Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold575G53003 Striga asiatica HOM05D005794 ORTHO05D006814 0.0e+00 1171.4 573 100.0
unitig_87.g28013 Utricularia gibba HOM05D005794 ORTHO05D006814 1.7e-148 530.4 263 98.5
AL5G20240 Arabidopsis lyrata HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
A04p09480 Brassica napus HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
BolSC28t60379H Brassica oleracea HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
BolSC28t60413H Brassica oleracea HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
BraSC48t46249Z Brassica rapa HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
BraSC54t46376Z Brassica rapa HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
CARHR283070 Cardamine hirsuta HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
Sp3g25640 Schrenkiella parvula HOM05D005794 ORTHO05D006814 5.1e-145 518.8 263 96.2
CANSAT16G0022 Cannabis sativa HOM05D005794 ORTHO05D006814 1.1e-144 517.7 263 96.2
Cpa.g.c32646 Carica papaya HOM05D005794 ORTHO05D006814 1.1e-144 517.7 263 96.2
Lj2P1225T95 Lonicera japonica HOM05D005794 ORTHO05D006814 1.5e-144 517.3 263 96.2
DCAR_032446 Daucus carota HOM05D005794 ORTHO05D006814 1.9e-144 516.9 263 96.2
Potri.007G062402 Populus trichocarpa HOM05D005794 ORTHO05D006814 1.9e-144 516.9 263 96.2
Solyc00g500303.1 Solanum lycopersicum HOM05D005794 ORTHO05D006814 1.9e-144 516.9 263 95.8
Sopen00g001030 Solanum pennellii HOM05D005794 ORTHO05D006814 1.9e-144 516.9 263 95.8
AT2G07687 Arabidopsis thaliana HOM05D005794 ORTHO05D006814 2.5e-144 516.5 263 96.2
ATMG00730 Arabidopsis thaliana HOM05D005794 ORTHO05D006814 2.5e-144 516.5 263 96.2
Duzib116G0905 Durio zibethinus HOM05D005794 ORTHO05D006814 4.3e-144 515.8 263 96.6
HanXRQMTg0579171 Helianthus annuus HOM05D005794 ORTHO05D006814 4.3e-144 515.8 263 96.2
Zm00001eb384510 Zea mays HOM05D005794 ORTHO05D006814 9.7e-144 514.6 263 95.4
Zm00001eb437480 Zea mays HOM05D005794 ORTHO05D006814 9.7e-144 514.6 263 95.4
PGR028G0014 Punica granatum HOM05D005794 ORTHO05D006814 1.8e-142 510.4 263 95.8
LjContig00315g0011412 Lotus japonicus HOM05D005794 ORTHO05D006814 2.4e-142 510.0 263 95.8
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 6.9e-142 508.4 264 94.7
Nn1g10154 Nelumbo nucifera HOM05D005794 ORTHO05D006814 9.1e-142 508.1 263 95.4
RcHm_v2.0_Chr6g0257971 Rosa chinensis HOM05D005794 ORTHO05D006814 2.6e-141 506.5 263 95.4
RcHm_v2.0_MTg0498891 Rosa chinensis HOM05D005794 ORTHO05D006814 2.6e-141 506.5 263 95.4
arahy.Tifrunner.gnm1.ann1.KSB3D6 Arachis hypogaea HOM05D005794 ORTHO05D006814 4.5e-141 505.8 275 92.0
Sopen06g006940 Solanum pennellii HOM05D005794 ORTHO05D006814 4.5e-141 505.8 263 94.7
arahy.Tifrunner.gnm1.ann1.Y4WQEL Arachis hypogaea HOM05D005794 ORTHO05D006814 2.2e-140 503.4 275 91.6
Glyma.12G155300 Glycine max HOM05D005794 ORTHO05D006814 1.1e-139 501.1 263 95.1
Lj2P1227T94 Lonicera japonica HOM05D005794 ORTHO05D006814 2.5e-139 500.0 263 93.5
Lalb_Chr00c24g0406721 Lupinus albus HOM05D005794 ORTHO05D006814 2.6e-136 490.0 359 74.1
Hma1.2p1_1338F.1_g276546 Hydrangea macrophylla HOM05D005794 ORTHO05D006814 2.2e-135 486.9 250 96.4
Ca_28561_v3 Cicer arietinum L. HOM05D005794 ORTHO05D006814 6.3e-135 485.3 253 95.3
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 6.3e-135 485.3 250 96.0
arahy.Tifrunner.gnm1.ann1.3CRZ8T Arachis hypogaea HOM05D005794 ORTHO05D006814 2.4e-134 483.4 251 95.6
Actinidia34813 Actinidia chinensis HOM05D005794 ORTHO05D006814 5.3e-134 482.3 243 96.7
Actinidia34939 Actinidia chinensis HOM05D005794 ORTHO05D006814 5.3e-134 482.3 243 96.7
arahy.Tifrunner.gnm1.ann1.R0J8GI Arachis hypogaea HOM05D005794 ORTHO05D006814 1.2e-133 481.1 251 95.2
Gorai.001G162400 Gossypium raimondii HOM05D005794 ORTHO05D006814 3.2e-131 473.0 318 78.9
Thhalv10023004m.g Eutrema salsugineum HOM05D005794 ORTHO05D006814 3.6e-130 469.5 263 88.6
SHI15111 Sapria himalayana HOM05D005794 ORTHO05D006814 3.0e-129 466.5 343 70.8
SabraMtG0005200 Salix brachista HOM05D005794 ORTHO05D006814 8.8e-129 464.9 238 96.2
Sabra04G0097400 Salix brachista HOM05D005794 ORTHO05D006814 2.6e-128 463.4 238 95.8
Lsat_1_v5_gn_8_111680 Lactuca sativa HOM05D005794 ORTHO05D006814 5.7e-128 462.2 263 88.6
Lj3g0000092 Lotus japonicus HOM05D005794 ORTHO05D006814 9.7e-128 461.5 263 89.4
arahy.Tifrunner.gnm1.ann1.TM4QCS Arachis hypogaea HOM05D005794 ORTHO05D006814 8.2e-127 458.4 239 95.4
SEGI_38498 Sequoiadendron giganteum HOM05D005794 ORTHO05D006814 6.5e-124 448.7 260 85.8
Lsat_1_v5_gn_0_2580 Lactuca sativa HOM05D005794 ORTHO05D006814 2.0e-120 437.2 250 88.4
Gorai.013G213200 Gossypium raimondii HOM05D005794 ORTHO05D006814 2.5e-115 420.2 258 82.9
BraSC77t46625Z Brassica rapa HOM05D005794 ORTHO05D006814 5.2e-113 412.5 207 96.6
Zm00001eb434650 Zea mays HOM05D005794 ORTHO05D006814 9.8e-112 408.3 211 95.7
Zm00001eb434760 Zea mays HOM05D005794 ORTHO05D006814 9.8e-112 408.3 211 95.7
Medtr6g032895 Medicago truncatula HOM05D005794 ORTHO05D006814 1.3e-108 397.9 213 93.9
CsaV3_5G015890 Cucumis sativus L. HOM05D005794 ORTHO05D006814 1.5e-107 394.4 266 78.6
Nitab4.5_0008916g0010 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.6e-106 391.0 257 79.4
Ah.10g027990 Amaranthus hybridus HOM05D005794 ORTHO05D006814 5.7e-104 382.5 202 95.0
arahy.Tifrunner.gnm1.ann1.75B77C Arachis hypogaea HOM05D005794 ORTHO05D006814 9.8e-104 381.7 251 79.7
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 1.2e-101 374.8 209 91.4
CsaV3_5G015960 Cucumis sativus L. HOM05D005794 ORTHO05D006814 1.4e-97 361.3 262 73.7
DCAR_029125 Daucus carota HOM05D005794 ORTHO05D006814 2.6e-96 357.1 187 95.2
Nitab4.5_0005637g0070 Nicotiana tabacum HOM05D005794 ORTHO05D006814 6.2e-90 335.9 184 90.2
Lsat_1_v5_gn_5_16240 Lactuca sativa HOM05D005794 ORTHO05D006814 1.5e-83 314.7 161 95.7
CDE02G1904 Ceratophyllum demersum HOM05D005794 ORTHO05D006814 6.0e-77 292.7 156 92.9
Solyc00g019730.1 Solanum lycopersicum HOM05D005794 ORTHO05D006814 1.3e-76 291.6 145 96.6
CAN.G1.2 Capsicum annuum HOM05D005794 ORTHO05D006814 5.1e-76 289.7 148 93.9
Dinv06703 Davidia involucrata HOM05D005794 ORTHO05D006814 7.3e-75 285.8 150 94.7
Ah.10g028710 Amaranthus hybridus HOM05D005794 ORTHO05D006814 2.1e-74 284.3 159 90.6
Lj1g0014382 Lotus japonicus HOM05D005794 ORTHO05D006814 8.1e-74 282.3 249 65.1
ECA039G0030 Erigeron canadensis HOM05D005794 ORTHO05D006814 2.4e-73 280.8 148 94.6
Nitab4.5_0009256g0040 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.6e-69 268.1 195 74.4
CsaV3_5G015820 Cucumis sativus L. HOM05D005794 ORTHO05D006814 6.0e-69 266.2 198 73.2
ATR0012G027 Amborella trichopoda HOM05D005794 ORTHO05D006814 3.0e-68 263.8 213 66.7
Haze_26985 Corylus avellana HOM05D005794 ORTHO05D006814 2.4e-65 254.2 284 47.9
VMungo0720G2970 Vigna mungo HOM05D005794 ORTHO05D006814 1.9e-62 244.6 122 95.9
Nitab4.5_0004553g0080 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.3e-60 238.4 160 77.5
Zm00001eb384560 Zea mays HOM05D005794 ORTHO05D006814 8.7e-60 235.7 119 95.8
Zm00001eb436440 Zea mays HOM05D005794 ORTHO05D006814 1.9e-59 234.6 122 94.3
Sed0025732 Sechium edule HOM05D005794 ORTHO05D006814 9.9e-56 222.2 120 94.2
CAN.G134.170 Capsicum annuum HOM05D005794 ORTHO05D006814 1.9e-54 218.0 108 97.2
Nitab4.5_0003945g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 2.1e-53 214.5 116 88.8
SalBow1G4628 Salvia bowleyana HOM05D005794 ORTHO05D006814 1.1e-51 208.8 101 100.0
Nn1g10038 Nelumbo nucifera HOM05D005794 ORTHO05D006814 3.1e-49 200.7 103 95.1
Medtr0495s0020 Medicago truncatula HOM05D005794 ORTHO05D006814 7.6e-48 196.1 117 87.2
Sed0001254 Sechium edule HOM05D005794 ORTHO05D006814 6.4e-47 193.0 105 91.4
C01p34950 Brassica napus HOM05D005794 ORTHO05D006814 2.1e-45 188.0 101 88.1
Nitab4.5_0004100g0090 Nicotiana tabacum HOM05D009808 ORTHO05D006814 2.1e-45 188.0 165 62.4
SHI20513 Sapria himalayana HOM05D005794 ORTHO05D006814 3.7e-42 177.2 206 48.5
BraSC224t45812Z Brassica rapa HOM05D005794 ORTHO05D006814 4.0e-41 173.7 82 97.6
Nitab4.5_0001788g0090 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.7e-39 168.3 184 53.3
SHI37163 Sapria himalayana HOM05D005794 ORTHO05D006814 5.1e-36 156.8 81 92.6
Cre04.g221700 Chlamydomonas reinhardtii HOM05D005794 ORTHO05D006814 4.3e-35 153.7 259 34.4
Oeu000568.1 Olea europaea HOM05D005794 ORTHO05D006814 5.3e-33 146.7 98 77.6
BraSC177t45751Z Brassica rapa HOM05D005794 ORTHO05D006814 2.0e-32 144.8 84 86.9
Nitab4.5_0000886g0250 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.0e-31 142.5 149 55.7
Nitab4.5_0000172g1250 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.7e-31 141.7 107 70.1
VMungo0720G2880 Vigna mungo HOM05D005794 ORTHO05D006814 2.9e-31 141.0 82 87.8
SHI35300 Sapria himalayana HOM05D005794 ORTHO05D006814 1.0e-28 132.5 80 81.2
SHI48376 Sapria himalayana HOM05D005794 ORTHO05D006814 1.8e-28 131.7 75 85.3
Nitab4.5_0000172g0610 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.1e-25 120.9 79 78.5
SHI44549 Sapria himalayana HOM05D005794 ORTHO05D006814 3.4e-24 117.5 62 88.7
Gohir.D04G096432 Gossypium hirsutum HOM05D005794 ORTHO05D006814 4.5e-24 117.1 101 67.3
SMO310G0001 Selaginella moellendorffii HOM05D005794 ORTHO05D006814 4.5e-24 117.1 154 47.4
Nitab4.5_0003945g0050 Nicotiana tabacum HOM05D018533 ORTHO05D006814 5.5e-22 110.2 68 77.9
Nitab4.5_0002418g0190 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.6e-21 107.5 63 81.0
Psat0s4951g0040 Pisum sativum HOM05D005794 ORTHO05D006814 7.9e-21 106.3 172 43.6
MELO3C018157.2 Cucumis melo HOM05D005794 ORTHO05D006814 5.1e-20 103.6 57 87.7
Nitab4.5_0001152g0840 Nicotiana tabacum HOM05D005794 ORTHO05D006814 5.7e-19 100.1 67 74.6
SHI54766 Sapria himalayana HOM05D005794 ORTHO05D006814 6.3e-18 96.7 48 91.7
Lsat_1_v5_gn_5_16260 Lactuca sativa HOM05D005794 ORTHO05D006814 4.1e-17 94.0 65 73.8
Nitab4.5_0000681g0270 Nicotiana tabacum HOM05D005794 ORTHO05D006814 5.0e-15 87.0 56 80.4
Nitab4.5_0002326g0060 Nicotiana tabacum HOM05D005794 ORTHO05D006814 8.5e-15 86.3 53 84.9
SHI14272 Sapria himalayana HOM05D005794 ORTHO05D006814 8.5e-15 86.3 61 65.6
SHI50742 Sapria himalayana HOM05D005794 ORTHO05D006814 2.7e-13 81.3 39 89.7
SHI14273 Sapria himalayana HOM05D005794 ORTHO05D006814 6.1e-13 80.1 119 43.7
SHI20514 Sapria himalayana HOM05D005794 ORTHO05D006814 6.1e-13 80.1 41 85.4
TPR.G25412 Trifolium pratense HOM05D005794 ORTHO05D006814 1.4e-12 79.0 53 83.0
Solyc03g013460.1 Solanum lycopersicum HOM05D005794 ORTHO05D006814 3.9e-12 77.4 65 58.5
Duzib116G0892 Durio zibethinus HOM05D005794 ORTHO05D006814 5.7e-11 73.6 59 69.5
Oeu030834.3 Olea europaea HOM05D005794 ORTHO05D006814 9.7e-11 72.8 35 91.4
SHI16155 Sapria himalayana HOM05D005794 ORTHO05D006814 9.7e-11 72.8 84 48.8
Nitab4.5_0004100g0120 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.2e-08 65.9 31 90.3
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 2.0e-08 65.1 70 47.1
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 2.6e-08 64.7 33 84.8
Nitab4.5_0002418g0170 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.5e-08 63.9 31 90.3
Aa31csc549G50 Aethionema arabicum HOM05D005794 ORTHO05D006814 5.9e-08 63.5 29 96.6
CSS0006210 Camellia sinensis var. sinensis HOM05D005794 ORTHO05D006814 8.5e-07 59.7 32 84.4
SHI48878 Sapria himalayana HOM05D005794 ORTHO05D006814 8.5e-07 59.7 30 83.3
CSS0015180 Camellia sinensis var. sinensis HOM05D005794 ORTHO05D006814 1.9e-06 58.5 31 83.9
Nitab4.5_0004553g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 4.2e-06 57.4 138 34.1


User provided reference genes

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