Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19857 Striga asiatica HOM05D014377 ORTHO05D000006 3.0e-145 518.5 258 100.0
SGA_v2.0_scaffold55G19855 Striga asiatica HOM05D014377 ORTHO05D401784 5.0e-47 192.2 99 97.0
SGA_v2.0_scaffold132G34510 Striga asiatica HOM05D014377 ORTHO05D000006 4.6e-37 159.1 85 90.6
SGA_v2.0_scaffold141G35567 Striga asiatica HOM05D014377 ORTHO05D000006 7.9e-37 158.3 90 84.4
SGA_v2.0_scaffold177G39404 Striga asiatica HOM05D014377 ORTHO05D000006 7.9e-37 158.3 83 91.6
SGA_v2.0_scaffold3605G54368 Striga asiatica HOM05D014377 ORTHO05D000006 1.0e-36 157.9 90 85.6
SGA_v2.0_scaffold82G26187 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-36 157.5 83 91.6
SGA_v2.0_scaffold261G45921 Striga asiatica HOM05D014377 ORTHO05D000006 5.7e-35 152.1 89 83.1
SGA_v2.0_scaffold38G15068 Striga asiatica HOM05D000003 ORTHO05D000006 2.6e-32 143.3 115 62.6
SGA_v2.0_scaffold328G48786 Striga asiatica HOM05D014377 ORTHO05D000006 3.8e-31 139.4 85 83.5
SGA_v2.0_scaffold72G24142 Striga asiatica HOM05D014377 ORTHO05D000006 4.8e-26 122.5 73 80.8
SGA_v2.0_scaffold328G48789 Striga asiatica HOM05D000024 ORTHO05D000006 2.7e-16 90.1 59 76.3
SHI53523 Sapria himalayana HOM05D000003 ORTHO05D000004 2.6e-11 73.6 75 52.0
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 2.6e-11 73.6 75 52.0
PSO386G0019 Papaver somniferum HOM05D000003 ORTHO05D000006 4.8e-10 69.3 118 39.0
MBI05_g04117_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.3e-10 68.9 103 35.9
MBI16_g04481_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 2.4e-09 67.0 87 40.2
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.4e-09 67.0 86 41.9
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.4e-09 67.0 86 41.9
MBI11_g15903_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.4e-09 65.9 104 35.6
MBI17_g31746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.4e-09 65.9 105 34.3
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 9.1e-09 65.1 129 33.3
MBI03_g34697_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.2e-08 64.7 78 39.7
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 1.2e-08 64.7 72 40.3
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 1.6e-08 64.3 129 33.3
MBI07_g42485_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.0e-08 63.9 77 37.7
Aa31LG2G14760 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-08 63.5 104 30.8
Aa31LG7G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-08 63.5 104 30.8
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 2.7e-08 63.5 129 33.3
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 3.5e-08 63.2 81 39.5
MBI01_g02761_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 4.5e-08 62.8 70 42.9
Psat4g054960 Pisum sativum HOM05D000003 ORTHO05D000006 4.5e-08 62.8 74 36.5
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.5e-08 62.8 104 34.6
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 5.9e-08 62.4 129 32.6
MBI01_g27614_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.7e-08 62.0 69 40.6
SHI41315 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 61.6 78 41.0
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 1.0e-07 61.6 130 32.3
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 1.0e-07 61.6 130 32.3
HPP92_023811 Vanilla planifolia HOM05D000003 ORTHO05D000004 1.0e-07 61.6 85 41.2
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-07 61.2 97 29.9
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 1.3e-07 61.2 78 35.9
PSO017G6159 Papaver somniferum HOM05D000003 ORTHO05D000006 1.3e-07 61.2 111 31.5
Thecc.09G159900 Theobroma cacao HOM05D000024 ORTHO05D000006 1.3e-07 61.2 96 37.5
Oeu036834.1 Olea europaea HOM05D000024 ORTHO05D010916 1.7e-07 60.8 82 39.0
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-07 60.8 82 31.7
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.5 103 30.1
Aa31sc85G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.5 88 37.5
Aa31sc85G90 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.2e-07 60.5 79 38.0
SHI46154 Sapria himalayana HOM05D000024 ORTHO05D000006 2.9e-07 60.1 78 38.5
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.9e-07 60.1 77 40.3
MBI10_g04437_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.8e-07 59.7 83 37.3
SHI33976 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-07 59.7 77 37.7
HPP92_005179 Vanilla planifolia HOM05D000003 ORTHO05D000006 3.8e-07 59.7 86 36.0
Atru.chr6.1886 Acer truncatum HOM05D000003 ORTHO05D000006 5.0e-07 59.3 89 36.0
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.0e-07 59.3 78 39.7
PSO674G0028 Papaver somniferum HOM05D000003 ORTHO05D000006 5.0e-07 59.3 107 26.2
Aa31LG10G10100 Aethionema arabicum HOM05D000003 ORTHO05D000006 6.5e-07 58.9 81 34.6
MBI09_g04378_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.5e-07 58.9 77 40.3
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 6.5e-07 58.9 75 38.7
SHI37465 Sapria himalayana HOM05D000003 ORTHO05D000006 6.5e-07 58.9 75 40.0
SHI45782 Sapria himalayana HOM05D000024 ORTHO05D000006 6.5e-07 58.9 50 52.0
SHI55178 Sapria himalayana HOM05D000024 ORTHO05D000006 6.5e-07 58.9 78 38.5
Aa31LG3G6650 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.5e-07 58.5 78 35.9
Aa31sc734G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.5e-07 58.5 79 35.4
SHI47765 Sapria himalayana HOM05D000003 ORTHO05D000004 8.5e-07 58.5 51 52.9
PGSC0003DMG400009747 Solanum tuberosum HOM05D000003 ORTHO05D000006 8.5e-07 58.5 75 38.7
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 58.2 75 34.7
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 58.2 76 31.6
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 58.2 80 37.5
Manes.12G044467 Manihot esculenta HOM05D000003 ORTHO05D000006 1.1e-06 58.2 87 37.9
QL12p002401 Quercus lobata HOM05D000003 ORTHO05D000006 1.1e-06 58.2 69 43.5
RcHm_v2.0_Chr4g0437231 Rosa chinensis HOM05D000003 ORTHO05D000006 1.1e-06 58.2 137 25.5
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 57.8 76 35.5
FvH4_6g17161 Fragaria vesca HOM05D000003 ORTHO05D000006 1.5e-06 57.8 72 41.7
MBI02_g32911_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-06 57.8 107 30.8
MBI15_g18587_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.5e-06 57.8 79 32.9
MBI16_g01014_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.5e-06 57.8 82 32.9
MBI16_g12294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.5e-06 57.8 69 42.0
MBI18_g23808_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.5e-06 57.8 69 43.5
SHI30824 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-06 57.8 83 34.9
TAR308G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.5e-06 57.8 105 30.5
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-06 57.4 77 33.8
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-06 57.4 81 35.8
Nitab4.5_0000049g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.9e-06 57.4 78 35.9
SHI07131 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-06 57.4 77 39.0
SHI34191 Sapria himalayana HOM05D000024 ORTHO05D000006 1.9e-06 57.4 50 50.0
SHI34887 Sapria himalayana HOM05D000024 ORTHO05D000006 1.9e-06 57.4 52 50.0
SEGI_06713 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.9e-06 57.4 121 29.8
SEGI_10757 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.9e-06 57.4 113 31.9
SEGI_19806 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.9e-06 57.4 142 27.5
SEGI_28970 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.9e-06 57.4 80 36.2
Aa31LG2G18920 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-06 57.0 95 30.5
MBI05_g03468_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.5e-06 57.0 79 39.2
SHI04747 Sapria himalayana HOM05D000024 ORTHO05D000006 2.5e-06 57.0 46 54.3
SHI49586 Sapria himalayana HOM05D000024 ORTHO05D000006 2.5e-06 57.0 50 50.0
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-06 56.6 76 38.2
Aa31sc248G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-06 56.6 76 38.2
MBI18_g19074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.2e-06 56.6 71 40.8
SHI37184 Sapria himalayana HOM05D000024 ORTHO05D000006 3.2e-06 56.6 50 50.0
SHI45408 Sapria himalayana HOM05D000024 ORTHO05D000006 3.2e-06 56.6 50 50.0
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-06 56.6 68 41.2
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 56.2 100 29.0
CANSAT54G0363 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-06 56.2 155 24.5
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 4.2e-06 56.2 68 38.2
RcHm_v2.0_Chr5g0026401 Rosa chinensis HOM05D000003 ORTHO05D000006 4.2e-06 56.2 68 38.2
SHI30886 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-06 56.2 71 35.2
SHI54405 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-06 56.2 50 50.0
SHI54474 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-06 56.2 43 55.8
SHI55193 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-06 56.2 50 50.0
MBI03_g17137_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.5e-06 55.8 80 38.8
MBI18_g26031_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.5e-06 55.8 69 43.5
Psat1g196480 Pisum sativum HOM05D000003 ORTHO05D037377 5.5e-06 55.8 106 31.1
SHI28637 Sapria himalayana HOM05D000003 ORTHO05D000004 5.5e-06 55.8 52 48.1
SHI29344 Sapria himalayana HOM05D000024 ORTHO05D000006 5.5e-06 55.8 50 48.0
SHI48246 Sapria himalayana HOM05D000024 ORTHO05D000006 5.5e-06 55.8 50 50.0
SHI55191 Sapria himalayana HOM05D000024 ORTHO05D000006 5.5e-06 55.8 50 50.0
TAR014G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 5.5e-06 55.8 71 39.4
Atru.chr1.2151 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-06 55.5 114 25.4
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-06 55.5 76 38.2
Aa31LG3G5460 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-06 55.5 120 26.7
Aa31LG5G23530 Aethionema arabicum HOM05D000003 ORTHO05D000006 7.2e-06 55.5 70 35.7
Aa31sc31G40 Aethionema arabicum HOM05D000003 ORTHO05D000411 7.2e-06 55.5 78 37.2
Aa31sc588G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-06 55.5 88 33.0
Aqoxy5G02485 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.2e-06 55.5 102 30.4
Oeu043929.1 Olea europaea HOM05D000003 ORTHO05D000006 7.2e-06 55.5 78 34.6
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.2e-06 55.5 88 35.2
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 7.2e-06 55.5 68 38.2
SHI30807 Sapria himalayana HOM05D000003 ORTHO05D000004 7.2e-06 55.5 50 48.0
SHI43710 Sapria himalayana HOM05D000024 ORTHO05D000006 7.2e-06 55.5 74 36.5
SHI47828 Sapria himalayana HOM05D000024 ORTHO05D000006 7.2e-06 55.5 53 49.1
SHI54733 Sapria himalayana HOM05D000024 ORTHO05D000006 7.2e-06 55.5 50 48.0
SHI54855 Sapria himalayana HOM05D000024 ORTHO05D000006 7.2e-06 55.5 50 48.0
SEGI_18798 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 7.2e-06 55.5 110 28.2
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 7.2e-06 55.5 67 40.3
Aa31LG11G9070 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.4e-06 55.1 86 29.1
Aa31sc160G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.4e-06 55.1 81 30.9
Aa31sc773G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.4e-06 55.1 80 37.5
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 9.4e-06 55.1 86 36.0
SHI20839 Sapria himalayana HOM05D000003 ORTHO05D000004 9.4e-06 55.1 50 48.0
SHI21498 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-06 55.1 50 46.0
SHI35428 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-06 55.1 55 45.5
SHI43597 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-06 55.1 74 36.5
SHI54624 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-06 55.1 50 48.0
SHI54802 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-06 55.1 78 35.9


User provided reference genes

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