Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19716 Striga asiatica HOM05D000476 ORTHO05D029332 1.6e-68 262.7 135 100.0
SGA_v2.0_scaffold143G35762 Striga asiatica HOM05D000476 ORTHO05D029332 1.4e-48 196.4 134 79.1
SGA_v2.0_scaffold58G20351 Striga asiatica HOM05D000476 ORTHO05D005719 5.6e-34 147.9 133 66.2
Oeu029648.1 Olea europaea HOM05D000476 ORTHO05D005719 4.9e-30 134.8 139 56.1
Migut.B00063 Erythranthe guttata HOM05D000476 ORTHO05D005719 9.3e-29 130.6 136 56.6
MSTRG.16926 Avicennia marina HOM05D000476 ORTHO05D005719 2.7e-28 129.0 137 57.7
Actinidia20522 Actinidia chinensis HOM05D000476 ORTHO05D005719 7.3e-26 120.9 130 54.6
Nn5g30832 Nelumbo nucifera HOM05D000476 ORTHO05D005719 1.3e-25 120.2 120 58.3
SalBow1G8296 Salvia bowleyana HOM05D000476 ORTHO05D005719 1.3e-25 120.2 139 54.0
Haze_02112 Corylus avellana HOM05D000476 ORTHO05D005719 1.6e-25 119.8 136 55.9
Actinidia18045 Actinidia chinensis HOM05D000476 ORTHO05D005719 2.8e-25 119.0 130 53.8
unitig_0.g814 Utricularia gibba HOM05D000476 ORTHO05D005719 6.2e-25 117.9 139 53.2
CiPaw.05G084600 Carya illinoinensis HOM05D000476 ORTHO05D005719 8.1e-25 117.5 135 54.8
PSO170G5898 Papaver somniferum HOM05D000476 ORTHO05D005719 1.8e-24 116.3 136 51.5
Nn6g31926 Nelumbo nucifera HOM05D000476 ORTHO05D005719 2.4e-24 115.9 121 59.5
Cfa005281 Carpinus fangiana HOM05D000476 ORTHO05D005719 4.0e-24 115.2 135 54.8
Duzib248G0030 Durio zibethinus HOM05D000476 ORTHO05D005719 5.3e-24 114.8 132 51.5
Hma1.2p1_0163F.1_g072630 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 5.3e-24 114.8 141 49.6
QL11p051500 Quercus lobata HOM05D000476 ORTHO05D005719 6.9e-24 114.4 136 50.7
Thecc.02G056200 Theobroma cacao HOM05D000476 ORTHO05D005719 1.2e-23 113.6 133 50.4
PSO210G5945 Papaver somniferum HOM05D000476 ORTHO05D005719 2.6e-23 112.5 142 49.3
vmacro02286 Vaccinium macrocarpon HOM05D000476 ORTHO05D005719 2.6e-23 112.5 136 51.5
Duzib132G1235 Durio zibethinus HOM05D000476 ORTHO05D005719 4.5e-23 111.7 131 52.7
Dinv41922 Davidia involucrata HOM05D000476 ORTHO05D005719 9.9e-23 110.5 130 53.8
Aqoxy5G01114 Aquilegia oxysepala HOM05D000476 ORTHO05D005719 1.3e-22 110.2 123 53.7
Potri.009G137500 Populus trichocarpa HOM05D000476 ORTHO05D005719 1.7e-22 109.8 137 51.1
Cc09_g10250 Coffea canephora HOM05D000476 ORTHO05D005719 2.2e-22 109.4 133 52.6
Sopen01g053780 Solanum pennellii HOM05D000476 ORTHO05D005719 2.2e-22 109.4 143 50.3
DCAR_022959 Daucus carota HOM05D000476 ORTHO05D005719 2.9e-22 109.0 125 53.6
Ah.01g008190 Amaranthus hybridus HOM05D000476 ORTHO05D005719 3.8e-22 108.6 130 49.2
Sabra09G0106700 Salix brachista HOM05D000476 ORTHO05D005719 3.8e-22 108.6 137 52.6
Rhsim11G0193200 Rhododendron simsii HOM05D000476 ORTHO05D005719 4.9e-22 108.2 142 54.2
Ciclev10030360m.g Citrus clementina HOM05D000476 ORTHO05D005719 6.4e-22 107.8 137 48.2
QL06p051967 Quercus lobata HOM05D000476 ORTHO05D005719 1.1e-21 107.1 125 56.0
Solyc01g111740.3 Solanum lycopersicum HOM05D000476 ORTHO05D005719 1.4e-21 106.7 143 50.3
CSS0012841 Camellia sinensis var. sinensis HOM05D000476 ORTHO05D005719 2.4e-21 105.9 131 51.9
Potri.004G177200 Populus trichocarpa HOM05D000476 ORTHO05D005719 2.4e-21 105.9 137 51.1
Peaxi162Scf00362g00535 Petunia axillaris HOM05D000476 ORTHO05D005719 4.2e-21 105.1 146 47.9
PGSC0003DMG400018042 Solanum tuberosum HOM05D000476 ORTHO05D005719 4.2e-21 105.1 146 48.6
TPR.G2450 Trifolium pratense HOM05D000476 ORTHO05D005719 4.2e-21 105.1 123 55.3
TAR381G1494 Trochodendron aralioides HOM05D000476 ORTHO05D005719 4.2e-21 105.1 122 54.1
FvH4_1g11140 Fragaria vesca HOM05D000476 ORTHO05D005719 5.4e-21 104.8 122 53.3
FAN19G2503 Fragaria x ananassa HOM05D000476 ORTHO05D005719 5.4e-21 104.8 122 53.3
Lsat_1_v5_gn_4_71841 Lactuca sativa HOM05D000476 ORTHO05D005719 5.4e-21 104.8 134 53.0
Thecc.02G056700 Theobroma cacao HOM05D000476 ORTHO05D029332 5.4e-21 104.8 132 47.7
TPR.G2472 Trifolium pratense HOM05D000476 ORTHO05D005719 5.4e-21 104.8 123 55.3
TAR233G0001 Trochodendron aralioides HOM05D000476 ORTHO05D005719 7.1e-21 104.4 122 54.1
Haze_03708 Corylus avellana HOM05D000476 ORTHO05D005719 9.3e-21 104.0 118 55.9
Phvul.007G018200 Phaseolus vulgaris HOM05D000476 ORTHO05D005719 1.2e-20 103.6 124 54.8
Manes.02G109900 Manihot esculenta HOM05D000476 ORTHO05D005719 1.6e-20 103.2 121 51.2
FAN28G1417 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.7e-20 102.4 120 52.5
Lj9A397G33 Lonicera japonica HOM05D000476 ORTHO05D005719 2.7e-20 102.4 142 48.6
Lj9C400T3 Lonicera japonica HOM05D000476 ORTHO05D005719 2.7e-20 102.4 142 48.6
Nitab4.5_0003698g0070 Nicotiana tabacum HOM05D000476 ORTHO05D005719 2.7e-20 102.4 146 45.2
FAN23G2355 Fragaria x ananassa HOM05D000476 ORTHO05D005719 3.5e-20 102.1 120 52.5
Glyma.20G106700 Glycine max HOM05D000476 ORTHO05D005719 3.5e-20 102.1 125 53.6
Glyma.10G283000 Glycine max HOM05D000476 ORTHO05D005719 4.6e-20 101.7 129 52.7
Medtr1g112850 Medicago truncatula HOM05D000476 ORTHO05D005719 4.6e-20 101.7 137 51.1
FAN26G0730 Fragaria x ananassa HOM05D000476 ORTHO05D005719 6.0e-20 101.3 120 52.5
Gohir.A01G170100 Gossypium hirsutum HOM05D000476 ORTHO05D005719 6.0e-20 101.3 139 46.0
Gohir.D01G161200 Gossypium hirsutum HOM05D000476 ORTHO05D005719 6.0e-20 101.3 139 46.0
Gorai.002G199800 Gossypium raimondii HOM05D000476 ORTHO05D005719 6.0e-20 101.3 139 46.0
Nitab4.5_0004864g0010 Nicotiana tabacum HOM05D000476 ORTHO05D005719 6.0e-20 101.3 143 46.9
Psat6g232560 Pisum sativum HOM05D000476 ORTHO05D005719 7.9e-20 100.9 140 47.9
Ca_03300_v3 Cicer arietinum L. HOM05D000476 ORTHO05D005719 1.0e-19 100.5 128 48.4
TWI75G0421 Tripterygium wilfordii HOM05D000476 ORTHO05D005719 1.0e-19 100.5 135 48.9
CAN.G588.95 Capsicum annuum HOM05D000476 ORTHO05D005719 1.3e-19 100.1 138 49.3
Prupe.7G174500 Prunus persica HOM05D000476 ORTHO05D005719 1.3e-19 100.1 129 48.8
Sabra04G0119100 Salix brachista HOM05D000476 ORTHO05D005719 1.3e-19 100.1 140 47.1
Hma1.2p1_0561F.1_g178970 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 1.8e-19 99.8 122 53.3
CANSAT25G2378 Cannabis sativa HOM05D000476 ORTHO05D005719 2.3e-19 99.4 134 50.7
AUR62013007 Chenopodium quinoa HOM05D000476 ORTHO05D005719 2.3e-19 99.4 136 47.8
TWI31G0618 Tripterygium wilfordii HOM05D000476 ORTHO05D005719 3.0e-19 99.0 136 49.3
VMungo0720G1528 Vigna mungo HOM05D000476 ORTHO05D005719 3.0e-19 99.0 128 51.6
Sabra05G0088800 Salix brachista HOM05D000476 ORTHO05D005719 3.9e-19 98.6 121 52.9
AUR62010017 Chenopodium quinoa HOM05D000476 ORTHO05D005719 5.1e-19 98.2 128 48.4
ClCG02G012060 Citrullus lanatus HOM05D000476 ORTHO05D005719 6.7e-19 97.8 125 50.4
Dinv14122 Davidia involucrata HOM05D000476 ORTHO05D005719 1.1e-18 97.1 121 52.1
Manes.01G150500 Manihot esculenta HOM05D000476 ORTHO05D005719 1.1e-18 97.1 122 50.0
Potri.005G108400 Populus trichocarpa HOM05D000476 ORTHO05D005719 1.1e-18 97.1 121 52.1
Sed0002256 Sechium edule HOM05D000476 ORTHO05D005719 1.5e-18 96.7 128 52.3
Ah.01g023180 Amaranthus hybridus HOM05D000476 ORTHO05D005719 1.9e-18 96.3 109 50.5
CsaV3_2G016220 Cucumis sativus L. HOM05D000476 ORTHO05D005719 1.9e-18 96.3 125 48.0
HanXRQChr10g0300811 Helianthus annuus HOM05D000476 ORTHO05D005719 1.9e-18 96.3 131 48.9
PGR142G3087 Punica granatum HOM05D000476 ORTHO05D005719 1.9e-18 96.3 143 45.5
MELO3C020830.2 Cucumis melo HOM05D000476 ORTHO05D005719 2.5e-18 95.9 125 48.0
Manes.04G071400 Manihot esculenta HOM05D000476 ORTHO05D005719 2.5e-18 95.9 147 46.9
Cfa007026 Carpinus fangiana HOM05D000476 ORTHO05D005719 3.3e-18 95.5 118 53.4
Eucgr.J00964 Eucalyptus grandis HOM05D000476 ORTHO05D029332 5.6e-18 94.7 110 52.7
FvH4_2g15580 Fragaria vesca HOM05D000476 ORTHO05D005719 5.6e-18 94.7 132 47.7
MD10G1127200 Malus domestica HOM05D000476 ORTHO05D005719 5.6e-18 94.7 136 48.5
Thecc.01G012000 Theobroma cacao HOM05D000476 ORTHO05D005719 5.6e-18 94.7 118 47.5
arahy.Tifrunner.gnm1.ann1.FXE6P8 Arachis hypogaea HOM05D000476 ORTHO05D005719 1.3e-17 93.6 153 43.8
FAN24G1070 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.6e-17 93.2 132 47.7
Lalb_Chr21g0307031 Lupinus albus HOM05D000476 ORTHO05D005719 4.8e-17 91.7 137 46.0
RcHm_v2.0_Chr6g0278761 Rosa chinensis HOM05D000476 ORTHO05D005719 4.8e-17 91.7 136 46.3
Dinv40142 Davidia involucrata HOM05D000476 ORTHO05D005719 6.2e-17 91.3 126 47.6
Prupe.8G168100 Prunus persica HOM05D000476 ORTHO05D005719 8.1e-17 90.9 140 45.7
RcHm_v2.0_Chr2g0098421 Rosa chinensis HOM05D000476 ORTHO05D005719 8.1e-17 90.9 118 50.0
Duzib147G1555 Durio zibethinus HOM05D000476 ORTHO05D005719 1.1e-16 90.5 117 44.4
EL10Ac9g21346 Beta vulgaris HOM05D000476 ORTHO05D005719 1.4e-16 90.1 130 50.8
Gohir.A02G173900 Gossypium hirsutum HOM05D000476 ORTHO05D005719 4.0e-16 88.6 131 45.8
Gohir.D03G005900 Gossypium hirsutum HOM05D000476 ORTHO05D005719 4.0e-16 88.6 123 45.5
Gorai.003G006300 Gossypium raimondii HOM05D000476 ORTHO05D005719 4.0e-16 88.6 123 45.5
MD05G1124400 Malus domestica HOM05D000476 ORTHO05D005719 4.0e-16 88.6 143 44.8
THA.LOC104804321 Tarenaya hassleriana HOM05D000476 ORTHO05D005719 4.0e-16 88.6 136 41.2
ATR0661G123 Amborella trichopoda HOM05D000476 ORTHO05D005719 5.3e-16 88.2 121 43.0
Lj5g0010360 Lotus japonicus HOM05D000476 ORTHO05D005719 5.3e-16 88.2 129 48.1
Sed0017619 Sechium edule HOM05D000476 ORTHO05D005719 6.9e-16 87.8 120 49.2
Eucgr.I01453 Eucalyptus grandis HOM05D000476 ORTHO05D005719 9.0e-16 87.4 57 71.9
COL.COLO4_22490 Corchorus olitorius HOM05D000476 ORTHO05D005719 1.2e-15 87.0 123 44.7
Hund06447 Selenicereus undatus HOM05D000476 ORTHO05D005719 1.2e-15 87.0 142 45.8
Cpa.g.sc20.106 Carica papaya HOM05D000476 ORTHO05D005719 1.5e-15 86.7 150 40.7
arahy.Tifrunner.gnm1.ann1.5E9YX9 Arachis hypogaea HOM05D000476 ORTHO05D005719 2.0e-15 86.3 158 39.9
FAN27G1175 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.0e-15 86.3 136 43.4
Atru.chr5.3386 Acer truncatum HOM05D000476 ORTHO05D005719 4.5e-15 85.1 128 43.0
HPP92_020729 Vanilla planifolia HOM05D000476 ORTHO05D005719 4.5e-15 85.1 125 43.2
CANSAT01G2246 Cannabis sativa HOM05D000476 ORTHO05D005719 9.9e-15 84.0 125 44.0
FAN15G2981 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.3e-14 83.6 136 44.9
FAN20G0044 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.3e-14 83.6 136 44.9
SGA_v2.0_scaffold241G44210 Striga asiatica HOM05D000476 ORTHO05D028872 2.9e-14 82.4 51 88.2
ECA234G3651 Erigeron canadensis HOM05D000476 ORTHO05D005719 4.9e-14 81.6 150 40.7
Cpa.g.sc6.308 Carica papaya HOM05D000476 ORTHO05D005719 1.1e-13 80.5 115 45.2
CDE09G0394 Ceratophyllum demersum HOM05D000476 ORTHO05D005719 1.9e-13 79.7 122 43.4
CDE02G2797 Ceratophyllum demersum HOM05D000476 ORTHO05D005719 4.2e-13 78.6 132 40.2
Sc18g0006370 Simmondsia chinensis HOM05D000476 ORTHO05D005719 4.2e-13 78.6 117 41.9
GSVIVG01023992001 Vitis vinifera HOM05D000476 ORTHO05D005719 7.1e-13 77.8 53 67.9
GSVIVG01005188001 Vitis vinifera HOM05D000476 ORTHO05D005719 3.9e-11 72.0 127 36.2
GSVIVG01006889001 Vitis vinifera HOM05D000476 ORTHO05D005719 3.9e-11 72.0 127 36.2
Lj2A484T43 Lonicera japonica HOM05D000476 ORTHO05D005719 8.7e-11 70.9 104 42.3
SEGI_17897 Sequoiadendron giganteum HOM05D000476 ORTHO05D005719 1.9e-10 69.7 169 31.4
MD02G1014200 Malus domestica HOM05D000476 ORTHO05D005719 4.8e-09 65.1 102 41.2
VMungo0540G2247 Vigna mungo HOM05D002022 ORTHO05D010195 2.4e-08 62.8 79 44.3
EL10Ac6g13329 Beta vulgaris HOM05D000476 ORTHO05D005719 2.6e-07 59.3 45 60.0
GSVIVG01010901001 Vitis vinifera HOM05D000476 ORTHO05D004987 4.5e-07 58.5 121 31.4
MD15G1238000 Malus domestica HOM05D000476 ORTHO05D246335 1.3e-06 57.0 71 45.1
MD10G1248400 Malus domestica HOM05D000476 ORTHO05D245651 2.9e-06 55.8 122 32.8
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 6.5e-06 54.7 112 38.4


User provided reference genes

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