Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19717 Striga asiatica HOM05D000476 ORTHO05D028872 3.8e-73 278.1 144 100.0
SGA_v2.0_scaffold58G20351 Striga asiatica HOM05D000476 ORTHO05D005719 2.4e-43 179.1 108 88.9
SGA_v2.0_scaffold241G44210 Striga asiatica HOM05D000476 ORTHO05D028872 5.0e-41 171.4 107 83.2
Migut.B00063 Erythranthe guttata HOM05D000476 ORTHO05D005719 1.7e-28 129.8 105 66.7
CSS0012841 Camellia sinensis var. sinensis HOM05D000476 ORTHO05D005719 5.4e-27 124.8 104 65.4
unitig_0.g814 Utricularia gibba HOM05D000476 ORTHO05D005719 3.0e-25 119.0 109 61.5
Dinv41922 Davidia involucrata HOM05D000476 ORTHO05D005719 5.1e-25 118.2 119 59.7
Hma1.2p1_0163F.1_g072630 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 1.1e-24 117.1 119 59.7
MSTRG.16926 Avicennia marina HOM05D000476 ORTHO05D005719 1.9e-24 116.3 104 62.5
Peaxi162Scf00362g00535 Petunia axillaris HOM05D000476 ORTHO05D005719 1.9e-24 116.3 121 56.2
Cc09_g10250 Coffea canephora HOM05D000476 ORTHO05D005719 2.5e-24 115.9 119 58.0
Eucgr.I01453 Eucalyptus grandis HOM05D000476 ORTHO05D005719 3.3e-24 115.5 123 55.3
SalBow1G8296 Salvia bowleyana HOM05D000476 ORTHO05D005719 9.6e-24 114.0 93 67.7
Solyc01g111740.3 Solanum lycopersicum HOM05D000476 ORTHO05D005719 9.6e-24 114.0 111 55.9
Actinidia20522 Actinidia chinensis HOM05D000476 ORTHO05D005719 1.2e-23 113.6 101 61.4
Sopen01g053780 Solanum pennellii HOM05D000476 ORTHO05D005719 1.6e-23 113.2 111 55.9
PGSC0003DMG400018042 Solanum tuberosum HOM05D000476 ORTHO05D005719 2.1e-23 112.8 111 56.8
Gohir.A01G170100 Gossypium hirsutum HOM05D000476 ORTHO05D005719 3.6e-23 112.1 125 53.6
Gorai.002G199800 Gossypium raimondii HOM05D000476 ORTHO05D005719 3.6e-23 112.1 119 54.6
Oeu029648.1 Olea europaea HOM05D000476 ORTHO05D005719 4.7e-23 111.7 99 60.6
Nitab4.5_0004864g0010 Nicotiana tabacum HOM05D000476 ORTHO05D005719 8.1e-23 110.9 104 59.6
Rhsim11G0193200 Rhododendron simsii HOM05D000476 ORTHO05D005719 8.1e-23 110.9 98 64.3
Gohir.D01G161200 Gossypium hirsutum HOM05D000476 ORTHO05D005719 1.4e-22 110.2 119 53.8
Nitab4.5_0003698g0070 Nicotiana tabacum HOM05D000476 ORTHO05D005719 1.4e-22 110.2 110 56.4
vmacro02286 Vaccinium macrocarpon HOM05D000476 ORTHO05D005719 1.8e-22 109.8 98 63.3
Dinv14122 Davidia involucrata HOM05D000476 ORTHO05D005719 2.4e-22 109.4 100 61.0
Thecc.02G056200 Theobroma cacao HOM05D000476 ORTHO05D005719 5.2e-22 108.2 121 50.4
SGA_v2.0_scaffold143G35761 Striga asiatica HOM05D000476 ORTHO05D028872 9.0e-22 107.5 82 73.2
ClCG02G012060 Citrullus lanatus HOM05D000476 ORTHO05D005719 1.2e-21 107.1 104 58.7
CAN.G588.95 Capsicum annuum HOM05D000476 ORTHO05D005719 1.5e-21 106.7 94 62.8
Lj9A397G33 Lonicera japonica HOM05D000476 ORTHO05D005719 1.5e-21 106.7 117 53.8
Manes.04G071400 Manihot esculenta HOM05D000476 ORTHO05D005719 1.5e-21 106.7 103 57.3
Potri.004G177200 Populus trichocarpa HOM05D000476 ORTHO05D005719 1.5e-21 106.7 102 57.8
Actinidia18045 Actinidia chinensis HOM05D000476 ORTHO05D005719 2.0e-21 106.3 104 58.7
Sabra04G0119100 Salix brachista HOM05D000476 ORTHO05D005719 2.0e-21 106.3 102 58.8
MELO3C020830.2 Cucumis melo HOM05D000476 ORTHO05D005719 2.6e-21 105.9 100 59.0
Lsat_1_v5_gn_4_71841 Lactuca sativa HOM05D000476 ORTHO05D005719 2.6e-21 105.9 92 64.1
Lj9C400T3 Lonicera japonica HOM05D000476 ORTHO05D005719 4.4e-21 105.1 117 53.0
Haze_02112 Corylus avellana HOM05D000476 ORTHO05D005719 5.8e-21 104.8 109 56.9
CsaV3_2G016220 Cucumis sativus L. HOM05D000476 ORTHO05D005719 5.8e-21 104.8 101 59.4
Duzib248G0030 Durio zibethinus HOM05D000476 ORTHO05D005719 9.9e-21 104.0 121 49.6
THA.LOC104804321 Tarenaya hassleriana HOM05D000476 ORTHO05D005719 1.3e-20 103.6 108 57.4
Ciclev10030360m.g Citrus clementina HOM05D000476 ORTHO05D005719 3.8e-20 102.1 122 47.5
QL11p051500 Quercus lobata HOM05D000476 ORTHO05D005719 3.8e-20 102.1 106 55.7
Psat6g232560 Pisum sativum HOM05D000476 ORTHO05D005719 4.9e-20 101.7 115 53.0
Sc18g0006370 Simmondsia chinensis HOM05D000476 ORTHO05D005719 4.9e-20 101.7 103 59.2
Aqoxy5G01114 Aquilegia oxysepala HOM05D000476 ORTHO05D005719 6.4e-20 101.3 114 51.8
Cfa005281 Carpinus fangiana HOM05D000476 ORTHO05D005719 8.4e-20 100.9 108 55.6
Sed0002256 Sechium edule HOM05D000476 ORTHO05D005719 8.4e-20 100.9 100 59.0
TWI75G0421 Tripterygium wilfordii HOM05D000476 ORTHO05D005719 8.4e-20 100.9 112 52.7
Duzib132G1235 Durio zibethinus HOM05D000476 ORTHO05D005719 1.9e-19 99.8 116 52.6
CANSAT25G2378 Cannabis sativa HOM05D000476 ORTHO05D005719 3.2e-19 99.0 107 54.2
TAR381G1633 Trochodendron aralioides HOM05D000476 ORTHO05D005719 3.2e-19 99.0 105 55.2
Glyma.20G106700 Glycine max HOM05D000476 ORTHO05D005719 4.2e-19 98.6 116 51.7
VMungo0720G1528 Vigna mungo HOM05D000476 ORTHO05D005719 4.2e-19 98.6 112 54.5
TAR381G1494 Trochodendron aralioides HOM05D000476 ORTHO05D005719 7.1e-19 97.8 102 55.9
Cpa.g.sc20.106 Carica papaya HOM05D000476 ORTHO05D005719 9.3e-19 97.4 102 53.9
Phvul.007G018200 Phaseolus vulgaris HOM05D000476 ORTHO05D005719 9.3e-19 97.4 112 52.7
Sabra09G0106700 Salix brachista HOM05D000476 ORTHO05D005719 9.3e-19 97.4 110 54.5
Medtr1g112850 Medicago truncatula HOM05D000476 ORTHO05D005719 1.2e-18 97.1 123 48.8
TWI31G0618 Tripterygium wilfordii HOM05D000476 ORTHO05D005719 1.2e-18 97.1 101 54.5
HanXRQChr10g0300811 Helianthus annuus HOM05D000476 ORTHO05D005719 1.6e-18 96.7 92 59.8
Sed0017619 Sechium edule HOM05D000476 ORTHO05D005719 1.6e-18 96.7 99 57.6
Potri.009G137500 Populus trichocarpa HOM05D000476 ORTHO05D005719 2.1e-18 96.3 111 55.0
FvH4_2g15580 Fragaria vesca HOM05D000476 ORTHO05D005719 2.7e-18 95.9 132 43.2
FAN24G1070 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.7e-18 95.9 132 43.2
Ca_03300_v3 Cicer arietinum L. HOM05D000476 ORTHO05D005719 6.0e-18 94.7 110 50.0
Lj5g0010360 Lotus japonicus HOM05D000476 ORTHO05D005719 1.0e-17 94.0 109 50.5
Ca_11939_v3 Cicer arietinum L. HOM05D000476 ORTHO05D028872 1.3e-17 93.6 111 51.4
Ah.01g008190 Amaranthus hybridus HOM05D000476 ORTHO05D005719 1.7e-17 93.2 130 46.9
DCAR_022959 Daucus carota HOM05D000476 ORTHO05D005719 1.7e-17 93.2 109 51.4
TPR.G2472 Trifolium pratense HOM05D000476 ORTHO05D005719 1.7e-17 93.2 133 45.9
GSVIVG01005188001 Vitis vinifera HOM05D000476 ORTHO05D005719 1.7e-17 93.2 95 54.7
GSVIVG01006889001 Vitis vinifera HOM05D000476 ORTHO05D005719 1.7e-17 93.2 95 54.7
EL10Ac9g21346 Beta vulgaris HOM05D000476 ORTHO05D005719 3.0e-17 92.4 106 53.8
FAN20G0044 Fragaria x ananassa HOM05D000476 ORTHO05D005719 5.1e-17 91.7 102 49.0
GSVIVG01023992001 Vitis vinifera HOM05D000476 ORTHO05D005719 6.6e-17 91.3 93 58.1
ECA234G3651 Erigeron canadensis HOM05D000476 ORTHO05D005719 8.7e-17 90.9 102 52.9
COL.COLO4_22490 Corchorus olitorius HOM05D000476 ORTHO05D005719 1.1e-16 90.5 90 56.7
RcHm_v2.0_Chr6g0278761 Rosa chinensis HOM05D000476 ORTHO05D005719 1.1e-16 90.5 106 48.1
Thecc.01G012000 Theobroma cacao HOM05D000476 ORTHO05D005719 1.5e-16 90.1 97 54.6
FvH4_1g11140 Fragaria vesca HOM05D000476 ORTHO05D005719 1.9e-16 89.7 86 60.5
FAN19G2503 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.9e-16 89.7 86 60.5
FAN23G2355 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.9e-16 89.7 86 60.5
FAN26G0730 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.9e-16 89.7 86 60.5
Lalb_Chr21g0307031 Lupinus albus HOM05D000476 ORTHO05D005719 2.5e-16 89.4 112 48.2
Nn6g31926 Nelumbo nucifera HOM05D000476 ORTHO05D005719 2.5e-16 89.4 113 49.6
PSO210G5945 Papaver somniferum HOM05D000476 ORTHO05D005719 2.5e-16 89.4 109 50.5
Glyma.10G283000 Glycine max HOM05D000476 ORTHO05D005719 3.3e-16 89.0 104 52.9
Duzib147G1555 Durio zibethinus HOM05D000476 ORTHO05D005719 4.3e-16 88.6 96 53.1
arahy.Tifrunner.gnm1.ann1.5E9YX9 Arachis hypogaea HOM05D000476 ORTHO05D005719 5.6e-16 88.2 120 45.8
FAN28G1417 Fragaria x ananassa HOM05D000476 ORTHO05D005719 7.3e-16 87.8 86 59.3
Hund06447 Selenicereus undatus HOM05D000476 ORTHO05D005719 7.3e-16 87.8 113 49.6
Ah.01g023180 Amaranthus hybridus HOM05D000476 ORTHO05D005719 9.6e-16 87.4 92 54.3
MD05G1124400 Malus domestica HOM05D000476 ORTHO05D005719 9.6e-16 87.4 107 47.7
FAN27G1175 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.3e-15 87.0 122 42.6
Dinv40142 Davidia involucrata HOM05D000476 ORTHO05D005719 2.1e-15 86.3 104 53.8
Gohir.A02G173900 Gossypium hirsutum HOM05D000476 ORTHO05D005719 2.1e-15 86.3 97 52.6
PGR142G3087 Punica granatum HOM05D000476 ORTHO05D005719 2.1e-15 86.3 89 55.1
FAN15G2981 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.8e-15 85.9 101 48.5
MD10G1127200 Malus domestica HOM05D000476 ORTHO05D005719 3.6e-15 85.5 118 44.9
arahy.Tifrunner.gnm1.ann1.FXE6P8 Arachis hypogaea HOM05D000476 ORTHO05D005719 4.8e-15 85.1 122 46.7
COL.COLO4_17370 Corchorus olitorius HOM05D000476 ORTHO05D005719 4.8e-15 85.1 65 69.2
Prupe.8G168100 Prunus persica HOM05D000476 ORTHO05D005719 4.8e-15 85.1 97 48.5
PSO170G5898 Papaver somniferum HOM05D000476 ORTHO05D005719 6.2e-15 84.7 100 51.0
Prupe.7G174500 Prunus persica HOM05D000476 ORTHO05D005719 6.2e-15 84.7 116 45.7
RcHm_v2.0_Chr2g0098421 Rosa chinensis HOM05D000476 ORTHO05D005719 1.1e-14 84.0 101 52.5
QL06p051967 Quercus lobata HOM05D000476 ORTHO05D005719 1.4e-14 83.6 96 53.1
Gohir.D03G005900 Gossypium hirsutum HOM05D000476 ORTHO05D005719 2.4e-14 82.8 97 52.6
Gorai.003G006300 Gossypium raimondii HOM05D000476 ORTHO05D005719 2.4e-14 82.8 97 52.6
Manes.01G150500 Manihot esculenta HOM05D000476 ORTHO05D005719 3.1e-14 82.4 109 45.9
Manes.02G109900 Manihot esculenta HOM05D000476 ORTHO05D005719 3.1e-14 82.4 115 41.7
CiPaw.05G084600 Carya illinoinensis HOM05D000476 ORTHO05D005719 5.3e-14 81.6 100 49.0
Potri.005G108400 Populus trichocarpa HOM05D000476 ORTHO05D005719 6.9e-14 81.3 118 46.6
Atru.chr5.3386 Acer truncatum HOM05D000476 ORTHO05D005719 1.5e-13 80.1 63 68.3
HPP92_020729 Vanilla planifolia HOM05D000476 ORTHO05D005719 2.0e-13 79.7 88 53.4
AUR62010017 Chenopodium quinoa HOM05D000476 ORTHO05D005719 5.8e-13 78.2 101 48.5
Sabra05G0088800 Salix brachista HOM05D000476 ORTHO05D005719 1.7e-12 76.6 116 46.6
CANSAT01G2246 Cannabis sativa HOM05D000476 ORTHO05D005719 2.2e-12 76.3 96 51.0
Haze_03708 Corylus avellana HOM05D000476 ORTHO05D005719 4.9e-12 75.1 85 55.3
Cpa.g.sc6.308 Carica papaya HOM05D000476 ORTHO05D005719 1.6e-10 70.1 105 43.8
CDE09G0394 Ceratophyllum demersum HOM05D000476 ORTHO05D005719 1.6e-10 70.1 112 45.5
Lsat_1_v5_gn_4_144401 Lactuca sativa HOM05D000476 ORTHO05D005719 1.6e-10 70.1 61 60.7
Hma1.2p1_0561F.1_g178970 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 2.7e-10 69.3 83 51.8
HanXRQChr09g0257241 Helianthus annuus HOM05D000476 ORTHO05D005719 7.9e-10 67.8 48 68.8
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 3.0e-09 65.9 65 52.3
Hund14172 Selenicereus undatus HOM05D000476 ORTHO05D005719 1.5e-08 63.5 82 46.3
EL10Ac6g13329 Beta vulgaris HOM05D000476 ORTHO05D005719 1.9e-08 63.2 61 52.5
Lj2A484T43 Lonicera japonica HOM05D000476 ORTHO05D005719 1.3e-07 60.5 104 41.3
Prupe.7G174400 Prunus persica HOM05D000476 ORTHO05D005719 6.2e-07 58.2 105 41.0
Zm00001eb331740 Zea mays HOM05D000476 ORTHO05D005719 1.1e-06 57.4 53 50.9
AUR62026229 Chenopodium quinoa HOM05D000476 ORTHO05D005719 1.4e-06 57.0 107 35.5
Atru.chr3.902 Acer truncatum HOM05D000476 ORTHO05D005719 1.8e-06 56.6 49 59.2


User provided reference genes

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