Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 1.3e-238 829.3 423 100.0
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 1.2e-146 523.9 437 63.2
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 1.3e-132 477.2 446 57.8
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 1.7e-132 476.9 440 58.9
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 3.1e-131 472.6 444 58.3
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 4.1e-131 472.2 439 58.5
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 6.9e-131 471.5 447 58.6
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 4.5e-130 468.8 445 57.5
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 7.7e-130 468.0 426 59.4
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.4e-128 463.8 438 57.3
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 9.4e-128 461.1 437 57.4
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 1.6e-127 460.3 424 59.4
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 2.1e-127 459.9 430 58.1
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 3.6e-127 459.1 456 56.8
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 4.7e-127 458.8 430 58.6
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 1.0e-126 457.6 433 58.2
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 3.9e-126 455.7 433 57.0
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 1.1e-125 454.1 432 58.1
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.5e-125 453.8 444 56.5
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 1.5e-125 453.8 435 57.5
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 2.0e-125 453.4 431 57.8
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 4.4e-125 452.2 442 56.3
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 2.2e-124 449.9 454 55.5
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 9.1e-123 444.5 439 57.4
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 4.5e-122 442.2 428 57.7
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 8.5e-121 438.0 428 57.0
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 3.9e-118 429.1 443 55.5
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 2.2e-116 423.3 440 55.2
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 1.4e-115 420.6 425 54.1
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 6.5e-113 411.8 425 52.2
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 8.8e-110 401.4 436 53.4
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 1.8e-107 393.7 420 50.5
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 5.9e-106 388.7 423 50.4
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 6.5e-105 385.2 423 49.6
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 2.5e-104 383.3 438 50.7
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 5.5e-104 382.1 376 57.4
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 9.4e-104 381.3 447 48.8
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 2.3e-102 376.7 379 53.3
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.2e-98 364.4 347 56.5
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 4.7e-95 352.4 400 49.5
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 2.7e-90 336.7 432 45.8
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 1.5e-88 330.9 388 50.8
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 3.6e-79 299.7 349 50.4
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 5.1e-73 279.3 257 59.5
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 2.6e-69 266.9 259 56.8
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 1.7e-57 227.6 343 44.6
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 4.6e-50 203.0 179 61.5
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 1.6e-47 194.5 234 52.6
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 4.0e-46 189.9 239 46.0
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 4.5e-45 186.4 160 60.6
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 4.5e-45 186.4 145 66.2
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 3.2e-43 180.3 138 65.9
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 1.6e-42 177.9 187 55.1
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 5.1e-41 172.9 222 50.0
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 2.1e-39 167.5 143 58.0
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 2.0e-29 134.4 331 29.6
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 7.6e-29 132.5 172 47.7
Ca_29048_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.8e-17 94.7 111 42.3
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 7.9e-10 69.3 61 52.5
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.8e-09 68.2 240 30.0
Sopen06g001050 Solanum pennellii HOM05D008293 ORTHO05D023155 5.7e-08 63.2 85 41.2


User provided reference genes

Program Settings