Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 4.2e-89 331.3 160 100.0
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 8.6e-82 307.0 160 91.2
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 4.2e-81 304.7 160 90.0
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 2.8e-80 302.0 160 90.6
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 4.7e-80 301.2 157 91.1
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 3.0e-79 298.5 160 88.8
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 4.0e-79 298.1 160 89.4
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 2.0e-78 295.8 160 88.8
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 2.6e-78 295.4 160 87.5
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 9.8e-78 293.5 157 89.2
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 6.3e-77 290.8 160 88.1
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 4.1e-76 288.1 160 85.6
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 2.0e-75 285.8 160 86.9
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.3e-74 283.1 149 89.9
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 5.0e-74 281.2 158 86.1
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 6.6e-74 280.8 158 86.1
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 4.3e-73 278.1 160 83.8
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 4.3e-73 278.1 160 83.8
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 2.1e-72 275.8 158 85.4
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 1.0e-71 273.5 157 84.7
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 4.1e-68 261.5 159 81.1
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.2e-67 260.0 160 81.2
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 7.8e-67 257.3 158 79.7
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 3.0e-66 255.4 160 79.4
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 3.0e-66 255.4 160 79.4
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 3.0e-66 255.4 160 79.4
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 8.6e-66 253.8 160 78.8
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 8.6e-66 253.8 160 78.8
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 1.6e-64 249.6 160 77.5
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 5.8e-62 241.1 160 76.2
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 7.5e-62 240.7 160 75.6
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 6.4e-61 237.7 157 77.1
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 1.3e-58 229.9 158 74.1
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 5.2e-55 218.0 142 76.1
Ca_03774_v3 Cicer arietinum L. HOM05D007924 ORTHO05D010328 1.3e-53 213.4 126 83.3
Nitab4.5_0028251g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.2e-51 206.8 145 75.9
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 1.6e-51 206.5 122 79.5
Oeu018666.1 Olea europaea HOM05D007924 ORTHO05D010328 3.3e-49 198.7 107 90.7
Nitab4.5_0000844g0160 Nicotiana tabacum HOM05D007924 ORTHO05D010328 4.7e-48 194.9 128 75.0
SabraMtG0001000 Salix brachista HOM05D007924 ORTHO05D010328 9.9e-46 187.2 119 77.3
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 8.4e-45 184.1 114 78.9
RcHm_v2.0_MTg0499211 Rosa chinensis HOM05D007924 ORTHO05D010328 5.1e-42 174.9 97 85.6
HanXRQChr00c0055g0571411 Helianthus annuus HOM05D007924 ORTHO05D010328 9.6e-41 170.6 88 92.0
HanXRQChr09g0250631 Helianthus annuus HOM05D007924 ORTHO05D010328 4.4e-38 161.8 88 88.6
CsaV3_5G015830 Cucumis sativus L. HOM05D007924 ORTHO05D010328 3.2e-36 155.6 97 77.3
HanXRQChr15g0468771 Helianthus annuus HOM05D007924 ORTHO05D010328 2.3e-34 149.4 89 82.0
Nitab4.5_0003222g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 4.3e-33 145.2 113 64.6
CsaV3_UNG210380 Cucumis sativus L. HOM05D007924 ORTHO05D010328 2.6e-30 136.0 84 78.6
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 9.9e-30 134.0 83 75.9
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 9.9e-30 134.0 83 75.9
Cfa023001 Carpinus fangiana HOM05D007924 ORTHO05D010328 1.3e-29 133.7 74 79.7
arahy.Tifrunner.gnm1.ann1.I8TN6N Arachis hypogaea HOM05D007924 ORTHO05D010328 3.2e-28 129.0 80 75.0
Nitab4.5_0004553g0090 Nicotiana tabacum HOM05D007924 ORTHO05D010328 2.7e-27 125.9 81 74.1
C01p34680 Brassica napus HOM05D007924 ORTHO05D010328 2.3e-26 122.9 83 71.1
Phvul.011G125800 Phaseolus vulgaris HOM05D007924 ORTHO05D010328 3.3e-25 119.0 62 91.9
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 8.4e-21 104.4 72 72.2
BraSC48t46342Z Brassica rapa HOM05D007924 ORTHO05D010328 2.5e-20 102.8 71 70.4
PGSC0003DMG400013141 Solanum tuberosum HOM05D007924 ORTHO05D010328 7.1e-20 101.3 60 80.0
BolSC28t60430H Brassica oleracea HOM05D007924 ORTHO05D010328 1.6e-19 100.1 51 90.2
CsaV3_3G039780 Cucumis sativus L. HOM05D000558 ORTHO05D006060 1.3e-18 97.1 63 77.8
Nitab4.5_0002418g0260 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.1e-18 95.1 58 81.0
Nitab4.5_0002734g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 6.2e-16 88.2 59 71.2
MD02G1208400 Malus domestica HOM05D007924 ORTHO05D010328 4.0e-15 85.5 44 88.6
SHI38118 Sapria himalayana HOM05D007924 ORTHO05D010328 4.5e-14 82.0 49 77.6
SHI34938 Sapria himalayana HOM05D007924 ORTHO05D010328 8.4e-13 77.8 74 59.5
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 9.3e-12 74.3 45 82.2
Potri.011G045912 Populus trichocarpa HOM05D007924 ORTHO05D010328 7.9e-11 71.2 59 59.3
SalBow1G4628 Salvia bowleyana HOM05D005794 ORTHO05D006814 3.7e-08 62.4 31 96.8
Cc00_g19130 Coffea canephora HOM05D007924 ORTHO05D154004 1.5e-06 57.0 98 45.9
Lalb_Chr00c24g0406881 Lupinus albus HOM05D002965 ORTHO05D010536 4.5e-06 55.5 27 88.9
A06p10930 Brassica napus HOM05D007924 ORTHO05D010328 7.7e-06 54.7 42 59.5


User provided reference genes

Program Settings