.1e-06 58.5 72 45.8
BcaB02g10481 Brassica carinata HOM05D008171 ORTHO05D006541 1.4e-06 58.2 270 24.8
SalBow3G0463 Salvia bowleyana HOM05D014524 ORTHO05D006541 1.4e-06 58.2 42 61.9
Carub.0004s1355 Capsella rubella HOM05D008171 ORTHO05D006541 3.1e-06 57.0 251 24.3
AL4G27600 Arabidopsis lyrata HOM05D008171 ORTHO05D006541 5.3e-06 56.2 258 27.1
SalBow4G0482 Salvia bowleyana HOM05D014524 ORTHO05D006541 5.3e-06 56.2 89 43.8
arahy.Tifrunner.gnm1.ann1.R8XUDN Arachis hypogaea HOM05D008729 ORTHO05D006541 6.9e-06 55.8 301 25.9
TPR.G30636 Trifolium pratense HOM05D008729 ORTHO05D006541 6.9e-06 55.8 61 45.9


User provided reference genes

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