Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 2.3e-84 315.5 154 100.0
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 5.0e-63 244.6 148 81.1
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 1.1e-62 243.4 146 78.8
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.8e-60 236.1 150 76.0
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 6.8e-60 234.2 150 75.3
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 5.9e-56 221.1 145 73.8
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 2.0e-51 206.1 150 69.3
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 4.0e-44 181.8 146 63.0
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 1.7e-42 176.4 144 64.6
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.7e-42 175.3 143 62.9
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 6.4e-42 174.5 148 58.8
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.1e-41 173.7 141 64.5
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.4e-41 173.3 141 63.1
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 9.2e-41 170.6 143 62.2
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 1.2e-40 170.2 148 57.4
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 3.5e-40 168.7 141 64.5
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 4.6e-40 168.3 148 56.8
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 7.8e-40 167.5 149 57.0
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.0e-39 167.2 154 53.9
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 2.3e-39 166.0 146 58.2
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.0e-39 165.6 142 59.9
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.0e-39 165.6 142 59.9
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 3.9e-39 165.2 144 59.7
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 6.6e-39 164.5 141 59.6
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 6.6e-39 164.5 149 57.7
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 8.6e-39 164.1 138 61.6
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 8.6e-39 164.1 141 61.7
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.1e-38 163.7 140 60.0
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.5e-38 163.3 143 55.9
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 4.3e-38 161.8 142 58.5
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 4.3e-38 161.8 142 58.5
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 5.6e-38 161.4 137 57.7
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 5.6e-38 161.4 143 60.8
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 9.5e-38 160.6 138 58.7
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 9.5e-38 160.6 139 61.2
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 1.6e-37 159.8 140 58.6
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 2.8e-37 159.1 143 55.2
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 3.6e-37 158.7 143 54.5
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 3.6e-37 158.7 136 58.1
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 3.6e-37 158.7 149 51.0
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 4.7e-37 158.3 140 57.9
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 6.2e-37 157.9 150 52.0
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 8.1e-37 157.5 142 56.3
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 3.1e-36 155.6 139 55.4
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 4.0e-36 155.2 146 55.5
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 6.8e-36 154.5 140 56.4
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 6.8e-36 154.5 138 59.4
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 8.9e-36 154.1 140 55.7
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.5e-35 153.3 150 52.7
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.5e-35 153.3 150 52.7
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 2.0e-35 152.9 140 55.7
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 2.0e-35 152.9 149 53.0
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 2.0e-35 152.9 147 57.1
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 2.6e-35 152.5 139 56.8
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 2.6e-35 152.5 139 56.8
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.6e-35 152.5 152 51.3
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.6e-35 152.5 152 51.3
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.6e-35 152.5 152 51.3
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 3.4e-35 152.1 143 55.9
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 5.8e-35 151.4 152 55.9
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 5.8e-35 151.4 138 55.1
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 9.9e-35 150.6 138 55.8
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.3e-34 150.2 141 56.0
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 2.2e-34 149.4 147 56.5
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 2.2e-34 149.4 141 55.3
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 4.9e-34 148.3 137 57.7
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 4.9e-34 148.3 140 55.7
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 4.9e-34 148.3 141 55.3
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 1.1e-33 147.1 138 55.1
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 3.2e-33 145.6 138 54.3
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 4.1e-33 145.2 135 60.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 4.1e-33 145.2 130 56.9
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.4e-33 144.8 146 52.1
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 9.2e-33 144.1 144 52.8
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.6e-32 143.3 140 56.4
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.6e-32 143.3 146 52.1
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.6e-32 143.3 138 56.5
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 2.1e-32 142.9 134 56.7
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.1e-32 142.9 135 55.6
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 3.5e-32 142.1 144 51.4
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 3.0e-31 139.0 191 44.5
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 3.9e-31 138.7 139 52.5
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 8.6e-31 137.5 141 53.2
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.5e-30 136.0 159 47.8
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 7.3e-30 134.4 173 44.5
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 6.2e-29 131.3 73 78.1
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 6.2e-29 131.3 140 45.7
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.8e-28 129.8 176 43.8
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 2.4e-28 129.4 70 81.4
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 4.0e-28 128.6 70 80.0
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 5.2e-28 128.3 132 50.8
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 6.8e-28 127.9 74 75.7
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 8.9e-28 127.5 77 72.7
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.4e-27 125.6 118 55.9
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.8e-27 124.8 118 54.2
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 7.6e-27 124.4 127 52.0
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 2.2e-26 122.9 71 76.1
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 8.4e-26 120.9 71 74.6
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 3.2e-25 119.0 70 72.9
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 9.3e-25 117.5 179 39.7
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.1e-24 116.3 70 70.0
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 7.8e-24 114.4 98 56.1
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 1.3e-23 113.6 182 38.5
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 5.1e-23 111.7 82 62.2
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 5.1e-23 111.7 82 62.2
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 8.7e-23 110.9 139 42.4
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 4.3e-22 108.6 143 39.9
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.3e-21 107.1 70 55.7
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 4.8e-21 105.1 125 43.2
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.8e-20 103.2 104 48.1
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.2e-19 100.5 169 33.1
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 3.8e-18 95.5 190 30.5
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 3.2e-17 92.4 141 37.6
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.3e-15 87.0 51 70.6
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 5.6e-14 81.6 54 61.1
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 9.6e-14 80.9 137 40.1
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 1.8e-12 76.6 44 72.7
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 3.8e-10 68.9 68 41.2
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.1e-09 67.4 69 49.3
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 1.3e-07 60.5 72 38.9


User provided reference genes

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