Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19820 Striga asiatica HOM05D005925 ORTHO05D007270 4.6e-163 577.8 281 100.0
Migut.N01222 Erythranthe guttata HOM05D005925 ORTHO05D007270 7.1e-132 474.2 281 80.8
MSTRG.27750 Avicennia marina HOM05D005925 ORTHO05D007270 2.8e-128 462.2 281 79.0
SalBow3G3631 Salvia bowleyana HOM05D005925 ORTHO05D007270 4.9e-125 451.4 283 78.8
SalBow1G0951 Salvia bowleyana HOM05D005925 ORTHO05D007270 6.4e-125 451.1 281 78.3
Oeu034077.1 Olea europaea HOM05D005925 ORTHO05D007270 4.6e-123 444.9 281 74.7
HanXRQChr10g0307581 Helianthus annuus HOM05D005925 ORTHO05D007270 1.8e-114 416.4 283 69.3
Cc02_g18140 Coffea canephora HOM05D005925 ORTHO05D007270 5.1e-114 414.8 281 69.4
vmacro22671 Vaccinium macrocarpon HOM05D005925 ORTHO05D007270 2.5e-113 412.5 282 69.5
Rhsim05G0078300 Rhododendron simsii HOM05D005925 ORTHO05D007270 5.7e-113 411.4 282 69.1
Cfa004956 Carpinus fangiana HOM05D005925 ORTHO05D007270 1.3e-112 410.2 282 68.4
CiPaw.05G059200 Carya illinoinensis HOM05D005925 ORTHO05D007270 1.1e-111 407.1 282 67.0
SGA_v2.0_scaffold13G06566 Striga asiatica HOM05D005925 ORTHO05D007270 3.1e-111 405.6 261 76.2
Peaxi162Scf00016g01229 Petunia axillaris HOM05D005925 ORTHO05D007270 4.1e-111 405.2 281 68.3
Duzib248G1621 Durio zibethinus HOM05D005925 ORTHO05D007270 5.3e-111 404.8 282 67.7
Gorai.005G263900 Gossypium raimondii HOM05D005925 ORTHO05D007270 1.2e-110 403.7 282 67.7
Lsat_1_v5_gn_5_117341 Lactuca sativa HOM05D005925 ORTHO05D007270 2.0e-110 402.9 283 68.2
Thecc.02G029300 Theobroma cacao HOM05D005925 ORTHO05D007270 3.4e-110 402.1 282 66.7
Actinidia17837 Actinidia chinensis HOM05D005925 ORTHO05D007270 7.6e-110 401.0 282 67.4
DCAR_003633 Daucus carota HOM05D005925 ORTHO05D007270 7.6e-110 401.0 286 67.1
Gohir.A03G214300 Gossypium hirsutum HOM05D005925 ORTHO05D007270 2.2e-109 399.4 282 67.4
TAR628G0202 Trochodendron aralioides HOM05D005925 ORTHO05D007270 2.9e-109 399.1 282 68.1
Gohir.D02G235800 Gossypium hirsutum HOM05D005925 ORTHO05D007270 3.8e-109 398.7 282 67.0
GSVIVG01031883001 Vitis vinifera HOM05D005925 ORTHO05D007270 3.8e-109 398.7 283 67.8
TWI31G0896 Tripterygium wilfordii HOM05D005925 ORTHO05D007270 8.5e-109 397.5 282 65.2
Manes.17G097200 Manihot esculenta HOM05D005925 ORTHO05D007270 1.4e-108 396.7 282 65.6
Solyc01g109130.3 Solanum lycopersicum HOM05D005925 ORTHO05D007270 3.2e-108 395.6 281 66.5
Sopen01g051330 Solanum pennellii HOM05D005925 ORTHO05D007270 3.2e-108 395.6 281 66.5
Sc14g0001730 Simmondsia chinensis HOM05D005925 ORTHO05D007270 7.2e-108 394.4 283 66.1
QL11p039405 Quercus lobata HOM05D005925 ORTHO05D007270 9.3e-108 394.0 280 65.0
CAN.G322.90 Capsicum annuum HOM05D005925 ORTHO05D007270 2.1e-107 392.9 281 66.5
Nitab4.5_0012894g0020 Nicotiana tabacum HOM05D005925 ORTHO05D007270 4.6e-107 391.7 291 66.7
PGR142G0964 Punica granatum HOM05D005925 ORTHO05D007270 4.6e-107 391.7 282 66.0
FvH4_5g27360 Fragaria vesca HOM05D005925 ORTHO05D007270 7.9e-107 391.0 283 65.0
ECA234G0394 Erigeron canadensis HOM05D005925 ORTHO05D000001 8.7e-106 387.5 272 66.2
Carub.0003s1876 Capsella rubella HOM05D005925 ORTHO05D007270 5.7e-105 384.8 282 66.3
Ciclev10029009m.g Citrus clementina HOM05D005925 ORTHO05D007270 5.7e-105 384.8 282 65.6
PGSC0003DMG400025833 Solanum tuberosum HOM05D005925 ORTHO05D007270 9.7e-105 384.0 281 65.8
unitig_8.g3429 Utricularia gibba HOM05D005925 ORTHO05D007270 1.6e-104 383.3 261 69.7
Prupe.8G110200 Prunus persica HOM05D005925 ORTHO05D007270 2.2e-104 382.9 283 64.0
A05p30640 Brassica napus HOM05D005925 ORTHO05D007270 6.3e-104 381.3 282 65.2
Potri.004G148500 Populus trichocarpa HOM05D005925 ORTHO05D007270 6.3e-104 381.3 282 64.2
Potri.004G148700 Populus trichocarpa HOM05D005925 ORTHO05D007270 6.3e-104 381.3 282 64.2
RcHm_v2.0_Chr6g0261021 Rosa chinensis HOM05D005925 ORTHO05D007270 6.3e-104 381.3 283 64.3
Thhalv10021280m.g Eutrema salsugineum HOM05D005925 ORTHO05D007270 8.2e-104 380.9 282 65.2
FAN08G3356 Fragaria x ananassa HOM05D005925 ORTHO05D007270 1.8e-103 379.8 294 61.9
Eucgr.I01229 Eucalyptus grandis HOM05D005925 ORTHO05D007270 2.4e-103 379.4 282 63.8
MD10G1085900 Malus domestica HOM05D005925 ORTHO05D007270 3.1e-103 379.0 283 63.3
ClCG02G005470 Citrullus lanatus HOM05D005925 ORTHO05D007270 4.1e-103 378.6 290 62.8
PSO170G4903 Papaver somniferum HOM05D005925 ORTHO05D007270 4.1e-103 378.6 284 62.7
Sp3g17030 Schrenkiella parvula HOM05D005925 ORTHO05D007270 4.1e-103 378.6 282 64.9
FAN04G2258 Fragaria x ananassa HOM05D005925 ORTHO05D007270 2.0e-102 376.3 294 61.2
PSO700G0338 Papaver somniferum HOM05D005925 ORTHO05D007270 3.4e-102 375.6 284 62.3
AL3G32330 Arabidopsis lyrata HOM05D005925 ORTHO05D007270 4.5e-102 375.2 282 64.5
AT3G18940 Arabidopsis thaliana HOM05D005925 ORTHO05D007270 4.5e-102 375.2 282 63.8
CARHR094360 Cardamine hirsuta HOM05D005925 ORTHO05D007270 7.7e-102 374.4 282 63.8
Lj3g0007485 Lotus japonicus HOM05D005925 ORTHO05D007270 7.7e-102 374.4 283 64.0
BcaB06g25946 Brassica carinata HOM05D005925 ORTHO05D007270 2.2e-101 372.9 282 64.2
CANSAT25G2034 Cannabis sativa HOM05D005925 ORTHO05D007270 2.2e-101 372.9 284 62.0
Glyma.11G122900 Glycine max HOM05D005925 ORTHO05D007270 2.2e-101 372.9 283 64.7
Hund00298 Selenicereus undatus HOM05D005925 ORTHO05D007270 2.2e-101 372.9 283 61.5
Hund00305 Selenicereus undatus HOM05D005925 ORTHO05D007270 2.2e-101 372.9 283 61.5
C05p46520 Brassica napus HOM05D005925 ORTHO05D007270 5.0e-101 371.7 282 64.2
Lalb_Chr01g0002931 Lupinus albus HOM05D005925 ORTHO05D007270 5.0e-101 371.7 282 63.8
Medtr4g068475 Medicago truncatula HOM05D005925 ORTHO05D007270 5.0e-101 371.7 282 63.8
MELO3C018414.2 Cucumis melo HOM05D005925 ORTHO05D007270 6.5e-101 371.3 282 62.4
Aqoxy5G01754 Aquilegia oxysepala HOM05D005925 ORTHO05D007270 1.1e-100 370.5 281 63.7
CsaV3_7G010150 Cucumis sativus L. HOM05D005925 ORTHO05D007270 1.1e-100 370.5 282 62.8
VMungo1127G2028 Vigna mungo HOM05D005925 ORTHO05D007270 1.1e-100 370.5 283 64.0
COL.COLO4_17783 Corchorus olitorius HOM05D005925 ORTHO05D007270 1.4e-100 370.2 262 66.0
Aa31LG8G5780 Aethionema arabicum HOM05D005925 ORTHO05D007270 2.5e-100 369.4 282 64.5
A03p40910 Brassica napus HOM05D005925 ORTHO05D007270 2.5e-100 369.4 283 63.3
BraA03t13250Z Brassica rapa HOM05D005925 ORTHO05D007270 2.5e-100 369.4 283 63.3
Glyma.12G047700 Glycine max HOM05D005925 ORTHO05D007270 2.5e-100 369.4 283 64.0
TPR.G10224 Trifolium pratense HOM05D005925 ORTHO05D007270 3.2e-100 369.0 282 63.8
Phvul.011G049700 Phaseolus vulgaris HOM05D005925 ORTHO05D007270 4.2e-100 368.6 283 64.0
Sed0018300 Sechium edule HOM05D005925 ORTHO05D007270 1.2e-99 367.1 282 62.8
Ca_20823_v3 Cicer arietinum L. HOM05D005925 ORTHO05D007270 2.1e-99 366.3 283 63.3
arahy.Tifrunner.gnm1.ann1.JZQ5CR Arachis hypogaea HOM05D005925 ORTHO05D007270 4.6e-99 365.2 283 62.2
THA.LOC104803449 Tarenaya hassleriana HOM05D005925 ORTHO05D007270 7.9e-99 364.4 282 61.3
QL09p038983 Quercus lobata HOM05D005925 ORTHO05D007270 3.0e-98 362.5 260 64.6
Lj9C365T5 Lonicera japonica HOM05D005925 ORTHO05D007270 5.1e-98 361.7 254 67.3
Ah.01g019810 Amaranthus hybridus HOM05D005925 ORTHO05D007270 1.5e-97 360.1 282 59.9
Psat7g207080 Pisum sativum HOM05D005925 ORTHO05D007270 2.0e-97 359.8 283 63.6
MBI16_g31334_MAGBIO Magnolia biondii HOM05D005925 ORTHO05D007270 2.2e-96 356.3 321 57.9
arahy.Tifrunner.gnm1.ann1.EU6551 Arachis hypogaea HOM05D005925 ORTHO05D007270 2.8e-96 355.9 283 60.8
CDE01G0621 Ceratophyllum demersum HOM05D005925 ORTHO05D007270 2.8e-96 355.9 281 63.0
Hma1.2p1_0584F.1_g183295 Hydrangea macrophylla HOM05D005925 ORTHO05D007270 6.3e-96 354.8 248 68.1
ATR0733G151 Amborella trichopoda HOM05D005925 ORTHO05D007270 3.1e-95 352.4 283 59.7
EL10Ac9g21785 Beta vulgaris HOM05D005925 ORTHO05D007270 5.3e-95 351.7 262 64.9
Sabra04G0098600 Salix brachista HOM05D005925 ORTHO05D007270 4.2e-92 342.0 352 50.9
Nn6g32156 Nelumbo nucifera HOM05D005925 ORTHO05D007270 1.0e-90 337.4 256 62.9
FAN13G1680 Fragaria x ananassa HOM05D005925 ORTHO05D007270 1.8e-90 336.7 266 62.4
Haze_02451 Corylus avellana HOM05D005925 ORTHO05D007270 1.1e-89 334.0 271 62.4
AUR62011394 Chenopodium quinoa HOM05D005925 ORTHO05D007270 1.5e-89 333.6 250 64.4
Os03g0766900 Oryza sativa ssp. japonica HOM05D005925 ORTHO05D007270 3.3e-89 332.4 282 56.7
Actinidia27921 Actinidia chinensis HOM05D005925 ORTHO05D007270 2.0e-86 323.2 281 60.1
BcaC01g03666 Brassica carinata HOM05D005925 ORTHO05D007270 2.2e-85 319.7 280 58.6
Nitab4.5_0008189g0020 Nicotiana tabacum HOM05D005925 ORTHO05D007270 3.8e-85 318.9 287 56.8
BcaB04g19013 Brassica carinata HOM05D005925 ORTHO05D007270 3.2e-84 315.8 263 60.8
C03p49920 Brassica napus HOM05D005925 ORTHO05D007270 3.2e-84 315.8 255 62.0
BolC3t17285H Brassica oleracea HOM05D005925 ORTHO05D007270 3.2e-84 315.8 255 62.0
Zm00001eb058630 Zea mays HOM05D005925 ORTHO05D007270 2.1e-83 313.2 262 58.0
FAN18G1621 Fragaria x ananassa HOM05D005925 ORTHO05D007270 6.7e-82 308.1 255 60.4
RcHm_v2.0_Chr6g0260971 Rosa chinensis HOM05D005925 ORTHO05D007270 3.7e-80 302.4 283 55.1
Dinv23574 Davidia involucrata HOM05D005925 ORTHO05D007270 3.2e-76 289.3 207 65.7
FvH4_2g07422 Fragaria vesca HOM05D005925 ORTHO05D007270 4.7e-75 285.4 251 57.8
HPP92_015723 Vanilla planifolia HOM05D005925 ORTHO05D007270 3.2e-68 262.7 217 59.9
Pp3c2_22470 Physcomitrium patens HOM05D005925 ORTHO05D007270 8.0e-67 258.1 278 48.9
Pp3c2_22478 Physcomitrium patens HOM05D005925 ORTHO05D007270 8.0e-67 258.1 278 48.9
Cpa.g.sc62.88 Carica papaya HOM05D005925 ORTHO05D007270 3.1e-63 246.1 187 59.4
FAN15G3711 Fragaria x ananassa HOM05D001143 ORTHO05D001457 4.1e-63 245.7 192 60.9
Mapoly0073s0081 Marchantia polymorpha HOM05D005925 ORTHO05D007270 4.4e-57 225.7 281 44.5
SMO115G0205 Selaginella moellendorffii HOM05D005925 ORTHO05D007270 1.8e-55 220.3 276 41.7
FAN24G2811 Fragaria x ananassa HOM05D001143 ORTHO05D007270 7.3e-52 208.4 215 52.1
Atru.chr5.2901 Acer truncatum HOM05D005925 ORTHO05D007270 1.1e-50 204.5 134 73.9
BolC5t33380H Brassica oleracea HOM05D005925 ORTHO05D007270 1.9e-47 193.7 134 70.9
BraA05t21906Z Brassica rapa HOM05D005925 ORTHO05D007270 4.1e-47 192.6 134 70.9
Haze_02453 Corylus avellana HOM05D005925 ORTHO05D007270 5.0e-45 185.7 182 53.8
CBR_g26043 Chara braunii HOM05D005925 ORTHO05D007270 5.4e-39 165.6 359 31.5
SEGI_41274 Sequoiadendron giganteum HOM05D005925 ORTHO05D007270 2.3e-37 160.2 152 50.7
AagrBONN_evm.TU.Sc2ySwM_228.3883 Anthoceros agrestis HOM05D005925 ORTHO05D007270 3.6e-35 152.9 183 43.2
Atru.chr5.2902 Acer truncatum HOM05D005925 ORTHO05D007270 1.9e-31 140.6 93 66.7
FvH4_5g16250 Fragaria vesca HOM05D005925 ORTHO05D007270 8.7e-29 131.7 95 65.3
SEGI_01484 Sequoiadendron giganteum HOM05D005925 ORTHO05D007270 1.1e-28 131.3 96 68.8
RcHm_v2.0_Chr7g0218511 Rosa chinensis HOM05D005925 ORTHO05D007270 4.3e-28 129.4 202 39.1
SMO115G0183 Selaginella moellendorffii HOM05D005925 ORTHO05D007270 1.1e-23 114.8 156 38.5
FAN18G0119 Fragaria x ananassa HOM05D005925 ORTHO05D007270 7.1e-23 112.1 86 62.8
MCO11G864 Micromonas commoda HOM05D005925 ORTHO05D007270 1.2e-22 111.3 301 29.2
CDE02G0959 Ceratophyllum demersum HOM05D007402 ORTHO05D003673 1.5e-20 104.4 120 51.7
FAN20G1704 Fragaria x ananassa HOM05D005925 ORTHO05D007270 9.0e-18 95.1 67 59.7
Cre09.g399589 Chlamydomonas reinhardtii HOM05D005925 ORTHO05D007270 2.0e-09 67.4 260 25.4
BcaB04g20743 Brassica carinata HOM05D005925 ORTHO05D007270 9.3e-07 58.5 46 54.3


User provided reference genes

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