Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 0.0e+00 1426.4 748 100.0
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 1.0e-225 787.3 878 56.2
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.5e-221 773.5 796 59.2
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.9e-195 686.8 820 53.3
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 6.7e-169 598.6 829 49.5
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.6e-167 594.0 839 49.8
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 9.6e-160 568.2 861 44.1
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 1.4e-158 564.3 789 47.7
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 9.3e-155 551.6 409 70.7
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 2.8e-151 540.0 842 44.1
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 1.3e-148 531.2 894 42.8
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.9e-148 530.0 940 40.4
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 6.1e-146 522.3 780 45.0
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 7.9e-146 521.9 868 42.2
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 1.8e-145 520.8 825 43.2
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 2.3e-145 520.4 798 44.2
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 1.5e-144 517.7 911 40.7
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 4.8e-143 512.7 822 42.8
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 6.3e-143 512.3 772 45.3
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 6.3e-143 512.3 703 46.9
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 1.8e-142 510.8 678 47.8
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 3.1e-142 510.0 807 42.9
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 4.1e-142 509.6 874 41.5
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 4.1e-142 509.6 931 40.6
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 6.9e-142 508.8 412 64.6
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 5.9e-141 505.8 807 41.9
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 5.0e-140 502.7 860 40.8
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 6.5e-140 502.3 908 42.6
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 8.5e-140 501.9 691 47.2
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.1e-139 501.5 816 42.9
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.9e-139 500.7 405 64.7
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 5.5e-139 499.2 875 42.1
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 9.4e-139 498.4 410 64.4
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 2.7e-138 496.9 668 47.0
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 6.1e-138 495.7 784 44.6
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 6.1e-138 495.7 879 41.8
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 7.9e-138 495.4 946 40.3
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 1.0e-137 495.0 792 42.0
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 3.0e-137 493.4 409 63.3
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 5.1e-137 492.7 786 42.5
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 4.4e-136 489.6 809 42.0
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 5.7e-136 489.2 759 42.7
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 9.7e-136 488.4 755 43.0
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 9.7e-136 488.4 477 57.7
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 3.7e-135 486.5 814 45.6
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 6.3e-135 485.7 801 42.1
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 1.4e-134 484.6 404 64.9
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 3.1e-134 483.4 581 51.6
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 5.3e-134 482.6 803 42.0
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 6.9e-134 482.3 924 39.8
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 6.9e-134 482.3 925 39.8
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.5e-133 481.1 916 39.4
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 2.0e-133 480.7 674 45.5
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 2.6e-133 480.3 488 55.1
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 2.6e-133 480.3 393 64.9
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 1.0e-132 478.4 400 63.2
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.3e-132 478.0 946 39.3
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.2e-132 477.2 812 41.7
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 5.0e-132 476.1 442 58.1
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 1.1e-131 474.9 820 40.2
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 3.2e-131 473.4 677 45.8
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 4.2e-131 473.0 870 40.7
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 4.2e-131 473.0 847 41.0
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 7.9e-130 468.8 778 43.2
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.4e-129 468.0 758 43.4
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 2.3e-129 467.2 405 61.2
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 5.2e-129 466.1 760 42.4
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 1.1e-128 464.9 765 42.7
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 1.1e-128 464.9 751 42.3
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 1.1e-128 464.9 402 61.7
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 1.5e-128 464.5 895 38.4
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 3.3e-128 463.4 771 41.5
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 4.1e-126 456.4 761 42.2
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 5.9e-125 452.6 838 39.6
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 8.5e-124 448.7 758 42.0
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 1.1e-123 448.4 424 59.2
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 4.2e-123 446.4 993 36.4
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 4.2e-123 446.4 394 62.4
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 9.4e-123 445.3 751 42.2
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 2.1e-122 444.1 701 43.1
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 2.1e-122 444.1 740 45.3
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 2.3e-121 440.7 747 41.9
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 3.0e-121 440.3 936 36.6
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 4.0e-121 439.9 414 57.5
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 5.2e-121 439.5 706 42.9
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 2.6e-120 437.2 469 56.9
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 1.7e-119 434.5 861 40.1
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.8e-118 431.0 780 41.0
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 9.1e-118 428.7 445 54.6
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 1.0e-116 425.2 396 58.6
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 2.9e-116 423.7 493 54.2
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 6.5e-116 422.5 739 44.1
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 1.5e-115 421.4 740 44.2
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 2.3e-113 414.1 414 55.8
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 2.0e-112 411.0 394 58.4
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 2.8e-111 407.1 785 39.0
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 4.1e-110 403.3 767 42.5
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 1.4e-105 388.3 784 39.5
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 2.0e-104 384.4 407 53.1
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 7.0e-94 349.4 220 75.0
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 2.5e-91 340.9 298 61.4
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 5.2e-89 333.2 749 39.0
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 2.4e-78 297.7 465 41.7
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 2.8e-66 257.7 299 50.8
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 6.4e-63 246.5 665 33.4
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 1.4e-54 218.8 563 33.9
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 3.3e-35 154.5 209 39.7
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.3e-35 154.1 190 46.3
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 8.8e-28 129.8 89 66.3
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 1.2e-24 119.4 111 56.8
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.4e-16 91.3 80 58.8
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 6.1e-13 80.5 141 41.1
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 5.7e-11 73.9 76 56.6
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 1.1e-06 59.7 82 46.3
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 4.2e-06 57.8 132 31.8


User provided reference genes

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