Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19859 Striga asiatica HOM05D000003 ORTHO05D000006 0.0e+00 1149.0 576 100.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 4.8e-18 97.1 285 29.5
SGA_v2.0_scaffold18G08392 Striga asiatica HOM05D000003 ORTHO05D000006 8.3e-18 96.3 89 50.6
SGA_v2.0_scaffold55G19740 Striga asiatica HOM05D000003 ORTHO05D000004 5.9e-16 90.1 224 30.4
SGA_v2.0_scaffold6G03465 Striga asiatica HOM05D000003 ORTHO05D000006 5.0e-15 87.0 84 47.6
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 5.5e-14 83.6 458 22.3
SGA_v2.0_scaffold165G38197 Striga asiatica HOM05D000003 ORTHO05D000006 5.5e-14 83.6 89 44.9
SGA_v2.0_scaffold200G41298 Striga asiatica HOM05D000003 ORTHO05D000006 5.5e-14 83.6 89 44.9
SGA_v2.0_scaffold451G51811 Striga asiatica HOM05D058879 ORTHO05D000006 1.2e-13 82.4 74 50.0
SGA_v2.0_scaffold107G30811 Striga asiatica HOM05D000003 ORTHO05D000006 1.6e-13 82.0 109 41.3
SGA_v2.0_scaffold67G22780 Striga asiatica HOM05D000003 ORTHO05D000006 2.7e-13 81.3 85 47.1
SGA_v2.0_scaffold74G24657 Striga asiatica HOM05D000003 ORTHO05D000006 8.0e-13 79.7 129 35.7
SGA_v2.0_scaffold38G15038 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-12 79.0 80 46.2
SGA_v2.0_scaffold301G47800 Striga asiatica HOM05D000003 ORTHO05D000006 1.8e-12 78.6 80 45.0
SGA_v2.0_scaffold9G04700 Striga asiatica HOM05D000003 ORTHO05D000006 1.8e-12 78.6 83 50.6
SGA_v2.0_scaffold12G05963 Striga asiatica HOM05D000003 ORTHO05D000006 5.2e-12 77.0 81 39.5
SGA_v2.0_scaffold231G43458 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-12 76.6 83 38.6
SGA_v2.0_scaffold298G47692 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-12 76.6 84 40.5
SGA_v2.0_scaffold64G22078 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-12 76.6 89 40.4
SGA_v2.0_scaffold139G35393 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-11 75.9 98 42.9
SGA_v2.0_scaffold43G16292 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-11 75.9 109 42.2
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-11 75.5 468 22.0
SGA_v2.0_scaffold154G37136 Striga asiatica HOM05D017085 ORTHO05D000006 3.4e-11 74.3 86 43.0
SGA_v2.0_scaffold29G12078 Striga asiatica HOM05D000003 ORTHO05D000006 3.4e-11 74.3 92 40.2
SGA_v2.0_scaffold176G39399 Striga asiatica HOM05D024619 ORTHO05D000006 4.4e-11 73.9 73 46.6
SGA_v2.0_scaffold116G32202 Striga asiatica HOM05D000024 ORTHO05D000006 5.7e-11 73.6 82 42.7
SGA_v2.0_scaffold409G51103 Striga asiatica HOM05D000003 ORTHO05D000006 7.5e-11 73.2 76 50.0
SGA_v2.0_scaffold14G06828 Striga asiatica HOM05D002039 ORTHO05D005834 9.8e-11 72.8 62 56.5
SGA_v2.0_scaffold14G07079 Striga asiatica HOM05D000003 ORTHO05D000006 1.3e-10 72.4 82 40.2
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-10 71.2 458 20.3
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-10 71.2 83 47.0
SGA_v2.0_scaffold84G26526 Striga asiatica HOM05D018498 ORTHO05D000006 2.8e-10 71.2 107 38.3
SGA_v2.0_scaffold128G34102 Striga asiatica HOM05D000003 ORTHO05D000006 4.9e-10 70.5 96 38.5
SGA_v2.0_scaffold821G53642 Striga asiatica HOM05D000003 ORTHO05D000006 8.3e-10 69.7 82 40.2
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-09 69.3 302 23.5
SGA_v2.0_scaffold134G34702 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-09 68.9 101 35.6
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 1.8e-09 68.6 78 42.3
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 3.1e-09 67.8 458 21.4
SGA_v2.0_scaffold83G26411 Striga asiatica HOM05D000003 ORTHO05D000006 3.1e-09 67.8 82 37.8
SGA_v2.0_scaffold2352G54103 Striga asiatica HOM05D011952 ORTHO05D000006 5.4e-09 67.0 83 34.9
SGA_v2.0_scaffold5G03033 Striga asiatica HOM05D000003 ORTHO05D000006 5.4e-09 67.0 87 41.4
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 7.0e-09 66.6 90 40.0
Rhsim03G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.2e-09 66.2 299 22.1
CANSAT11G0437 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-08 65.9 290 22.8
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-08 65.9 64 50.0
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 1.6e-08 65.5 96 36.5
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-08 65.1 379 24.3
CANSAT25G1294 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-08 64.7 282 23.0
SGA_v2.0_scaffold16G07515 Striga asiatica HOM05D041003 ORTHO05D000006 2.7e-08 64.7 81 39.5
SGA_v2.0_scaffold272G46371 Striga asiatica HOM05D000003 ORTHO05D000006 3.5e-08 64.3 82 39.0
SGA_v2.0_scaffold593G53094 Striga asiatica HOM05D000003 ORTHO05D000006 3.5e-08 64.3 126 34.1
CANSAT80G2477 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-08 63.9 168 26.2
Cc04_g12750 Coffea canephora HOM05D000170 ORTHO05D000154 4.5e-08 63.9 128 31.2
SGA_v2.0_scaffold31G12850 Striga asiatica HOM05D000003 ORTHO05D000006 4.5e-08 63.9 73 38.4
CANSAT01G3235 Cannabis sativa HOM05D000003 ORTHO05D000004 5.9e-08 63.5 135 31.9
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 7.7e-08 63.2 52 53.8
SGA_v2.0_scaffold8G04556 Striga asiatica HOM05D000024 ORTHO05D000006 7.7e-08 63.2 76 44.7
Rhsim03G0079300 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.0e-07 62.8 337 22.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.0e-07 62.8 83 42.2
QL08p015792 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-07 62.4 174 27.0
Manes.01G203601 Manihot esculenta HOM05D000003 ORTHO05D000006 1.7e-07 62.0 83 39.8
Nitab4.5_0005181g0030 Nicotiana tabacum HOM05D015265 ORTHO05D014660 1.7e-07 62.0 79 38.0
CANSAT35G0331 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-07 61.2 193 26.4
Hma1.2p1_0989F.1_g244760 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 2.9e-07 61.2 86 39.5
Rhsim02G0183800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.9e-07 61.2 313 23.3
SGA_v2.0_scaffold3G01490 Striga asiatica HOM05D030754 ORTHO05D000004 2.9e-07 61.2 241 25.3
SGA_v2.0_scaffold109G31166 Striga asiatica HOM05D011952 ORTHO05D000006 8.6e-07 59.7 82 35.4
BolC4t23478H Brassica oleracea HOM05D000003 ORTHO05D000006 1.1e-06 59.3 122 31.1
Manes.18G036550 Manihot esculenta HOM05D000003 ORTHO05D000006 1.1e-06 59.3 83 39.8
CANSAT54G0890 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 58.9 245 23.3
Sopen03g020890 Solanum pennellii HOM05D000003 ORTHO05D000006 1.5e-06 58.9 153 26.1
CANSAT35G0600 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 58.5 310 22.6
CANSAT35G1735 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 58.5 132 30.3
Sopen02g028850 Solanum pennellii HOM05D015265 ORTHO05D014660 1.9e-06 58.5 75 38.7
SGA_v2.0_scaffold9G04917 Striga asiatica HOM05D007190 ORTHO05D009130 1.9e-06 58.5 69 40.6
BolC7t41786H Brassica oleracea HOM05D000003 ORTHO05D011507 2.5e-06 58.2 201 27.4
Nitab4.5_0001243g0060 Nicotiana tabacum HOM05D015265 ORTHO05D014660 2.5e-06 58.2 76 36.8
BraA07t30522Z Brassica rapa HOM05D000003 ORTHO05D000006 3.3e-06 57.8 128 28.9
Nitab4.5_0011919g0030 Nicotiana tabacum HOM05D015265 ORTHO05D014660 3.3e-06 57.8 78 34.6
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 5.6e-06 57.0 123 32.5
CANSAT80G0272 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 57.0 211 26.1
CANSAT54G2519 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 56.6 140 27.9
CANSAT64G2432 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 56.6 77 39.0
QL03p033496 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-06 56.6 220 25.0
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 7.3e-06 56.6 115 29.6
SGA_v2.0_scaffold403G51004 Striga asiatica HOM05D011754 ORTHO05D014689 7.3e-06 56.6 88 42.0
Aa31LG11G6720 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.5e-06 56.2 76 36.8
Aa31sc129G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.5e-06 56.2 166 24.7
CSS0003312 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-06 56.2 170 29.4
QL04p064704 Quercus lobata HOM05D000003 ORTHO05D000126 9.5e-06 56.2 75 37.3


User provided reference genes

Program Settings