Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19790 Striga asiatica HOM05D030986 ORTHO05D000013 1.3e-73 279.6 139 100.0
SGA_v2.0_scaffold56G20047 Striga asiatica HOM05D030986 ORTHO05D399612 3.8e-54 214.9 120 93.3
SGA_v2.0_scaffold27G11597 Striga asiatica HOM05D030986 ORTHO05D406172 1.9e-53 212.6 120 90.8
SGA_v2.0_scaffold39G15350 Striga asiatica HOM05D030986 ORTHO05D000013 1.5e-42 176.4 135 70.4
SGA_v2.0_scaffold23G10088 Striga asiatica HOM05D029805 ORTHO05D000013 2.3e-14 82.8 94 47.9
SGA_v2.0_scaffold77G25226 Striga asiatica HOM05D017527 ORTHO05D000013 2.5e-13 79.3 149 38.3
SGA_v2.0_scaffold157G37386 Striga asiatica HOM05D057427 ORTHO05D000013 2.8e-12 75.9 119 42.0
SGA_v2.0_scaffold228G43261 Striga asiatica HOM05D017547 ORTHO05D006664 3.6e-12 75.5 79 46.8
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 7.1e-08 61.2 80 43.8
SGA_v2.0_scaffold10G05288 Striga asiatica HOM05D017547 ORTHO05D014211 9.3e-08 60.8 68 48.5
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-07 60.1 82 39.0
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-07 59.3 80 43.8
Rhsim04G0159500 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.0e-07 58.2 107 32.7
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.9e-07 57.8 109 36.7
Rhsim08G0011600 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.9e-07 57.8 82 39.0
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 1.7e-06 56.6 117 29.1
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-06 56.2 78 39.7
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-06 56.2 80 42.5
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 56.2 80 42.5
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 56.2 80 42.5
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 56.2 80 42.5
Rhsim04G0080300 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.0e-06 55.8 87 39.1
PGSC0003DMG400013047 Solanum tuberosum HOM05D000017 ORTHO05D000013 3.9e-06 55.5 80 41.2
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 5.1e-06 55.1 80 41.2
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-06 54.3 80 40.0


User provided reference genes

Program Settings