Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19693 Striga asiatica HOM05D020753 ORTHO05D404249 2.4e-78 295.4 151 100.0
SGA_v2.0_scaffold37G14844 Striga asiatica HOM05D020753 ORTHO05D403803 2.6e-56 222.2 125 90.4
SGA_v2.0_scaffold12G06195 Striga asiatica HOM05D020753 ORTHO05D401615 1.9e-38 162.9 115 80.0
SGA_v2.0_scaffold7G03789 Striga asiatica HOM05D024773 ORTHO05D405707 1.5e-24 116.7 143 50.3
SGA_v2.0_scaffold61G21162 Striga asiatica HOM05D020753 ORTHO05D404919 1.0e-23 114.0 64 87.5
SGA_v2.0_scaffold42G16075 Striga asiatica HOM05D020753 ORTHO05D405316 1.8e-20 103.2 68 85.3
SGA_v2.0_scaffold102G29902 Striga asiatica HOM05D024773 ORTHO05D404664 3.3e-19 99.0 116 55.2
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 2.8e-18 95.9 89 57.3
Migut.H02415 Erythranthe guttata HOM05D000033 ORTHO05D001614 6.3e-18 94.7 89 56.2
SalBow6G1912 Salvia bowleyana HOM05D000033 ORTHO05D001614 2.0e-16 89.7 84 54.8
SalBow6G6313 Salvia bowleyana HOM05D000033 ORTHO05D001614 2.0e-16 89.7 84 54.8
SGA_v2.0_scaffold47G17724 Striga asiatica HOM05D000033 ORTHO05D001614 6.5e-15 84.7 95 51.6
SGA_v2.0_scaffold104G30189 Striga asiatica HOM05D024773 ORTHO05D402345 2.0e-11 73.2 57 70.2
CAN.G267.8 Capsicum annuum HOM05D000033 ORTHO05D001614 1.7e-10 70.1 82 48.8
Oeu002110.2 Olea europaea HOM05D000033 ORTHO05D001614 1.7e-10 70.1 113 39.8
Solyc04g054200.3 Solanum lycopersicum HOM05D000033 ORTHO05D001614 6.3e-10 68.2 94 43.6
Sopen04g023670 Solanum pennellii HOM05D000033 ORTHO05D001614 1.8e-09 66.6 94 42.6
Nitab4.5_0000689g0010 Nicotiana tabacum HOM05D000033 ORTHO05D001614 3.1e-09 65.9 87 44.8
Lj2A560T65 Lonicera japonica HOM05D000033 ORTHO05D001614 9.1e-09 64.3 105 41.0
SGA_v2.0_scaffold51G18735 Striga asiatica HOM05D000033 ORTHO05D001614 9.1e-09 64.3 47 72.3
PGSC0003DMG400012955 Solanum tuberosum HOM05D000033 ORTHO05D001614 1.2e-08 63.9 94 41.5
Cc07_g16010 Coffea canephora HOM05D000033 ORTHO05D001614 2.7e-08 62.8 108 38.9
Nitab4.5_0000156g0130 Nicotiana tabacum HOM05D000033 ORTHO05D001614 3.5e-08 62.4 82 43.9
SGA_v2.0_scaffold216G42384 Striga asiatica HOM05D024773 ORTHO05D401420 1.0e-07 60.8 73 52.1
EL10Ac6g14731 Beta vulgaris HOM05D000033 ORTHO05D001614 1.7e-07 60.1 84 39.3
AUR62003320 Chenopodium quinoa HOM05D000033 ORTHO05D001614 2.2e-07 59.7 97 37.1
SHI11673 Sapria himalayana HOM05D000033 ORTHO05D001614 1.1e-06 57.4 83 42.2
Peaxi162Scf01006g00001 Petunia axillaris HOM05D000033 ORTHO05D001614 1.9e-06 56.6 93 39.8
Psat5g066800 Pisum sativum HOM05D000033 ORTHO05D001614 1.9e-06 56.6 89 39.3
Actinidia33366 Actinidia chinensis HOM05D000033 ORTHO05D001614 2.5e-06 56.2 82 46.3
AUR62016262 Chenopodium quinoa HOM05D000033 ORTHO05D001614 2.5e-06 56.2 97 35.1
Lj1g0003526 Lotus japonicus HOM05D000033 ORTHO05D001614 3.2e-06 55.8 82 45.1
Actinidia08333 Actinidia chinensis HOM05D000033 ORTHO05D013645 7.2e-06 54.7 82 46.3
CSS0001371 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D001614 9.4e-06 54.3 92 40.2


User provided reference genes

Program Settings