Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G20030 Striga asiatica HOM05D023019 ORTHO05D013546 9.0e-289 996.1 473 100.0
SGA_v2.0_scaffold386G50502 Striga asiatica HOM05D023019 ORTHO05D013546 3.6e-205 718.4 465 78.3
SGA_v2.0_scaffold386G50500 Striga asiatica HOM05D023019 ORTHO05D013546 6.9e-204 714.1 456 79.4
SGA_v2.0_scaffold189G40374 Striga asiatica HOM05D023019 ORTHO05D013546 4.5e-139 498.8 342 74.6
SGA_v2.0_scaffold80G25794 Striga asiatica HOM05D012549 ORTHO05D013546 2.0e-41 174.5 447 30.2
SGA_v2.0_scaffold94G28510 Striga asiatica HOM05D012549 ORTHO05D013546 5.0e-37 159.8 445 30.8
SGA_v2.0_scaffold199G41212 Striga asiatica HOM05D012549 ORTHO05D013546 3.6e-35 153.7 454 29.3
SGA_v2.0_scaffold80G25772 Striga asiatica HOM05D012549 ORTHO05D013546 3.0e-34 150.6 448 30.1
SGA_v2.0_scaffold80G25855 Striga asiatica HOM05D012549 ORTHO05D013546 3.3e-33 147.1 456 28.7
SGA_v2.0_scaffold98G29332 Striga asiatica HOM05D012549 ORTHO05D013546 7.5e-33 146.0 442 30.1
SGA_v2.0_scaffold98G29336 Striga asiatica HOM05D012549 ORTHO05D013546 4.1e-31 140.2 450 29.3
SGA_v2.0_scaffold80G25779 Striga asiatica HOM05D012549 ORTHO05D013546 3.7e-24 117.1 322 29.5
SGA_v2.0_scaffold98G29327 Striga asiatica HOM05D012549 ORTHO05D013546 1.8e-15 88.2 367 25.1
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 5.9e-14 83.2 278 30.2
CANSAT78G0001 Cannabis sativa HOM05D012549 ORTHO05D013546 1.7e-13 81.6 373 25.5
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-13 80.1 323 26.3
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 1.5e-12 78.6 436 24.3
CANSAT78G1812 Cannabis sativa HOM05D012549 ORTHO05D013546 5.6e-12 76.6 362 26.5
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 2.8e-11 74.3 294 27.6
PSO210G4092 Papaver somniferum HOM05D008326 ORTHO05D001155 8.0e-11 72.8 306 27.5
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 8.0e-11 72.8 317 28.1
Potri.011G000700 Populus trichocarpa HOM05D001729 ORTHO05D001155 3.1e-10 70.9 235 29.4
CANSAT54G0181 Cannabis sativa HOM05D023019 ORTHO05D013546 4.0e-10 70.5 442 24.9
Aa31LG11G8430 Aethionema arabicum HOM05D007162 ORTHO05D007631 1.5e-09 68.6 176 29.5
FAN09G3613 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-09 68.6 306 25.5
Potri.009G132400 Populus trichocarpa HOM05D001729 ORTHO05D001155 2.2e-08 64.7 221 29.0
AUR62006002 Chenopodium quinoa HOM05D001729 ORTHO05D001155 2.9e-08 64.3 411 23.1
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-08 64.3 467 21.6
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 2.9e-08 64.3 226 28.3
QL07p036110 Quercus lobata HOM05D001729 ORTHO05D001155 3.7e-08 63.9 264 26.9
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 4.9e-08 63.5 262 28.2
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 6.4e-08 63.2 466 20.8
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 6.4e-08 63.2 128 32.8
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.4e-08 63.2 128 32.8
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-07 62.4 245 27.8
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.9e-07 61.6 189 25.9
FvH4_6g03380 Fragaria vesca HOM05D001729 ORTHO05D001155 1.9e-07 61.6 245 27.8
PSO161G0051 Papaver somniferum HOM05D008326 ORTHO05D001155 1.9e-07 61.6 276 23.6
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 2.4e-07 61.2 415 22.7
Duzib177G1156 Durio zibethinus HOM05D000664 ORTHO05D000491 2.4e-07 61.2 270 24.1
FvH4_6g37041 Fragaria vesca HOM05D001729 ORTHO05D001155 2.4e-07 61.2 229 27.5
FAN02G2750 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.4e-07 61.2 245 26.9
Lsat_1_v5_gn_1_40801 Lactuca sativa HOM05D007162 ORTHO05D007631 3.2e-07 60.8 185 27.0
AL8G23420 Arabidopsis lyrata HOM05D007162 ORTHO05D007631 5.4e-07 60.1 217 24.9
FAN05G5452 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-07 60.1 245 26.9
FAN20G1095 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-07 60.1 283 26.1
Lsat_1_v5_gn_9_51201 Lactuca sativa HOM05D000664 ORTHO05D000491 5.4e-07 60.1 219 26.5
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 5.4e-07 60.1 269 25.3
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 5.4e-07 60.1 230 26.5
RcHm_v2.0_Chr4g0426111 Rosa chinensis HOM05D007162 ORTHO05D007631 5.4e-07 60.1 238 25.6
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 7.0e-07 59.7 209 26.3
Duzib151G0437 Durio zibethinus HOM05D007162 ORTHO05D007631 7.0e-07 59.7 172 29.1
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 7.0e-07 59.7 292 27.4
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 7.0e-07 59.7 445 22.9
CANSAT78G1184 Cannabis sativa HOM05D007162 ORTHO05D007631 9.2e-07 59.3 179 28.5
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 9.2e-07 59.3 268 25.4
PSO210G0402 Papaver somniferum HOM05D008326 ORTHO05D001155 9.2e-07 59.3 204 22.5
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 1.2e-06 58.9 257 25.3
unitig_0.g2579 Utricularia gibba HOM05D007162 ORTHO05D007631 1.2e-06 58.9 186 26.9
Ciclev10005014m.g Citrus clementina HOM05D007162 ORTHO05D007631 1.6e-06 58.5 165 27.9
Migut.F01254 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.6e-06 58.5 241 26.1
COL.COLO4_32997 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.0e-06 58.2 211 26.5
Nn4g25520 Nelumbo nucifera HOM05D007162 ORTHO05D007631 2.0e-06 58.2 209 27.8
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 2.7e-06 57.8 285 24.6
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 2.7e-06 57.8 399 24.8
FvH4_4g20690 Fragaria vesca HOM05D007162 ORTHO05D007631 3.5e-06 57.4 238 26.1
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 3.5e-06 57.4 234 27.4
THA.LOC104818869 Tarenaya hassleriana HOM05D007162 ORTHO05D007631 3.5e-06 57.4 165 27.9
Carub.0008s0947 Capsella rubella HOM05D007162 ORTHO05D007631 4.6e-06 57.0 218 25.7
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 4.6e-06 57.0 277 23.5
Duzib212G0788 Durio zibethinus HOM05D007162 ORTHO05D007631 4.6e-06 57.0 173 30.1
PSO063G2324 Papaver somniferum HOM05D008326 ORTHO05D001155 4.6e-06 57.0 255 22.7
PSO210G1832 Papaver somniferum HOM05D008326 ORTHO05D001155 4.6e-06 57.0 276 24.6
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 4.6e-06 57.0 208 26.0
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 6.0e-06 56.6 282 24.1
Ah.07g204710 Amaranthus hybridus HOM05D001729 ORTHO05D001155 7.8e-06 56.2 231 26.8
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.8e-06 56.2 409 21.5
TAR362G1081 Trochodendron aralioides HOM05D007162 ORTHO05D007631 7.8e-06 56.2 258 26.7


User provided reference genes

Program Settings