Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 2.3e-207 725.3 361 100.0
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 3.5e-123 445.7 347 64.3
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.4e-119 433.7 334 64.7
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 3.0e-106 389.4 351 57.8
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 3.0e-106 389.4 335 59.4
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 3.5e-99 365.9 333 55.0
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.2e-94 350.9 335 53.4
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 3.4e-94 349.4 335 51.9
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 8.4e-93 344.7 335 53.1
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.1e-92 344.4 333 50.8
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.4e-92 344.0 333 52.3
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.4e-92 343.2 333 53.2
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 5.4e-92 342.0 331 53.2
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 3.9e-90 335.9 335 53.1
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 5.1e-90 335.5 340 53.5
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 4.3e-89 332.4 315 53.3
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 7.3e-89 331.6 333 50.8
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 7.3e-89 331.6 335 51.0
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.4e-87 327.4 328 49.7
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 1.4e-87 327.4 333 50.5
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 6.9e-87 325.1 335 49.9
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 8.9e-87 324.7 329 49.5
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 1.2e-86 324.3 331 50.5
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 2.6e-86 323.2 333 49.2
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 2.6e-86 323.2 329 50.5
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 1.3e-85 320.9 334 48.8
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.3e-85 320.9 334 48.5
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 1.7e-85 320.5 331 48.0
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 4.9e-85 318.9 329 50.2
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 9.3e-84 314.7 335 49.0
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 4.6e-83 312.4 333 48.0
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.0e-82 311.2 329 51.7
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.7e-82 310.5 325 49.5
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.7e-82 310.5 329 49.5
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 5.1e-82 308.9 333 48.6
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 6.6e-82 308.5 334 48.2
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 6.6e-82 308.5 333 48.6
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 8.7e-82 308.1 334 49.4
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.1e-81 307.8 333 48.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.5e-81 307.4 334 47.9
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.5e-81 306.6 334 47.9
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.3e-81 306.2 334 47.9
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 4.3e-81 305.8 334 47.9
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 4.3e-81 305.8 333 47.4
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 5.6e-81 305.4 318 49.1
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 5.6e-81 305.4 335 49.6
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 2.1e-80 303.5 334 45.5
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.1e-80 303.5 335 44.8
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 4.8e-80 302.4 333 46.2
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 6.2e-80 302.0 333 48.3
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 6.2e-80 302.0 334 46.1
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 8.1e-80 301.6 332 46.4
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 2.4e-79 300.1 336 44.9
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 3.1e-79 299.7 329 47.7
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 2.0e-78 297.0 334 45.5
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.6e-78 296.6 333 45.6
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 3.4e-78 296.2 339 48.4
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 4.5e-78 295.8 329 46.8
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 5.8e-78 295.4 333 46.8
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 6.4e-77 292.0 332 44.6
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 4.2e-76 289.3 336 45.2
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 5.4e-76 288.9 336 44.0
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 7.1e-76 288.5 331 47.4
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 9.3e-76 288.1 329 46.5
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 1.6e-75 287.3 335 43.3
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 1.6e-75 287.3 334 43.7
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 2.7e-75 286.6 329 46.2
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 6.0e-75 285.4 335 43.3
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 6.0e-75 285.4 347 45.0
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 7.9e-75 285.0 335 44.2
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 7.9e-75 285.0 333 43.5
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.0e-74 284.6 335 43.3
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.3e-74 284.3 333 42.9
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 3.0e-74 283.1 330 46.1
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 3.0e-74 283.1 333 42.9
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 5.1e-74 282.3 323 46.4
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 1.5e-73 280.8 329 43.8
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.9e-73 280.4 357 43.7
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.9e-73 280.4 357 43.7
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 4.3e-73 279.3 350 44.3
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 5.6e-73 278.9 338 45.0
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 7.4e-73 278.5 333 43.2
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 2.1e-72 276.9 357 43.1
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 3.6e-72 276.2 330 44.2
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 8.1e-72 275.0 335 44.2
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 1.4e-71 274.2 334 44.6
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 3.4e-70 269.6 337 44.8
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 4.5e-70 269.2 357 42.0
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 4.5e-70 269.2 335 43.0
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 5.8e-70 268.9 343 46.9
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 2.9e-69 266.5 333 41.4
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 2.9e-69 266.5 357 41.7
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 3.8e-69 266.2 336 41.7
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.4e-68 264.2 327 42.5
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 1.4e-68 264.2 336 42.6
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.9e-68 263.8 331 40.8
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 1.6e-67 260.8 332 43.4
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 2.7e-67 260.0 348 39.1
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 4.6e-67 259.2 339 44.0
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 6.0e-67 258.8 264 51.5
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 7.9e-67 258.5 269 48.7
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.8e-66 257.3 339 43.7
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 2.5e-65 253.4 337 40.4
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 2.5e-65 253.4 336 41.4
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 6.2e-64 248.8 276 46.4
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.6e-62 241.9 330 39.7
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 7.1e-60 235.3 250 48.4
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 4.6e-59 232.6 252 48.4
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 6.0e-59 232.3 294 44.6
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.0e-58 231.5 330 38.2
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 3.4e-54 216.5 326 35.9
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 2.3e-50 203.8 180 57.2
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 1.1e-36 158.3 289 34.6
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.6e-33 147.1 255 32.2
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 4.2e-28 129.8 259 30.1
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.4e-26 124.8 201 39.3
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 8.2e-24 115.5 229 29.3
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.1e-20 105.1 337 27.3
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.2e-19 101.7 273 28.9
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 6.1e-19 99.4 367 26.4
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 6.1e-19 99.4 367 26.4
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 9.8e-17 92.0 179 35.2
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 2.2e-16 90.9 271 26.6
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 2.3e-13 80.9 130 40.0
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 3.8e-13 80.1 176 33.5
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 1.4e-10 71.6 369 22.8
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 6.8e-10 69.3 188 28.2
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 9.8e-09 65.5 251 23.9
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 7.8e-06 55.8 234 26.1


User provided reference genes

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