Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 3.4e-192 674.9 346 100.0
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 6.9e-129 464.5 358 70.7
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 9.4e-118 427.6 356 65.2
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-116 423.3 426 59.9
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 5.8e-59 232.3 160 76.9
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 1.9e-57 227.3 307 47.9
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-39 167.5 258 45.3
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 2.2e-34 150.6 224 44.6
SGA_v2.0_scaffold53G19291 Striga asiatica HOM05D008413 ORTHO05D000401 4.6e-32 142.9 134 61.9
SGA_v2.0_scaffold90G27895 Striga asiatica HOM05D008413 ORTHO05D000401 7.9e-32 142.1 188 47.3
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-31 141.7 210 41.9
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-31 141.4 210 41.4
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 7.4e-30 135.6 310 35.2
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-29 134.8 210 40.0
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-28 131.0 230 39.1
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-27 127.9 192 41.7
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 1.3e-26 124.8 275 34.2
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 4.6e-24 116.3 165 44.2
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 6.7e-23 112.5 160 43.1
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-22 111.3 212 38.7
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-20 103.6 156 41.0
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 6.9e-20 102.4 140 44.3
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 7.7e-19 99.0 331 29.9
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-18 98.6 196 38.3
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 5.0e-18 96.3 336 29.5
PSO675G5967 Papaver somniferum HOM05D008413 ORTHO05D000401 1.4e-17 94.7 143 42.7
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 1.9e-17 94.4 336 29.2
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 5.5e-17 92.8 142 42.3
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 3.6e-16 90.1 204 32.4
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 3.6e-16 90.1 232 29.7
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 6.1e-16 89.4 197 32.0
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 3.0e-15 87.0 328 29.0
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 3.9e-15 86.7 197 31.5
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-14 85.1 226 30.5
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 4.3e-14 83.2 200 26.5
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.7e-13 80.1 189 27.5
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.8e-13 79.7 189 27.5
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 8.2e-13 79.0 159 34.0
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 1.5e-11 74.7 194 27.8
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.4e-11 73.6 169 33.1
Hund22537 Selenicereus undatus HOM05D000214 ORTHO05D011049 7.7e-11 72.4 192 31.8
SGA_v2.0_scaffold241G44187 Striga asiatica HOM05D008413 ORTHO05D000401 7.7e-11 72.4 88 55.7
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 1.7e-10 71.2 197 27.4
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 1.7e-10 71.2 164 30.5
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 2.9e-10 70.5 197 26.4
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.8e-10 70.1 183 27.9
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 5.0e-10 69.7 235 24.7
CiPaw.05G230600 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.5e-10 69.3 204 28.9
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 6.5e-10 69.3 188 27.7
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.1e-09 68.6 188 27.7
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-09 68.2 180 27.8
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-09 68.2 180 27.8
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.4e-09 68.2 180 26.1
FAN15G0187 Fragaria x ananassa HOM05D001576 ORTHO05D000401 1.9e-09 67.8 188 26.6
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-09 67.4 183 27.3
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 2.5e-09 67.4 262 25.6
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 2.5e-09 67.4 262 25.6
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.5e-09 67.4 170 32.9
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 3.2e-09 67.0 206 24.3
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.2e-09 66.6 183 27.9
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.5e-09 66.2 179 26.8
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.5e-09 66.2 179 26.8
SGA_v2.0_scaffold85G26708 Striga asiatica HOM05D001576 ORTHO05D000401 5.5e-09 66.2 149 30.2
TWI14G0851 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.5e-09 66.2 155 28.4
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.1e-08 64.3 188 27.7
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 3.6e-08 63.5 170 31.2
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 3.6e-08 63.5 151 27.2
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 4.7e-08 63.2 134 27.6
SGA_v2.0_scaffold260G45865 Striga asiatica HOM05D001576 ORTHO05D000401 4.7e-08 63.2 190 25.8
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 7.9e-08 62.4 225 26.7
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 1.0e-07 62.0 190 25.8
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-07 62.0 131 29.8
TWI75G0594 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-07 62.0 198 26.3
CiPaw.09G088900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-07 61.6 152 29.6
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 1.4e-07 61.6 191 25.7
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-07 61.2 132 30.3
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-07 61.2 132 30.3
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-07 61.2 132 30.3
Hund18206 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.8e-07 61.2 196 27.6
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-07 61.2 127 35.4
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-07 60.8 132 30.3
Hund30207 Selenicereus undatus HOM05D000214 ORTHO05D000131 2.3e-07 60.8 194 27.3
Hund30209 Selenicereus undatus HOM05D000214 ORTHO05D000131 2.3e-07 60.8 194 27.3
Atru.chr9.790 Acer truncatum HOM05D001576 ORTHO05D026251 3.0e-07 60.5 182 30.2
BolC3t18868H Brassica oleracea HOM05D001308 ORTHO05D000401 3.0e-07 60.5 228 25.9
Os12g0543800 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.0e-07 60.5 116 32.8
Hund01102 Selenicereus undatus HOM05D018444 ORTHO05D011049 3.0e-07 60.5 149 31.5
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.9e-07 60.1 219 26.0
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.1e-07 59.7 148 25.7
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 5.1e-07 59.7 242 23.1
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 5.1e-07 59.7 242 23.1
Hund04709 Selenicereus undatus HOM05D000214 ORTHO05D011049 5.1e-07 59.7 206 26.7
Hund20929 Selenicereus undatus HOM05D000214 ORTHO05D000131 5.1e-07 59.7 216 26.4
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.7e-07 59.3 155 29.0
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.7e-07 59.3 117 31.6
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 6.7e-07 59.3 251 23.9
Prupe.2G026400 Prunus persica HOM05D001576 ORTHO05D000401 6.7e-07 59.3 128 27.3
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.7e-07 59.3 178 23.0
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.7e-07 59.3 178 23.0
CiPaw.06G027900 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.8e-07 58.9 139 31.7
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 1.1e-06 58.5 197 25.4
CiPaw.11G104100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-06 58.2 138 30.4
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 57.8 115 31.3
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.0e-06 57.8 180 26.1
QL02p057958 Quercus lobata HOM05D001576 ORTHO05D000401 2.0e-06 57.8 207 25.6
Rhsim12G0055400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.0e-06 57.8 154 30.5
CiPaw.05G228800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-06 57.4 139 27.3
SGA_v2.0_scaffold18G08316 Striga asiatica HOM05D008413 ORTHO05D000401 2.6e-06 57.4 80 46.2
BolC1t02183H Brassica oleracea HOM05D000214 ORTHO05D000131 3.3e-06 57.0 162 28.4
BolC5t32685H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-06 57.0 177 28.2
BolC6t38795H Brassica oleracea HOM05D001308 ORTHO05D000401 3.3e-06 57.0 140 26.4
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 3.3e-06 57.0 233 24.0
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-06 56.6 226 24.8
Haze_16101 Corylus avellana HOM05D001576 ORTHO05D000401 4.4e-06 56.6 203 24.6
QL09p033218 Quercus lobata HOM05D001576 ORTHO05D000401 4.4e-06 56.6 188 26.6
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 4.4e-06 56.6 145 31.7
CiPaw.08G047300 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.4e-06 55.8 188 27.1
Hund03592 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.4e-06 55.8 216 25.0
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 9.7e-06 55.5 181 26.0
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 9.7e-06 55.5 224 26.8
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.7e-06 55.5 116 31.0


User provided reference genes

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