Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 9.7e-155 550.1 268 100.0
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 2.1e-104 382.9 275 69.5
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 6.6e-103 377.9 275 69.5
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 2.1e-101 372.9 275 68.7
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 4.4e-99 365.2 276 65.9
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 2.2e-98 362.8 276 66.7
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 3.2e-97 359.0 276 65.9
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 2.1e-96 356.3 276 67.8
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 4.6e-96 355.1 273 67.4
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 4.6e-96 355.1 276 65.9
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 7.8e-96 354.4 276 67.4
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 7.8e-96 354.4 268 67.9
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 2.3e-95 352.8 276 66.3
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 3.9e-95 352.1 276 67.0
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 3.9e-95 352.1 276 64.5
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 1.1e-94 350.5 276 65.6
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.9e-94 349.7 276 64.5
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 2.5e-94 349.4 276 64.5
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 2.5e-94 349.4 276 63.8
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 5.6e-94 348.2 295 64.4
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 7.3e-94 347.8 276 65.6
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 9.6e-94 347.4 276 65.6
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 3.6e-93 345.5 276 64.9
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 3.6e-93 345.5 275 63.3
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 4.7e-93 345.1 277 65.7
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 4.7e-93 345.1 277 65.7
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 4.7e-93 345.1 276 64.1
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 6.2e-93 344.7 276 65.2
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 6.2e-93 344.7 276 65.6
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 6.2e-93 344.7 276 65.2
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 6.2e-93 344.7 275 64.4
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 1.4e-92 343.6 275 65.5
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 1.4e-92 343.6 276 64.5
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 1.4e-92 343.6 275 63.3
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 1.4e-92 343.6 278 65.1
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 1.8e-92 343.2 276 64.5
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 1.8e-92 343.2 276 64.1
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 2.4e-92 342.8 275 64.4
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 2.4e-92 342.8 278 64.4
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 2.4e-92 342.8 275 64.4
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 3.1e-92 342.4 276 63.0
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 4.0e-92 342.0 276 64.5
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 4.0e-92 342.0 276 64.5
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 5.3e-92 341.7 276 64.9
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 6.9e-92 341.3 268 64.9
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 6.9e-92 341.3 268 64.9
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 6.9e-92 341.3 269 65.1
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 1.2e-91 340.5 276 64.5
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 1.5e-91 340.1 275 64.4
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 2.0e-91 339.7 284 63.4
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 2.0e-91 339.7 267 63.7
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 2.6e-91 339.3 268 64.2
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 2.6e-91 339.3 276 65.6
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 2.6e-91 339.3 276 65.2
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 3.4e-91 339.0 268 64.2
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 4.4e-91 338.6 268 63.4
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 4.4e-91 338.6 277 64.3
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 7.6e-91 337.8 276 63.8
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 7.6e-91 337.8 280 63.9
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 9.9e-91 337.4 277 63.9
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 1.3e-90 337.0 276 63.4
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 1.3e-90 337.0 268 64.6
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 1.7e-90 336.7 276 64.1
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 1.7e-90 336.7 276 64.1
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 2.2e-90 336.3 262 66.4
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 3.8e-90 335.5 275 62.9
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 4.9e-90 335.1 268 63.8
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 6.4e-90 334.7 274 63.1
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 8.4e-90 334.3 278 64.4
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 1.1e-89 334.0 268 62.7
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.1e-89 334.0 268 63.4
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 1.4e-89 333.6 275 61.8
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.4e-89 333.6 275 62.2
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 1.4e-89 333.6 276 63.0
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 9.3e-89 330.9 289 60.9
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 1.2e-88 330.5 275 61.1
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 1.2e-88 330.5 276 62.0
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 1.6e-88 330.1 301 58.1
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 2.1e-88 329.7 276 63.8
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 2.7e-88 329.3 278 62.6
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 4.6e-88 328.6 268 62.7
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 4.6e-88 328.6 268 63.4
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.0e-87 327.4 289 59.9
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 2.3e-87 326.2 275 61.1
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 3.9e-87 325.5 276 62.7
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 1.1e-86 323.9 268 63.1
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 1.9e-86 323.2 275 61.8
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 3.3e-86 322.4 268 62.3
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 2.8e-85 319.3 277 63.2
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 2.4e-84 316.2 292 59.6
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 5.3e-84 315.1 260 63.5
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 1.3e-77 293.9 267 58.1
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 2.7e-72 276.2 284 53.5
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 1.8e-71 273.5 277 53.1
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 3.0e-71 272.7 310 50.6
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 1.9e-70 270.0 247 58.7
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 4.9e-66 255.4 284 51.4
Aqoxy6G00570 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 3.3e-62 242.7 211 62.1
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 3.1e-60 236.1 299 45.2
ATR0767G136 Amborella trichopoda HOM05D002866 ORTHO05D008929 8.8e-55 218.0 182 61.0
CDE11G0041 Ceratophyllum demersum HOM05D002866 ORTHO05D008929 6.3e-53 211.8 166 63.9
ATR0057G117 Amborella trichopoda HOM05D002866 ORTHO05D008929 3.1e-52 209.5 182 59.3
ClCG07G016910 Citrullus lanatus HOM05D002866 ORTHO05D008929 1.1e-49 201.1 157 63.7
SEGI_24637 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 5.5e-49 198.7 165 58.8
SEGI_35611 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 5.5e-49 198.7 165 58.8
PRCOL_00000617 Prasinoderma coloniale HOM05D002866 ORTHO05D008929 1.4e-41 174.1 260 40.0
Haze_26420 Corylus avellana HOM05D002866 ORTHO05D008929 2.6e-35 153.3 249 38.2
Glyma.14G148200 Glycine max HOM05D002866 ORTHO05D008929 7.2e-33 145.2 104 64.4
MELO3C017653.2 Cucumis melo HOM05D002866 ORTHO05D008929 1.4e-31 141.0 99 66.7
Dinv06583 Davidia involucrata HOM05D002866 ORTHO05D008929 2.4e-28 130.2 76 84.2
GSVIVG01013998001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.3e-26 124.4 77 75.3
AL365U10020 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 1.4e-23 114.4 67 77.6
GSVIVG01013994001 Vitis vinifera HOM05D002866 ORTHO05D008929 8.8e-23 111.7 64 81.2
FAN01G2533 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.3e-18 97.8 53 84.9
Gohir.A05G206000 Gossypium hirsutum HOM05D002101 ORTHO05D002126 1.4e-07 61.2 183 29.0
Gohir.D05G209300 Gossypium hirsutum HOM05D002101 ORTHO05D002126 1.4e-07 61.2 183 29.0
Gorai.009G215700 Gossypium raimondii HOM05D002101 ORTHO05D002126 1.4e-07 61.2 183 29.0
Glyma.05G018300 Glycine max HOM05D002101 ORTHO05D002126 1.8e-07 60.8 173 27.2
THA.LOC104825759 Tarenaya hassleriana HOM05D002101 ORTHO05D002126 1.8e-07 60.8 185 28.6
Hund09953 Selenicereus undatus HOM05D002101 ORTHO05D002126 8.9e-07 58.5 242 24.4
Ah.11g047450 Amaranthus hybridus HOM05D002101 ORTHO05D002126 1.2e-06 58.2 173 30.1
Phvul.003G182400 Phaseolus vulgaris HOM05D002101 ORTHO05D002126 1.2e-06 58.2 171 28.7
Pp3c8_21770 Physcomitrium patens HOM05D002101 ORTHO05D002126 2.0e-06 57.4 262 26.7
Sc12g0006890 Simmondsia chinensis HOM05D002101 ORTHO05D002126 7.5e-06 55.5 173 25.4
Aa31LG8G3280 Aethionema arabicum HOM05D002101 ORTHO05D002126 9.8e-06 55.1 185 28.1
Psat4g046120 Pisum sativum HOM05D002101 ORTHO05D002126 9.8e-06 55.1 178 28.7
VMungo1309G3060 Vigna mungo HOM05D002101 ORTHO05D002126 9.8e-06 55.1 179 26.8


User provided reference genes

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