Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 4.1e-153 544.7 267 100.0
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 5.7e-54 215.3 285 48.4
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 7.6e-51 204.9 276 46.0
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 4.2e-49 199.1 236 50.8
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 9.3e-49 198.0 295 44.4
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 3.3e-46 189.5 276 42.8
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 2.2e-45 186.8 272 46.7
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 4.1e-44 182.6 293 43.0
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 2.6e-43 179.9 283 42.4
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 1.3e-42 177.6 257 42.4
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 1.3e-42 177.6 299 41.5
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.8e-42 176.0 239 44.4
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 1.9e-41 173.7 279 43.4
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 7.2e-41 171.8 245 44.1
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 1.2e-40 171.0 266 41.4
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.6e-40 170.6 282 41.5
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 1.6e-40 170.6 270 41.1
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 3.6e-40 169.5 276 42.0
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 3.6e-40 169.5 260 41.5
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 4.6e-40 169.1 289 37.4
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 1.0e-39 167.9 281 40.6
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.8e-39 167.2 276 41.7
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 2.3e-39 166.8 283 41.3
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 3.0e-39 166.4 285 41.8
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 3.0e-39 166.4 250 43.6
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 5.1e-39 165.6 282 39.0
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 6.7e-39 165.2 287 40.1
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 8.8e-39 164.9 267 41.9
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.5e-38 164.1 289 39.1
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 3.3e-38 162.9 276 41.3
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 4.3e-38 162.5 287 40.8
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 5.7e-38 162.2 286 41.3
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 5.7e-38 162.2 280 40.4
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 7.4e-38 161.8 262 42.4
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 9.7e-38 161.4 275 43.3
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 9.7e-38 161.4 232 44.0
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.7e-37 160.6 264 41.7
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.7e-37 160.6 284 41.9
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 1.7e-37 160.6 272 39.7
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 2.8e-37 159.8 283 40.3
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 8.2e-37 158.3 274 40.1
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 8.2e-37 158.3 249 43.4
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 1.4e-36 157.5 285 37.9
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.4e-36 157.5 279 38.7
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 1.8e-36 157.1 297 39.4
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 2.4e-36 156.8 288 39.2
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 4.1e-36 156.0 284 40.5
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 5.3e-36 155.6 287 39.4
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 5.3e-36 155.6 267 39.3
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 6.9e-36 155.2 281 38.4
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 6.9e-36 155.2 252 41.3
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 9.1e-36 154.8 253 43.1
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 1.2e-35 154.5 281 38.1
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 1.5e-35 154.1 295 35.9
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 1.5e-35 154.1 288 36.8
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 2.0e-35 153.7 293 37.9
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.4e-35 152.9 292 39.0
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 3.4e-35 152.9 246 41.9
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 7.7e-35 151.8 284 40.8
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 1.3e-34 151.0 279 41.2
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 1.7e-34 150.6 283 38.5
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 2.2e-34 150.2 214 42.5
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 2.2e-34 150.2 305 39.0
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 2.9e-34 149.8 279 36.9
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 6.5e-34 148.7 309 37.9
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 6.5e-34 148.7 283 38.5
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 6.5e-34 148.7 282 38.7
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 8.5e-34 148.3 243 41.6
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.4e-33 147.5 230 42.6
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 1.4e-33 147.5 285 35.1
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.9e-33 147.1 305 38.7
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 1.9e-33 147.1 291 37.1
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.9e-33 147.1 290 38.3
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 2.5e-33 146.7 288 36.8
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 4.2e-33 146.0 240 38.8
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 5.5e-33 145.6 280 37.9
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 7.2e-33 145.2 275 38.9
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 9.4e-33 144.8 276 36.6
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.2e-32 144.4 248 39.9
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 1.2e-32 144.4 276 36.6
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.6e-32 144.1 281 37.7
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 1.6e-32 144.1 288 36.8
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 2.1e-32 143.7 225 39.6
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 2.1e-32 143.7 276 36.6
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 2.7e-32 143.3 278 36.0
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 2.7e-32 143.3 236 41.1
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 2.7e-32 143.3 263 38.8
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 7.9e-32 141.7 228 42.1
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 1.0e-31 141.4 286 36.4
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 1.0e-31 141.4 243 39.9
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 1.0e-31 141.4 276 36.6
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 1.8e-31 140.6 228 41.7
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 2.3e-31 140.2 280 35.7
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 3.0e-31 139.8 282 35.5
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 5.1e-31 139.0 283 36.7
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 6.7e-31 138.7 293 35.5
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 6.7e-31 138.7 291 35.7
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 8.8e-31 138.3 281 37.0
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 1.1e-30 137.9 289 37.4
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.5e-30 137.5 243 38.3
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 1.5e-30 137.5 284 36.6
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 2.0e-30 137.1 284 37.3
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 2.6e-30 136.7 272 37.9
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.3e-30 136.3 283 37.5
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 5.7e-30 135.6 284 37.0
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 5.7e-30 135.6 256 38.3
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 7.4e-30 135.2 260 39.2
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 7.4e-30 135.2 280 36.1
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 9.7e-30 134.8 283 37.1
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 9.7e-30 134.8 284 38.0
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.3e-29 134.4 283 36.4
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 1.3e-29 134.4 296 36.1
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.3e-29 134.4 232 39.2
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 1.7e-29 134.0 228 39.9
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 1.7e-29 134.0 228 39.9
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.2e-29 133.7 284 37.3
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 2.2e-29 133.7 282 36.5
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 2.8e-29 133.3 262 34.7
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 4.8e-29 132.5 232 40.5
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 4.8e-29 132.5 232 40.5
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 4.8e-29 132.5 283 36.7
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 6.3e-29 132.1 269 36.8
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 8.2e-29 131.7 280 36.1
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.4e-28 131.0 287 35.9
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 4.1e-28 129.4 277 37.9
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 5.3e-28 129.0 276 33.3
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 1.2e-27 127.9 223 37.2
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 1.6e-27 127.5 266 33.5
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 2.6e-27 126.7 272 37.5
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 1.7e-26 124.0 269 34.2
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 1.7e-26 124.0 278 33.8
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 5.0e-26 122.5 268 34.3
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 6.5e-26 122.1 259 35.9
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 6.5e-26 122.1 230 36.1
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.1e-25 121.3 272 34.2
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 5.5e-25 119.0 265 33.6
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 9.4e-25 118.2 260 33.8
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 9.4e-25 118.2 269 34.6
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 1.2e-24 117.9 242 35.1
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 1.2e-24 117.9 236 36.4
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 6.7e-23 112.1 265 33.2
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 1.1e-22 111.3 266 32.7
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 1.1e-22 111.3 266 32.7
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 2.0e-22 110.5 269 33.8
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 2.0e-22 110.5 263 34.6
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 3.3e-22 109.8 263 33.1
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 5.7e-22 109.0 236 34.7
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 3.7e-21 106.3 254 34.6
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 8.2e-21 105.1 223 35.0
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 1.4e-20 104.4 276 33.3
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 2.4e-20 103.6 228 34.6
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 4.1e-20 102.8 87 51.7
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 2.7e-19 100.1 225 35.6
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.0e-18 98.2 108 49.1
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.7e-18 97.4 80 55.0
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 2.2e-18 97.1 215 33.5
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 3.8e-18 96.3 232 33.2
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 6.5e-18 95.5 251 33.1
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 6.5e-18 95.5 241 34.0
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 1.9e-17 94.0 117 40.2
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 1.9e-17 94.0 206 33.0
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 1.6e-16 90.9 247 31.6
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 2.1e-16 90.5 274 32.1
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 3.0e-15 86.7 276 27.5
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 4.4e-14 82.8 220 30.5
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 8.3e-13 78.6 226 28.3
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 7.0e-12 75.5 92 48.9
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 9.1e-12 75.1 346 24.0
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 1.6e-11 74.3 175 30.3
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 5.9e-11 72.4 264 29.5
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 1.0e-10 71.6 272 26.8
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 1.0e-10 71.6 255 27.1
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 2.2e-10 70.5 184 28.8
SEGI_37364 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 3.6e-08 63.2 234 27.4
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 6.1e-08 62.4 117 34.2
Os07g0418200 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 3.0e-07 60.1 215 27.9
SGA_v2.0_scaffold55G19709 Striga asiatica HOM05D012578 ORTHO05D009454 1.2e-06 58.2 37 83.8
SMO112G0035 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 7.5e-06 55.5 57 42.1


User provided reference genes

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