Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 2.8e-49 200.3 99 100.0
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 2.4e-16 90.9 84 51.2
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 6.6e-14 82.8 99 47.5
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.1e-12 77.8 86 44.2
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 2.8e-12 77.4 88 46.6
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.7e-12 76.6 96 40.6
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.7e-12 76.6 96 40.6
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 8.0e-12 75.9 96 40.6
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.1e-11 75.5 86 43.0
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.4e-11 75.1 105 40.0
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.1e-11 73.9 96 38.5
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 5.2e-11 73.2 105 40.0
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 8.9e-11 72.4 99 41.4
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 8.9e-11 72.4 96 38.5
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.6e-10 70.9 94 40.4
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 3.4e-10 70.5 96 40.6
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 4.4e-10 70.1 118 33.9
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 4.4e-10 70.1 86 40.7
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 5.8e-10 69.7 94 38.3
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 9.8e-10 68.9 95 46.3
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.7e-09 68.2 88 36.4
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 2.2e-09 67.8 86 34.9
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 2.2e-09 67.8 84 41.7
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 2.9e-09 67.4 96 34.4
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 8.3e-09 65.9 96 36.5
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.1e-08 65.5 96 38.5
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.1e-08 65.5 84 36.9
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.4e-08 65.1 86 39.5
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.4e-08 64.3 90 42.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-08 63.9 83 39.8
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.2e-08 63.9 86 41.9
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 4.1e-08 63.5 90 42.2
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 5.4e-08 63.2 83 37.3
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 5.4e-08 63.2 90 40.0
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 5.4e-08 63.2 86 39.5
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 9.2e-08 62.4 103 33.0
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.2e-08 62.4 88 38.6
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 1.2e-07 62.0 101 39.6
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.2e-07 62.0 83 43.4
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 1.2e-07 62.0 99 34.3
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.2e-07 62.0 93 35.5
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.2e-07 62.0 87 39.1
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.6e-07 61.6 90 34.4
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.6e-07 61.6 85 42.4
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.0e-07 61.2 115 30.4
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 2.7e-07 60.8 89 39.3
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 2.7e-07 60.8 102 34.3
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.6e-07 60.1 75 42.7
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 4.6e-07 60.1 97 33.0
TPR.G24483 Trifolium pratense HOM05D010359 ORTHO05D002252 4.6e-07 60.1 88 37.5
Migut.N01232 Erythranthe guttata HOM05D007556 ORTHO05D002252 7.8e-07 59.3 98 42.9
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.0e-06 58.9 91 39.6
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 1.0e-06 58.9 95 37.9
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 1.7e-06 58.2 97 29.9
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.0e-06 57.4 94 36.2
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 5.0e-06 56.6 87 34.5
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 6.6e-06 56.2 97 34.0
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 6.6e-06 56.2 93 36.6
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 6.6e-06 56.2 91 35.2
TPR.G38150 Trifolium pratense HOM05D010359 ORTHO05D002252 8.6e-06 55.8 99 37.4


User provided reference genes

Program Settings