Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 3.5e-101 371.7 196 100.0
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 7.0e-70 267.7 194 72.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 5.0e-68 261.5 197 70.1
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 9.9e-64 247.3 192 68.8
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 9.2e-62 240.7 194 64.9
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.7e-60 236.5 195 61.0
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 3.9e-60 235.3 193 60.6
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.3e-59 232.3 193 63.7
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 3.3e-59 232.3 196 61.7
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 4.3e-59 231.9 200 64.5
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 9.5e-59 230.7 192 62.5
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.2e-58 230.3 198 58.6
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.4e-57 226.9 192 60.4
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.8e-57 226.5 192 60.9
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 3.1e-57 225.7 191 60.7
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 4.0e-57 225.3 191 60.2
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 5.8e-56 221.5 194 58.8
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 7.6e-56 221.1 191 59.2
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.3e-55 220.3 186 61.8
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 2.2e-55 219.5 195 59.5
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.4e-55 217.6 197 57.9
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.1e-54 217.2 193 59.1
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 9.2e-54 214.2 197 61.4
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.2e-53 213.8 198 56.6
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 2.1e-53 213.0 196 61.7
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 2.7e-53 212.6 233 52.4
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 4.6e-53 211.8 201 56.7
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 6.0e-53 211.5 191 57.6
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 7.8e-53 211.1 198 55.6
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 7.8e-53 211.1 190 57.9
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.7e-52 209.9 194 54.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 3.0e-52 209.1 196 56.1
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.9e-52 208.8 197 57.4
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 5.1e-52 208.4 191 58.1
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.6e-52 208.0 196 57.7
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.1e-51 207.2 192 58.9
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.5e-51 206.8 194 55.2
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-51 206.5 197 56.9
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.9e-51 206.5 192 58.9
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.5e-51 206.1 195 56.4
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 3.3e-51 205.7 194 58.8
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 4.3e-51 205.3 195 55.4
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 5.6e-51 204.9 195 54.9
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.3e-51 204.5 196 57.1
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 7.3e-51 204.5 198 56.1
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 9.6e-51 204.1 190 59.5
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.6e-50 203.4 194 54.1
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 2.1e-50 203.0 193 57.5
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 4.7e-50 201.8 139 66.9
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.4e-49 200.3 191 56.5
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.4e-49 200.3 199 54.8
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.8e-49 199.9 202 55.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 3.1e-49 199.1 195 56.4
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.1e-49 199.1 189 58.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 3.1e-49 199.1 189 58.2
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 5.3e-49 198.4 191 55.0
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 5.3e-49 198.4 190 56.8
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 5.3e-49 198.4 192 53.6
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 6.9e-49 198.0 194 54.1
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 9.0e-49 197.6 199 52.8
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 9.0e-49 197.6 196 55.6
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 9.0e-49 197.6 189 58.2
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.2e-48 197.2 195 55.4
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 2.6e-48 196.1 191 56.5
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 2.6e-48 196.1 196 56.6
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 3.4e-48 195.7 197 51.8
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 4.4e-48 195.3 191 55.0
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 4.4e-48 195.3 194 53.1
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 5.8e-48 194.9 207 51.7
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 9.9e-48 194.1 197 54.8
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.7e-47 193.4 189 51.9
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 8.4e-47 191.0 194 55.2
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 8.4e-47 191.0 194 55.2
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 1.1e-46 190.7 191 53.4
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 1.9e-46 189.9 196 54.6
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.4e-46 189.5 170 57.1
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 4.2e-46 188.7 191 55.0
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 4.2e-46 188.7 190 53.7
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 5.4e-46 188.3 191 53.9
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 7.1e-46 188.0 198 52.0
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.6e-45 186.8 192 53.1
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 3.5e-45 185.7 190 52.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 4.6e-45 185.3 202 51.5
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 6.0e-45 184.9 190 52.1
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.0e-44 184.1 196 51.5
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.0e-44 184.1 196 51.5
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.0e-44 184.1 196 51.5
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.7e-44 183.3 195 54.4
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-43 180.6 197 53.8
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.1e-43 180.6 197 53.8
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.9e-43 179.9 190 50.0
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 7.3e-43 177.9 111 77.5
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 7.3e-43 177.9 131 63.4
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 2.1e-42 176.4 190 52.1
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.2e-42 174.9 115 69.6
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.5e-40 170.2 125 60.8
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 3.4e-40 169.1 199 45.2
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 5.8e-40 168.3 131 65.6
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.7e-39 166.8 114 66.7
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 3.8e-39 165.6 179 50.8
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 3.8e-39 165.6 193 48.2
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.4e-38 162.9 179 50.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.7e-37 159.5 124 58.9
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 8.7e-36 154.5 212 48.6
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 2.5e-35 152.9 185 48.1
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 9.6e-35 151.0 197 44.2
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.3e-34 150.6 125 61.6
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 7.1e-30 134.8 193 39.4
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.8e-28 130.2 93 61.3
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.1e-27 127.5 97 57.7
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.1e-27 127.5 81 71.6
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 4.3e-27 125.6 194 39.7
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.8e-26 122.9 99 54.5
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.1e-25 120.9 133 58.6
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.1e-25 120.9 181 40.9
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 8.4e-23 111.3 66 74.2
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.0e-20 104.4 110 51.8
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.2e-16 90.9 114 38.6
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 1.0e-15 87.8 120 40.8
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 8.5e-15 84.7 119 37.0
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 1.4e-12 77.4 108 49.1
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.8e-12 77.0 133 33.1
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 6.7e-12 75.1 105 46.7
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.1e-09 65.9 100 46.0
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 5.5e-06 55.5 39 69.2
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 5.5e-06 55.5 39 66.7


User provided reference genes

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