Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 5.1e-63 244.2 119 100.0
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 1.0e-15 87.0 119 40.3
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 7.4e-14 80.9 109 42.2
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 6.3e-13 77.8 119 37.8
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-10 70.1 97 38.1
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 2.2e-10 69.3 107 38.3
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 2.9e-10 68.9 74 48.6
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 6.5e-10 67.8 106 39.6
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 1.9e-09 66.2 75 46.7
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 2.5e-09 65.9 107 38.3
SGA_v2.0_scaffold55G19772 Striga asiatica HOM05D010621 ORTHO05D402089 5.5e-09 64.7 135 37.8
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 9.4e-09 63.9 53 45.3
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 1.2e-08 63.5 117 38.5
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 1.6e-08 63.2 51 47.1
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 1.6e-08 63.2 78 39.7
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-07 59.3 67 38.8
SGA_v2.0_scaffold232G43493 Striga asiatica HOM05D010621 ORTHO05D000126 3.9e-07 58.5 90 35.6
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.7e-07 57.8 56 37.5
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 1.1e-06 57.0 83 39.8
SGA_v2.0_scaffold54G19489 Striga asiatica HOM05D010621 ORTHO05D000126 1.1e-06 57.0 123 32.5
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 1.1e-06 57.0 47 48.9
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.5e-06 56.6 48 50.0
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.5e-06 56.6 48 50.0
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 1.5e-06 56.6 93 35.5
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.6e-06 55.8 55 43.6
SGA_v2.0_scaffold18G08304 Striga asiatica HOM05D010621 ORTHO05D000126 2.6e-06 55.8 64 43.8
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.4e-06 55.1 53 41.5
SGA_v2.0_scaffold161G37849 Striga asiatica HOM05D025911 ORTHO05D000006 4.4e-06 55.1 69 42.0
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 4.4e-06 55.1 133 33.8
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.7e-06 54.7 66 40.9
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 7.4e-06 54.3 55 43.6
SGA_v2.0_scaffold88G27315 Striga asiatica HOM05D016874 ORTHO05D402186 9.7e-06 53.9 106 35.8


User provided reference genes

Program Settings