Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 2.1e-49 198.7 102 100.0
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 1.1e-45 186.4 102 94.1
SGA_v2.0_scaffold46G17378 Striga asiatica HOM05D007326 ORTHO05D009048 1.0e-32 143.3 95 82.1
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 3.0e-24 115.2 108 63.0
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 1.0e-19 100.1 108 57.4
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 7.3e-18 94.0 110 51.8
Migut.F01037 Erythranthe guttata HOM05D007326 ORTHO05D009048 8.3e-14 80.5 98 54.1
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 1.8e-13 79.3 97 45.4
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 5.4e-13 77.8 88 50.0
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 9.2e-13 77.0 122 41.8
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 3.5e-12 75.1 83 47.0
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 3.5e-12 75.1 80 51.2
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 4.6e-12 74.7 88 47.7
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 1.0e-11 73.6 101 45.5
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.0e-11 73.6 84 53.6
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.0e-11 73.6 84 53.6
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 1.0e-11 73.6 84 53.6
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 1.3e-11 73.2 95 49.5
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 1.3e-11 73.2 102 43.1
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 1.7e-11 72.8 39 79.5
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 5.0e-11 71.2 118 41.5
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 5.0e-11 71.2 121 42.1
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 5.0e-11 71.2 87 48.3
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 6.6e-11 70.9 58 60.3
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 8.6e-11 70.5 91 45.1
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 1.5e-10 69.7 83 48.2
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 1.5e-10 69.7 105 41.0
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 1.9e-10 69.3 86 50.0
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 2.5e-10 68.9 85 47.1
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 3.3e-10 68.6 65 55.4
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 3.3e-10 68.6 97 43.3
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 3.3e-10 68.6 36 80.6
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 4.3e-10 68.2 89 46.1
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 4.3e-10 68.2 39 79.5
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 5.6e-10 67.8 34 82.4
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 9.5e-10 67.0 34 82.4
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 9.5e-10 67.0 34 82.4
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 9.5e-10 67.0 84 46.4
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 1.2e-09 66.6 89 44.9
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 1.2e-09 66.6 94 40.4
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.2e-09 66.6 36 80.6
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 1.2e-09 66.6 32 84.4
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.2e-09 66.6 89 46.1
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 1.2e-09 66.6 85 45.9
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 1.6e-09 66.2 122 40.2
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 1.6e-09 66.2 88 44.3
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 1.6e-09 66.2 37 75.7
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 2.1e-09 65.9 32 81.2
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 2.1e-09 65.9 36 80.6
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 2.8e-09 65.5 58 56.9
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 2.8e-09 65.5 34 79.4
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 2.8e-09 65.5 34 79.4
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 2.8e-09 65.5 34 79.4
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 2.8e-09 65.5 34 79.4
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 2.8e-09 65.5 117 41.9
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 3.6e-09 65.1 34 79.4
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 4.7e-09 64.7 86 48.8
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 4.7e-09 64.7 84 44.0
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 6.2e-09 64.3 96 41.7
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 6.2e-09 64.3 69 53.6
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 6.2e-09 64.3 36 77.8
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 6.2e-09 64.3 70 50.0
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 8.0e-09 63.9 64 50.0
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 8.0e-09 63.9 96 41.7
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 8.0e-09 63.9 101 40.6
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 1.1e-08 63.5 90 41.1
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 1.1e-08 63.5 93 41.9
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.1e-08 63.5 39 76.9
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 1.4e-08 63.2 30 83.3
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 1.8e-08 62.8 100 43.0
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 2.3e-08 62.4 41 68.3
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 2.3e-08 62.4 62 56.5
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 3.1e-08 62.0 120 44.2
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 4.0e-08 61.6 65 52.3
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 5.2e-08 61.2 65 52.3
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 5.2e-08 61.2 118 40.7
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 5.2e-08 61.2 93 43.0
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 6.8e-08 60.8 42 69.0
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 6.8e-08 60.8 101 38.6
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 8.9e-08 60.5 93 41.9
Cre02.g073800 Chlamydomonas reinhardtii HOM05D007326 ORTHO05D009048 8.9e-08 60.5 41 63.4
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 8.9e-08 60.5 113 38.9
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 1.5e-07 59.7 88 44.3
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 2.6e-07 58.9 111 38.7
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 2.6e-07 58.9 101 39.6
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 2.6e-07 58.9 100 44.0
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 3.4e-07 58.5 113 37.2
FvH4_7g31800 Fragaria vesca HOM05D000354 ORTHO05D000717 3.4e-07 58.5 47 59.6
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 3.4e-07 58.5 89 44.9
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 4.4e-07 58.2 67 49.3
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 4.4e-07 58.2 67 49.3
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 5.8e-07 57.8 65 49.2
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 5.8e-07 57.8 65 49.2
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 5.8e-07 57.8 99 39.4
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 9.8e-07 57.0 43 65.1
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 1.3e-06 56.6 115 39.1
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 2.2e-06 55.8 112 36.6
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 2.9e-06 55.5 118 37.3
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 3.7e-06 55.1 113 38.1
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 4.9e-06 54.7 115 35.7
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.9e-06 54.7 111 36.9


User provided reference genes

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