Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 2.4e-120 435.6 236 100.0
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 2.9e-102 375.6 244 85.2
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 7.9e-100 367.5 244 82.8
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 3.7e-97 358.6 244 80.3
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 7.6e-95 350.9 317 66.2
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 1.7e-94 349.7 245 78.4
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 3.2e-93 345.5 244 77.5
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 1.3e-91 340.1 244 77.9
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 1.1e-90 337.0 243 76.5
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 1.9e-90 336.3 243 76.1
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.9e-90 336.3 243 77.0
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 5.7e-90 334.7 243 75.3
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 9.6e-90 334.0 244 76.2
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 2.8e-89 332.4 244 75.8
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 8.2e-89 330.9 243 76.5
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 1.1e-88 330.5 243 74.5
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 1.8e-88 329.7 245 75.1
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 1.8e-88 329.7 243 75.3
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 3.1e-88 328.9 243 75.3
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 4.1e-88 328.6 243 75.3
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 9.0e-88 327.4 243 73.3
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 9.0e-88 327.4 243 74.9
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 9.0e-88 327.4 242 74.4
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.2e-87 327.0 243 74.5
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 1.2e-87 327.0 243 74.1
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 2.6e-87 325.9 243 73.3
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 4.5e-87 325.1 243 73.7
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 4.5e-87 325.1 243 75.3
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 7.6e-87 324.3 243 73.3
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 7.6e-87 324.3 243 73.7
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 1.0e-86 323.9 243 74.1
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 1.3e-86 323.6 243 74.1
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 2.2e-86 322.8 243 74.1
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 2.9e-86 322.4 243 72.8
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 2.9e-86 322.4 243 72.8
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 2.9e-86 322.4 243 74.1
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 5.0e-86 321.6 239 75.3
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.1e-85 320.5 243 72.8
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 1.4e-85 320.1 240 76.2
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 1.9e-85 319.7 244 73.8
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 1.9e-85 319.7 217 80.2
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 2.5e-85 319.3 239 73.2
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 7.1e-85 317.8 243 72.0
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 1.2e-84 317.0 243 73.3
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 2.1e-84 316.2 243 72.4
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 2.1e-84 316.2 243 71.2
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 2.7e-84 315.8 243 71.6
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 3.5e-84 315.5 240 74.6
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 4.6e-84 315.1 243 72.0
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 6.1e-84 314.7 243 70.8
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.0e-83 313.9 243 71.6
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 3.0e-83 312.4 244 73.8
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 3.9e-83 312.0 244 73.4
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 3.9e-83 312.0 244 73.4
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 1.1e-82 310.5 243 71.2
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.9e-82 309.7 259 70.3
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 3.3e-82 308.9 243 71.6
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 4.3e-82 308.5 259 70.7
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 2.2e-81 306.2 282 64.9
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 3.7e-81 305.4 243 69.1
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 4.8e-81 305.1 244 70.5
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 4.8e-81 305.1 287 62.0
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 8.2e-81 304.3 243 70.0
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 1.4e-80 303.5 243 68.7
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 1.4e-80 303.5 243 68.7
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.8e-80 303.1 243 71.6
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.8e-80 303.1 284 63.4
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 2.4e-80 302.8 244 70.5
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 5.3e-80 301.6 244 69.3
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 6.9e-80 301.2 243 67.1
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 6.9e-80 301.2 243 66.7
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 6.9e-80 301.2 197 83.2
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 6.9e-80 301.2 244 68.9
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.2e-79 300.4 243 67.1
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.2e-79 300.4 243 67.1
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 1.2e-79 300.4 225 75.1
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 1.5e-79 300.1 243 66.3
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.5e-79 300.1 196 82.7
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 2.0e-79 299.7 244 68.9
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 2.0e-79 299.7 243 67.5
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 2.6e-79 299.3 244 68.0
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 3.4e-79 298.9 222 73.9
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 4.5e-79 298.5 243 66.7
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 7.7e-79 297.7 243 66.7
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 7.7e-79 297.7 244 67.2
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 7.7e-79 297.7 246 65.9
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 1.0e-78 297.4 243 66.7
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 1.7e-78 296.6 248 65.7
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 2.2e-78 296.2 243 66.3
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 2.9e-78 295.8 243 68.7
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 2.9e-78 295.8 246 65.9
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 2.9e-78 295.8 218 73.4
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 2.9e-78 295.8 243 67.5
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 3.8e-78 295.4 243 65.8
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 3.8e-78 295.4 243 65.8
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 3.8e-78 295.4 244 69.7
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 5.0e-78 295.0 243 64.6
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 8.5e-78 294.3 196 80.1
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 8.5e-78 294.3 244 67.6
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 1.4e-77 293.5 222 73.0
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 1.9e-77 293.1 196 79.6
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.5e-77 292.7 243 65.0
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 1.2e-76 290.4 196 80.1
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 1.6e-76 290.0 243 64.2
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 1.6e-76 290.0 245 66.9
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 1.6e-76 290.0 216 72.7
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.6e-76 290.0 243 65.4
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 2.1e-76 289.7 196 78.1
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 2.7e-76 289.3 243 63.4
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 2.7e-76 289.3 243 66.7
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 4.6e-76 288.5 243 65.8
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 7.9e-76 287.7 243 63.4
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.0e-75 287.3 222 70.7
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 5.1e-75 285.0 199 77.9
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 6.7e-75 284.6 199 77.4
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 1.1e-74 283.9 280 60.7
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.1e-74 283.9 199 76.9
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 5.7e-74 281.6 199 76.9
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 7.4e-74 281.2 207 73.9
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 1.3e-73 280.4 292 56.8
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 1.3e-73 280.4 246 67.1
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 8.2e-73 277.7 196 76.0
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 1.4e-72 276.9 225 68.4
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 3.1e-72 275.8 244 63.1
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 6.9e-72 274.6 225 68.0
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 1.5e-71 273.5 244 62.3
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 4.7e-68 261.9 196 68.4
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 9.7e-66 254.2 215 67.9
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 1.3e-62 243.8 175 75.4
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 7.2e-61 238.0 174 73.0
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 5.2e-59 231.9 188 66.5
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 1.3e-57 227.3 244 56.1
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.9e-54 216.1 196 65.3
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 1.2e-52 210.7 155 76.1
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 2.3e-51 206.5 225 55.6
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 1.2e-50 204.1 128 79.7
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 4.0e-43 179.1 155 61.9
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 7.0e-40 168.3 142 64.8
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 4.4e-34 149.1 132 60.6
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 2.9e-33 146.4 216 47.2
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 1.1e-32 144.4 112 71.4
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 9.2e-32 141.4 165 55.2
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 7.3e-29 131.7 216 39.8
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 4.0e-27 125.9 207 36.2
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 9.8e-26 121.3 100 68.0
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 7.0e-24 115.2 208 35.6
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 7.8e-23 111.7 209 43.1
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 5.0e-22 109.0 236 37.7
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 3.1e-19 99.8 64 82.8
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 6.8e-19 98.6 178 34.8
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 1.2e-18 97.8 194 33.5
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 1.3e-17 94.4 72 72.2
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 4.6e-15 85.9 205 40.5
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 1.9e-13 80.5 71 60.6
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 1.1e-11 74.7 64 67.2
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 3.7e-09 66.2 217 29.0
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 7.8e-07 58.5 50 68.0
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 7.8e-07 58.5 40 80.0
C06p01940 Brassica napus HOM05D004411 ORTHO05D032662 3.9e-06 56.2 94 44.7


User provided reference genes

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