Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 1.1e-130 469.9 237 100.0
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 1.3e-107 393.3 240 82.1
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.3e-105 386.7 240 81.2
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 2.6e-103 379.0 238 81.1
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 4.5e-103 378.3 238 81.1
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 5.8e-103 377.9 226 84.1
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 7.6e-103 377.5 240 79.6
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 7.6e-103 377.5 238 81.5
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.0e-102 377.1 237 80.2
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.7e-102 376.3 238 79.8
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 2.2e-102 375.9 241 78.8
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.9e-102 375.6 238 79.4
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 8.4e-102 374.0 238 79.0
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.1e-101 373.6 238 79.0
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.1e-101 373.6 238 79.0
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 1.1e-101 373.6 239 79.5
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.9e-101 372.9 238 79.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.5e-101 372.5 226 83.2
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 3.2e-101 372.1 238 78.6
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 3.2e-101 372.1 238 78.6
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 7.1e-101 370.9 238 79.0
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 9.3e-101 370.5 238 77.7
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 9.3e-101 370.5 238 78.6
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 1.2e-100 370.2 238 79.4
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 1.6e-100 369.8 238 79.0
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.7e-100 369.0 234 80.8
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 3.5e-100 368.6 238 77.3
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 1.0e-99 367.1 237 75.9
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.0e-99 367.1 239 77.8
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 1.0e-99 367.1 226 81.0
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 2.3e-99 365.9 227 78.9
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.9e-98 362.8 238 76.5
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 1.9e-98 362.8 240 78.3
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 2.5e-98 362.5 227 79.3
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.5e-98 362.5 236 77.5
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 2.5e-98 362.5 238 77.7
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 3.3e-98 362.1 227 79.7
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 3.3e-98 362.1 238 78.2
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 4.3e-98 361.7 239 76.2
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 4.3e-98 361.7 239 76.2
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 5.7e-98 361.3 238 75.6
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 5.7e-98 361.3 242 76.0
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 5.7e-98 361.3 238 76.9
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 9.7e-98 360.5 238 76.1
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 1.3e-97 360.1 238 78.2
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.3e-97 360.1 227 78.0
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 1.6e-97 359.8 238 75.6
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 2.8e-97 359.0 238 76.1
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 2.8e-97 359.0 237 79.3
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 2.8e-97 359.0 227 79.3
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 3.7e-97 358.6 221 81.4
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 3.7e-97 358.6 221 80.1
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 3.7e-97 358.6 221 80.1
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 3.7e-97 358.6 238 75.2
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 3.7e-97 358.6 238 75.2
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 4.8e-97 358.2 237 77.2
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 6.3e-97 357.8 238 74.8
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 8.2e-97 357.5 238 76.5
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 8.2e-97 357.5 238 75.2
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 8.2e-97 357.5 238 74.8
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 8.2e-97 357.5 237 75.5
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 1.1e-96 357.1 234 78.2
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 1.8e-96 356.3 238 77.7
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 2.4e-96 355.9 237 75.9
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 2.4e-96 355.9 237 75.9
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 2.4e-96 355.9 227 78.0
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 3.1e-96 355.5 238 74.8
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 4.1e-96 355.1 238 74.4
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 5.3e-96 354.8 237 74.7
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 6.9e-96 354.4 238 75.6
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 9.0e-96 354.0 238 76.1
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 9.0e-96 354.0 227 78.9
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 9.0e-96 354.0 227 78.4
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 2.0e-95 352.8 237 75.9
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 2.0e-95 352.8 239 75.7
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 2.6e-95 352.4 238 76.1
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 3.4e-95 352.1 237 74.7
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 4.5e-95 351.7 237 74.3
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 4.5e-95 351.7 237 73.4
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 4.5e-95 351.7 238 76.1
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 4.5e-95 351.7 238 75.2
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 7.7e-95 350.9 236 77.5
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 7.7e-95 350.9 226 78.8
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.0e-94 350.5 238 74.4
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.3e-94 350.1 235 76.2
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 2.2e-94 349.4 224 77.2
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 3.8e-94 348.6 225 78.2
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 8.5e-94 347.4 224 76.8
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 8.5e-94 347.4 228 75.0
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 3.2e-93 345.5 226 77.0
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 3.2e-93 345.5 225 77.8
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 4.2e-93 345.1 224 75.9
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 4.2e-93 345.1 221 76.5
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 5.5e-93 344.7 237 72.2
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 1.2e-92 343.6 233 74.7
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 2.1e-92 342.8 238 71.8
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 2.1e-92 342.8 223 76.2
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 2.7e-92 342.4 237 73.4
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 2.7e-92 342.4 223 75.3
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 3.6e-92 342.0 240 72.5
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.4e-91 340.1 226 75.2
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.4e-91 340.1 236 72.9
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 8.8e-91 337.4 304 61.8
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 2.0e-90 336.3 261 68.2
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 2.4e-88 329.3 321 58.9
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 3.1e-88 328.9 225 70.7
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 9.1e-88 327.4 239 71.5
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 1.2e-87 327.0 237 70.0
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.5e-87 326.6 225 71.6
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 3.0e-83 312.4 221 67.4
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 3.9e-83 312.0 237 68.4
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 6.7e-83 311.2 237 68.8
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 3.7e-81 305.4 238 67.2
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.8e-80 303.1 187 80.2
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 2.4e-80 302.8 194 78.4
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 5.3e-80 301.6 216 64.4
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 7.0e-80 301.2 238 65.1
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.0e-79 299.7 236 67.8
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 7.7e-79 297.7 216 63.9
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 8.5e-78 294.3 197 74.1
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 2.5e-77 292.7 183 77.6
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 9.4e-77 290.8 227 59.5
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 3.9e-75 285.4 232 66.4
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 6.7e-75 284.6 192 74.0
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 4.5e-71 271.9 234 62.8
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 1.4e-67 260.4 163 82.2
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 4.0e-67 258.8 167 76.0
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 1.2e-66 257.3 196 67.3
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.1e-56 224.2 162 66.0
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 9.5e-53 211.1 218 48.6
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 4.0e-43 179.1 105 85.7
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 4.9e-41 172.2 118 68.6
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 8.6e-38 161.4 189 41.3
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 2.5e-29 133.3 97 73.2
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 4.9e-25 119.0 209 34.0
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 8.7e-06 55.1 73 41.1


User provided reference genes

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