Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G19922 Striga asiatica HOM05D027498 ORTHO05D007344 9.6e-113 410.2 213 100.0
SGA_v2.0_scaffold11G05594 Striga asiatica HOM05D027498 ORTHO05D007344 1.1e-20 104.4 96 62.5
SGA_v2.0_scaffold157G37402 Striga asiatica HOM05D027498 ORTHO05D007344 3.1e-18 96.3 66 74.2
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 4.6e-14 82.4 103 47.6
COL.COLO4_21412 Corchorus olitorius HOM05D019187 ORTHO05D007344 2.3e-10 70.1 89 44.9
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-09 67.0 83 44.6
ECA248G2624 Erigeron canadensis HOM05D000030 ORTHO05D000009 2.6e-09 66.6 119 37.8
ECA238G0867 Erigeron canadensis HOM05D000030 ORTHO05D000009 3.4e-09 66.2 86 39.5
SHI29056 Sapria himalayana HOM05D000030 ORTHO05D000009 3.4e-09 66.2 93 43.0
COL.COLO4_35746 Corchorus olitorius HOM05D019187 ORTHO05D007344 5.8e-09 65.5 100 42.0
Dinv30132 Davidia involucrata HOM05D022692 ORTHO05D020547 7.5e-09 65.1 77 40.3
Dinv16326 Davidia involucrata HOM05D022692 ORTHO05D020547 1.3e-08 64.3 77 40.3
Dinv22059 Davidia involucrata HOM05D022575 ORTHO05D020547 1.3e-08 64.3 162 31.5
Dinv22429 Davidia involucrata HOM05D022575 ORTHO05D020547 1.3e-08 64.3 160 30.0
ECA238G4412 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.3e-08 64.3 119 37.0
SHI07448 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-08 64.3 75 44.0
SHI17255 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-08 63.9 66 48.5
COL.COLO4_20865 Corchorus olitorius HOM05D019187 ORTHO05D007344 2.2e-08 63.5 128 37.5
Dinv32675 Davidia involucrata HOM05D022575 ORTHO05D020547 2.2e-08 63.5 160 33.1
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-08 63.5 96 40.6
SHI19978 Sapria himalayana HOM05D000030 ORTHO05D000009 2.2e-08 63.5 84 42.9
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.9e-08 63.2 94 39.4
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 3.7e-08 62.8 94 39.4
SHI15418 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-08 62.8 76 43.4
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 4.9e-08 62.4 94 39.4
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 4.9e-08 62.4 94 39.4
SHI00319 Sapria himalayana HOM05D000030 ORTHO05D007344 4.9e-08 62.4 83 43.4
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 4.9e-08 62.4 76 43.4
COL.COLO4_03620 Corchorus olitorius HOM05D019187 ORTHO05D007344 6.4e-08 62.0 100 40.0
Dinv44703 Davidia involucrata HOM05D022692 ORTHO05D020547 6.4e-08 62.0 81 39.5
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 6.4e-08 62.0 115 35.7
SGA_v2.0_scaffold2G01281 Striga asiatica HOM05D017085 ORTHO05D026193 6.4e-08 62.0 132 31.1
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 6.4e-08 62.0 76 40.8
EL10Ac2g03260 Beta vulgaris HOM05D000030 ORTHO05D000009 8.3e-08 61.6 118 35.6
AUR62042243 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.3e-08 61.6 96 39.6
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.3e-08 61.6 115 35.7
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.4e-07 60.8 141 32.6
SHI16790 Sapria himalayana HOM05D000030 ORTHO05D007344 1.4e-07 60.8 83 43.4
SGA_v2.0_scaffold8G04347 Striga asiatica HOM05D027498 ORTHO05D404296 1.4e-07 60.8 137 37.2
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.9e-07 60.5 62 48.4
SHI03791 Sapria himalayana HOM05D000030 ORTHO05D007344 1.9e-07 60.5 75 41.3
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 2.4e-07 60.1 116 34.5
EL10Ac8g20320 Beta vulgaris HOM05D019187 ORTHO05D007344 3.2e-07 59.7 93 38.7
MBI13_g29288_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D001260 3.2e-07 59.7 51 47.1
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 5.4e-07 58.9 73 39.7
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 9.2e-07 58.2 158 32.3
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 9.2e-07 58.2 110 39.1
Lj6g0002297 Lotus japonicus HOM05D000030 ORTHO05D000009 9.2e-07 58.2 109 33.9
MBI07_g04031_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 9.2e-07 58.2 51 45.1
MBI08_g18905_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 9.2e-07 58.2 64 45.3
MBI19_g21657_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 9.2e-07 58.2 83 41.0
SHI00423 Sapria himalayana HOM05D000030 ORTHO05D000009 9.2e-07 58.2 75 41.3
MBI18_g15857_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 1.2e-06 57.8 55 52.7
COL.COLO4_13713 Corchorus olitorius HOM05D019187 ORTHO05D007344 2.1e-06 57.0 93 40.9
Gohir.D01G106966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 2.1e-06 57.0 52 50.0
Gorai.002G131300 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.1e-06 57.0 52 50.0
Rhsim09G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-06 56.6 186 31.7
COL.COLO4_35574 Corchorus olitorius HOM05D000030 ORTHO05D007344 3.5e-06 56.2 82 42.7
Hma1.2p1_0074F.1_g039110 Hydrangea macrophylla HOM05D000030 ORTHO05D007344 3.5e-06 56.2 86 39.5
MBI08_g39928_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 3.5e-06 56.2 66 45.5
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.5e-06 56.2 170 29.4
MBI03_g02702_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 4.6e-06 55.8 80 38.8
Rhsim10G0072900 Rhododendron simsii HOM05D001288 ORTHO05D001123 4.6e-06 55.8 62 46.8
SGA_v2.0_scaffold4165G54433 Striga asiatica HOM05D017085 ORTHO05D026193 4.6e-06 55.8 86 32.6
Dinv20514 Davidia involucrata HOM05D022692 ORTHO05D020547 6.0e-06 55.5 92 35.9
Dinv20529 Davidia involucrata HOM05D003557 ORTHO05D001267 6.0e-06 55.5 92 35.9
MBI05_g22563_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 6.0e-06 55.5 98 38.8
Manes.07G065770 Manihot esculenta HOM05D000030 ORTHO05D000009 6.0e-06 55.5 123 33.3
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.8e-06 55.1 150 34.0
MBI12_g14583_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 7.8e-06 55.1 66 43.9


User provided reference genes

Program Settings